Contig 013174:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS133G11Sequence640013174 (2)ref|XP_002535510.1|1e-50hypothetical protein RCOM_2072330 [Ricinus communis] gb|EEF26873.1| hypothetical
JMSF006F13Sequence430013174 (2)ref|XP_010278907.1|5e-19PREDICTED: branched-chain-amino-acid aminotransferase-like protein 1 isoform X2389020288ref|XP_010694625.1|7e-29PREDICTED: LOW QUALITY PROTEIN: branched-chain-amino-acid aminotransferase-like

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS133G11+ TTCATTAAATCATCTGTCAAACCAGGCAAGTTTTGCTTAG
                      ____________________________________________________________
consensus TTCATTAAATCATCTGTCAAACCAGGCAAGTTTTGCTTAG
 
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JMFS133G11+ CTATGTGCTTACAGTACCGATATTTCTTTTCTCCTGGACCAAATATTATATCCTTGACCA
                      ____________________________________________________________
consensus CTATGTGCTTACAGTACCGATATTTCTTTTCTCCTGGACCAAATATTATATCCTTGACCA
 
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JMSF006F13+ TGCTC
JMFS133G11+ CCTTATTTCCATCAGACTCCATAGTCGAAAGAACTTCATCCCTGTAGGGCCTCTCTGCTC
                      ____________________________________________________________
consensus CCTTATTTCCATCAGACTCCATAGTCGAAAGAACTTCATCCCTGTAGGGCCTCTCTGCTC
 
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JMSF006F13+ CAGTTACTTTGAGAAAATGTGCATACAGAGGTTCGTCAAGAACTTCAATATCATCCCTCT
JMFS133G11+ CAGTTACTTTGAGAAAATGTGCATACAGAGGTTCGTCAAGAACTTCAATATCATCCCTCT
                      ____________________________________________________________
consensus CAGTTACTTTGAGAAAATGTGCATACAGAGGTTCGTCAAGAACTTCAATATCATCCCTCT
 
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JMSF006F13+ GAGCAAAGGAATACATAAGGCTGGTACTGAGAGACCTGGGTGCAGACCATGCATGAATCA
JMFS133G11+ GAGCAAAGGAATACATAAGGCTGGTACTGAGAGACCTGGGTGCAGACCATGCATGAATCA
                      ____________________________________________________________
consensus GAGCAAAGGAATACATAAGGCTGGTACTGAGAGACCTGGGTGCAGACCATGCATGAATCA
 
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JMSF006F13+ CTTCAATTTCACATTTGGCTTCTCCCATTTTAGGCTATATTCTGCAGTTCTGATACGAAA
JMFS133G11+ CTTCAATTTCACATTTGGCTTCTCCCATTTTAGGCTATATTCTGCAGTTCTGATACGAAA
                      ____________________________________________________________
consensus CTTCAATTTCACATTTGGCTTCTCCCATTTTAGGCTATATTCTGCAGTTCTGATACGAAA
 
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JMSF006F13+ AAACAGGAATTTGGGTTCTGGCTCCTGAAGAAACTGAGAATTGCTGGGTTTATGAAAATG
JMFS133G11+ AAACAGGAATTTGGGTTCTGGCTCCTGAAGAAACTGAGAATTGCTGGGTTTCTGAAAATG
                      ____________________________________________________________
consensus AAACAGGAATTTGGGTTCTGGCTCCTGAAGAAACTGAGAATTGCTGGGTTTCTGAAAATG
 
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JMSF006F13+ ACGAGTCACAAGTATACACGCAGAGTTTGCTGTAATTATGTAGATTACGCAACCCAAGAT
JMFS133G11+ ACGAGTCACAAGTATACACGCAGAGTTTGCTGTAATTATGTAGATTACGCAACCCAAGAT
                      ____________________________________________________________
consensus ACGAGTCACAAGTATACACGCAGAGTTTGCTGTAATTATGTAGATTACGCAACCCAAGAT
 
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JMSF006F13+ GATAATGTAGATTACGCGAAAAGATGCGTGTAATCCACCAGTTCACGGCATTTCTTTATT
JMFS133G11+ GATAATGTAGATTACGCGAAAAGATGCGTGTAATCCACCAGTTCACGGCATTTCTTTATT
                      ____________________________________________________________
consensus GATAATGTAGATTACGCGAAAAGATGCGTGTAATCCACCAGTTCACGGCATTTCTTTATT
 
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JMSF006F13+ CGCGATTTCGCGCATTCACATGCGTTTTCTGAAATTCGAGAAAATCAGGGGAAAATACTA
JMFS133G11+ CGCGATTTCGCGCATTCACATGCGTTTTCTGAAATTCGAGAAAATCAGGGGAAAATACTA
                      ____________________________________________________________
consensus CGCGATTTCGCGCATTCACATGCGTTTTCTGAAATTCGAGAAAATCAGGGGAAAATACTA
 
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JMSF006F13+ AA
JMFS133G11+ AACGAACGGCAGTTTGTCTACATCGCCCGGGTTTTCACCTTTTCGACATATCAGTTTTGG
                      ____________________________________________________________
consensus AACGAACGGCAGTTTGTCTACATCGCCCGGGTTTTCACCTTTTCGACATATCAGTTTTGG