Contig 013171:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS022F03Sequence627013171 (8)ref|XP_006494897.1|64.3PREDICTED: uncharacterized protein LOC102608118 [Citrus sinensis]
JMFS039E02Sequence621013171 (8)ref|XP_009760053.1|1e-95PREDICTED: transcription factor LHW-like [Nicotiana sylvestris]
JMFS075E02Sequence640013171 (8)ref|XP_009760053.1|1e-97PREDICTED: transcription factor LHW-like [Nicotiana sylvestris]
JMFS129C10Sequence615013171 (8)ref|XP_006494897.1|64.3PREDICTED: uncharacterized protein LOC102608118 [Citrus sinensis]
JMFS129D03Sequence615013171 (8)ref|XP_008450294.1|45.4PREDICTED: uncharacterized protein LOC103491944 [Cucumis melo]
JMFS151G10Sequence614013171 (8)ref|XP_009760053.1|4e-55PREDICTED: transcription factor LHW-like [Nicotiana sylvestris]
JMFS151G11Sequence614013171 (8)ref|XP_009760053.1|4e-55PREDICTED: transcription factor LHW-like [Nicotiana sylvestris]
JMSF018B20Sequence258013171 (8)740010780 (3)ref|XP_010651650.1|2e-72PREDICTED: transcription factor LHW-like isoform X2 [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS039E02+ TCTTTCATGCGGTTTTCATCTGATAGCAAG
JMFS075E02+ TTTTGAACGGGCTCTTTCATGGCGTTTTCATCTGATAGCAAG
                      ____________________________________________________________
consensus TTTTGAACGGGCTCTTTCATGGGGTTTTCATCTGATAGCAAG
 
. : . : . : . : . : . :
JMFS039E02+ ACACCGGGAACACATCCTAGTTGACAAATCAACGTTTTCACATCATTCACAACACCCACA
JMFS075E02+ ACACCGGGAACACATCCTAGTTGACAAATCAACGTTTTCACATCATTCACAACACCCACA
                      ____________________________________________________________
consensus ACACCGGGAACACATCCTAGTTGACAAATCAACGTTTTCACATCATTCACAACACCCACA
 
. : . : . : . : . : . :
JMFS039E02+ TTCTCCGTTATCAATTTGTACGACCCAAGTTGAACAACACCGTGAGGAAGAACAGGAATA
JMFS075E02+ TTCTCCGTTATCAATTTGTACGACCCAAGTTGAACAACACCGTGAGGAAGAACAGGAATA
                      ____________________________________________________________
consensus TTCTCCGTTATCAATTTGTACGACCCAAGTTGAACAACACCGTGAGGAAGAACAGGAATA
 
. : . : . : . : . : . :
JMFS039E02+ ACTGCAACTGTCTGCATGCCAGCCGAAAATTGTTGAGACAGCTCTTTCAGAACCTCTATT
JMFS075E02+ ACTGCAACTGTCTGCATGCCAGCCGAAAATTGTTGAGACAGCTCTTTCAGAACCTCTATT
                      ____________________________________________________________
consensus ACTGCAACTGTCTGCATGCCAGCCGAAAATTGTTGAGACAGCTCTTTCAGAACCTCTATT
 
. : . : . : . : . : . :
JMFS039E02+ GGGTGCGTTTCTCGACAATACCCCTCTGACAAAATCCATTGATGGTTACCAGTAACAGCA
JMFS075E02+ GGGTGCGTTTCTCGACAATACCCCTCTGACAAAATCCATTGATGGTTACCAGTAACAGCA
JMFS151G10+ TGACAAAATCCATTGATGGTTACCAGTAACAGCA
JMFS151G11+ TGACAAAATCCATTGATGGTTACCAGTAACAGCA
                      ____________________________________________________________
consensus GGGTGCGTTTCTCGACAATACCCCTCTGACAAAATCCATTGATGGTTACCAGTAACAGCA
 
. : . : . : . : . : . :
JMFS039E02+ GCTCGTCCAACTAGTCCTTCTCCTACAACGTTGAACTGATTTTCTATCATCATCTTGTTC
JMFS075E02+ GCTCGTCCAACTAGTCCTTCTCCTACAACGTTGAACTGATTTTCTATCATCATCTTGTTC
JMFS151G10+ GCTCGTCCAACTAGTCCTTCTCCTACAACGTTGAACTGATTTTCTATCATCATCTTGTTC
JMFS151G11+ GCTCGTCCAACTAGTCCTTCTCCTACAACGTTGAACTGATTTTCTATCATCATCTTGTTC
                      ____________________________________________________________
consensus GCTCGTCCAACTAGTCCTTCTCCTACAACGTTGAACTGATTTTCTATCATCATCTTGTTC
 
. : . : . : . : . : . :
JMFS039E02+ ACAAGCAACTGCACCCTCTCCCCTGTATGCAAAAGCTGAGAATTACAAGCGCTCCAATTT
JMFS075E02+ ACAAGCAACTGCACCCTCTCCCCTGTATGCAAAAGCTGAGAATTACAAGCGCTCCAATTT
JMFS151G10+ ACAAGCAACTGCACCCTCTCCCCTGTATGCAAAAGCTGAGAATTACAAGCGCTCCAATTT
JMFS151G11+ ACAAGCAACTGCACCCTCTCCCCTGTATGCAAAAGCTGAGAATTACAAGCGCTCCAATTT
                      ____________________________________________________________
consensus ACAAGCAACTGCACCCTCTCCCCTGTATGCAAAAGCTGAGAATTACAAGCGCTCCAATTT
 
. : . : . : . : . : . :
JMFS039E02+ TGAAAAGCCAGTTCTGGGTTCTGAGACCCAGGAATCCCGTGGATACCGGAGTAGAGTACA
JMFS075E02+ TGAAAAGCCAGTTCTGGGTTCTGAGACCCAGGAATCCCGTGGATACCGGAGTAGAGTACA
JMFS151G10+ TGAAAAGCCAGTTCTGGGTTCTGAGACCCAGGAATCCCGTGGATACCGGAGTAGAGTACA
JMFS151G11+ TGAAAAGCCAGTTCTGGGTTCTGAGACCCAGGAATCCCGTGGATACCGGAGTAGAGTACA
                      ____________________________________________________________
consensus TGAAAAGCCAGTTCTGGGTTCTGAGACCCAGGAATCCCGTGGATACCGGAGTAGAGTACA
 
. : . : . : . : . : . :
JMFS039E02+ GGTTCATAATAACATTCTTCCCAAATCAAAAGCTTGGGGTTATGGCAGCCGATCTTCCAG
JMFS075E02+ GGTTCATAATAACATTCTTCCCAAATCAAAAGCTTGGGGTTATGGCAGCCGATCTTCCAG
JMFS151G10+ GGTTCATAATAACATTCTTCCCAAATCAAAAGCTTGGGGTTATGGCAGCCGATCTTCCAG
JMFS151G11+ GGTTCATAATAACATTCTTCCCAAATCAAAAGCTTGGGGTTATGGCAGCCGATCTTCCAG
JMFS022F03+ TCCAG
                      ____________________________________________________________
consensus GGTTCATAATAACATTCTTCCCAAATCAAAAGCTTGGGGTTATGGCAGCCGATCTTCCAG
 
. : . : . : . : . : . :
JMFS039E02+ AAAATAGCATAAGACCATCGATTGACTCCACACAGAGTCTTCAAAGCTTCCTTCAGCAAG
JMFS075E02+ AAAATAGCATAAGACCATCGATTGACTCCACACAGAGTCTTCAAAGCTTCCTTCAGCAAG
JMFS151G10+ AAAATAGCATAAGACCATCGATTGACTCCACACAGAGTCTTCAAAGCTTCCTTCAGCAAG
JMFS151G11+ AAAATAGCATAAGACCATCGATTGACTCCACACAGAGTCTTCAAAGCTTCCTTCAGCAAG
JMFS022F03+ AAAATAGCATAAGACCATCGATTGACTCCACACAGAGTCTTCAAAGCTTCCTTCAGCAAG
JMFS129C10+ TCCTTCAGCAAG
                      ____________________________________________________________
consensus AAAATAGCATAAGACCATCGATTGACTCCACACAGAGTCTTCAAAGCTTCCTTCAGCAAG
 
. : . : . : . : . : . :
JMFS039E02+ TACCCCATAGCGAATTACAGTCTATGAATTTATTTGAAGAACAAAACTTTC
JMFS075E02+ TACCCCATAGCGAATTACAGTCTATGAATTTATTTGAAGAACAAAACTTTCTCTTTTT
JMFS151G10+ TACCCCATAGCGAATTACAGTCTATGAATTTATTTGAAGAACAAAACTTTCTCTTTTTTT
JMFS151G11+ TACCCCATAGCGAATTACAGTCTATGAATTTATTTGAAGAACAAAACTTTCTCTTTTTTT
JMFS022F03+ TACCCCATAGCGAATTACAGTCTATGAATTTATTTGAAGAACAAAACTTTCTCTTTTTTT
JMFS129C10+ TACNCCATAGCGAATTACAGTCTATGAATTTA-TTGAAGAACAAAACTTTCTCTTTTTTT
                      ____________________________________________________________
consensus TACCCCATAGCGAATTACAGTCTATGAATTTATTTGAAGAACAAAACTTTCTCTTTTTTT
 
. : . : . : . : . : . :
JMFS151G10+ ATTGCGGAGATAAATAGAAAAGAAAAACTGAATAGTTGTCAGCGCCGGCGAAGAATCATT
JMFS151G11+ ATTGCGGAGATAAATAGAAAAGAAAAACTGAATAGTTGTCAGCGCCGGCGAAGAATCATT
JMFS022F03+ ATTGCGGAGATAAATAGAAAAGAAAAACTGAATAGTTGTCAGCGCCGGCGAAGAATCATT
JMFS129D03+ GAAGAATCATC
JMFS129C10+ ATTGCGGAGATAAATAGAAAAGAAAAACTGAATAGTTGTCAGCGCCGGCGAAGAATCATT
                      ____________________________________________________________
consensus ATTGCGGAGATAAATAGAAAAGAAAAACTGAATAGTTGTCAGCGCCGGCGAAGAATCATT
 
. : . : . : . : . : . :
JMFS151G10+ GCTCTCCTGGTTTCCGGCAAGTGCAGTTCAAATGGCCTAACTTCCTCTACAAGACCCGCG
JMFS151G11+ GCTCTCCTGGTTTCCGGCAAGTGCAGTTCAAATGGCCTAACTTCCTCTACAAGACCCGCG
JMFS022F03+ GCTCTCCTGGTTTCCGGCAAGTGCAGTTCAAATGGCCTAACTTCCTCTACAAGACCCGCG
JMFS129D03+ GCTCTCCTGGTTTCCGGCAAGTGCAGTTCCAATGGCCTACCTTCTTTTACAAGACCCGCG
JMFS129C10+ GCTCTCCTGGTTTCCGGCAAGTGCAGTTCAAATGGCCTAACTTCCTCTACAAGACCCGCG
                      ____________________________________________________________
consensus GCTCTCCTGGTTTCCGGCAAGTGCAGTTCAAATGGCCTAACTTCCTCTACAAGACCCGCG
 
. : . : . : . : . : . :
JMFS151G10+ CCCCGCCTGTTTGGTTCTCAACCCACCGCTCCTTTTCCTCTCCGGATCCAAATTCCC-TA
JMFS151G11+ CCCCGCCTGTTTGGTTCTCAACCCACCGCTCCTTTTCCTCTCCGGATCCAAATTCCC-TA
JMFS022F03+ CCCCGCCTGTTTGGTTCTCAACCCACCGCTCCTTTTCCTCTCCGGATCCAAATTCCC-TA
JMFS129D03+ CACAGGCTGTTTGGTTCTCAACCCTCCGCTCCTTTTCCTTTCCGGATCCAAATTCCCGTA
JMFS129C10+ CCCCGCCTGTTTGGTTCTCAACCCACCGCTCCTTTTCCTCTCCGGATCCAAATTCCC-TA
                      ____________________________________________________________
consensus CCCCGCCTGTTTGGTTCTCAACCCACCGCTCCTTTTCCTCTCCGGATCCAAATTCCC-TA
 
. : . : . : . : . : . :
JMFS151G10+ CAATCATGCGCTTGAAACCCATTCTAGAGAGGGAAAGAAGA
JMFS151G11+ CAATCATGCGCTTGAAACCCATTCTAGAGAGGGAAAGAAGA
JMFS022F03+ CAATCATGCGCTTGAAACCCATTCTAGAGAGGGAAAGAAGAGAGGAAGTAAGCTCCCAAA
JMFS129D03+ CAATCATGCGCTTATAACCCATTATAGACAGGGAAAGAATAGAGGAAGTAAGCTCCCTAA
JMFS129C10+ CAATCATGCGCTTGAAACCCATTCTAGAGAGGGAAAGAAGAGAGGAAGTAAGCTCCCAAA
                      ____________________________________________________________
consensus CAATCATGCGCTTGAAACCCATTCTAGAGAGGGAAAGAAGAGAGGAAGTAAGCTCCCAAA
 
. : . : . : . : . : . :
JMSF018B20+ AGCTTTAGAGCTTCTTTTTTGAAACTCCGAC
JMFS022F03+ GGAGAGAGAGAG-AGAGAGAGAAAGGAAGAGCTTTAGAGCTTCTTTTTTGAAACTCCGAC
JMFS129D03+ GCAGAGAGAGAGTAGACAGAGAAAGCCATAGCTTTAGAGCTTCCTTTGTGAAACTCCGCA
JMFS129C10+ GGAGAGAGAGAG-AGAGAGAGAAAGGAAGAGCTTTAGAGCTTCTTTTTTGAAACTCCGAC
                      ____________________________________________________________
consensus GGAGAGAGAGAG-AGAGAGAGAAAGGAAGAGCTTTAGAGCTTCTTTTTTGAAACTCCGAC
 
. : . : . : . : . : . :
JMSF018B20+ GACCCTTTCCGGGAAACCTACACTATGCCACAAGCCTTGAGCTCACAGCTAACAATAAGC
JMFS022F03+ GACCCTTTCCGGGAAACCTACACTATGCCACAAGCCTTGAGCTCACAGCTAACAATAAGC
JMFS129D03+ GTCCCCTTCCGGGGACCCTACAGTATGCCACAAGCCTTGAGCTCCCAGTTACCAATAAGC
JMFS129C10+ GACCCTTTCCGGGAAACCTACACTATGCCACAAGCCTTGAGCTCACAGCTAACAATAAGC
                      ____________________________________________________________
consensus GACCCTTTCCGGGAAACCTACACTATGCCACAAGCCTTGAGCTCACAGCTAACAATAAGC
 
. : . : . : . : . : . :
JMSF018B20+ ACAATTTTCTCCATTTCAAGAAGCAAAGAAAAGTGGGTATATACCAGTGTATCTGTATCA
JMFS022F03+ ACAATTTTCTCCATTTCAAGAAGCAAAGAAAAGTGGGTATATACCAGTGTATCTGTATCA
JMFS129D03+ TCAATTTTCTCCATTTCAAGAAGCAAAGAAAAGTGGGTATATTCCAGTGTATCTGTATCA
JMFS129C10+ ACAATTTTCTCCATTTCAAGAAGCAAAGAAAAGTGGGTATATACCAGTGTATCTGTATCA
                      ____________________________________________________________
consensus ACAATTTTCTCCATTTCAAGAAGCAAAGAAAAGTGGGTATATACCAGTGTATCTGTATCA
 
. : . : . : . : . : . :
JMSF018B20+ AGATTCAAAGAATTGGAGAAAAAGACGAGAGCTTTAGAATGGGAGCAAAGAATCTCAGGG
JMFS022F03+ AGATTCAAAGAATTGGAGAAAAAGACGAGAGCTTTAGAATGGGAGCAAAGAATCTCAGGG
JMFS129D03+ AGATTCAAAGAATTGGAGAAAAATGCGAGAGCGTTAGAATGGGAGCAAAGAATCTCAGGG
JMFS129C10+ AGATTCAAAGAATTGGAGAAAAAGACGAGAGCTTTAGAATGGGAGCAAAGAATCTCAGGG
                      ____________________________________________________________
consensus AGATTCAAAGAATTGGAGAAAAAGACGAGAGCTTTAGAATGGGAGCAAAGAATCTCAGGG
 
. : . : . : . : . : . :
JMSF018B20+ TATAT
JMFS022F03+ TATAT
JMFS129D03+ TATATAGTCAAGTGTGATGGTTTTTTGCTGAG
JMFS129C10+ TATAT-CTCAAGTGTGATGGTTTTTTGCTGAGAACTTAACGGAGATAGGATTCACTTTTT
                      ____________________________________________________________
consensus TATATAGTCAAGTGTGATGGTTTTTTGCTGAGAACTTAACGGAGATAGGATTCACTTTTT