| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS022F03 | Sequence | 627 | 013171 (8) | ref|XP_006494897.1| | 64.3 | PREDICTED: uncharacterized protein LOC102608118 [Citrus sinensis] | |||||
| JMFS039E02 | Sequence | 621 | 013171 (8) | ref|XP_009760053.1| | 1e-95 | PREDICTED: transcription factor LHW-like [Nicotiana sylvestris] | |||||
| JMFS075E02 | Sequence | 640 | 013171 (8) | ref|XP_009760053.1| | 1e-97 | PREDICTED: transcription factor LHW-like [Nicotiana sylvestris] | |||||
| JMFS129C10 | Sequence | 615 | 013171 (8) | ref|XP_006494897.1| | 64.3 | PREDICTED: uncharacterized protein LOC102608118 [Citrus sinensis] | |||||
| JMFS129D03 | Sequence | 615 | 013171 (8) | ref|XP_008450294.1| | 45.4 | PREDICTED: uncharacterized protein LOC103491944 [Cucumis melo] | |||||
| JMFS151G10 | Sequence | 614 | 013171 (8) | ref|XP_009760053.1| | 4e-55 | PREDICTED: transcription factor LHW-like [Nicotiana sylvestris] | |||||
| JMFS151G11 | Sequence | 614 | 013171 (8) | ref|XP_009760053.1| | 4e-55 | PREDICTED: transcription factor LHW-like [Nicotiana sylvestris] | |||||
| JMSF018B20 | Sequence | 258 | 013171 (8) | 740 | 010780 (3) | ref|XP_010651650.1| | 2e-72 | PREDICTED: transcription factor LHW-like isoform X2 [Vitis vinifera] | |||
This contig is upended
. : . : . : . : . : . :
JMFS039E02+ TCTTTCATGCGGTTTTCATCTGATAGCAAG
JMFS075E02+ TTTTGAACGGGCTCTTTCATGGCGTTTTCATCTGATAGCAAG
____________________________________________________________
consensus TTTTGAACGGGCTCTTTCATGGGGTTTTCATCTGATAGCAAG
. : . : . : . : . : . :
JMFS039E02+ ACACCGGGAACACATCCTAGTTGACAAATCAACGTTTTCACATCATTCACAACACCCACA
JMFS075E02+ ACACCGGGAACACATCCTAGTTGACAAATCAACGTTTTCACATCATTCACAACACCCACA
____________________________________________________________
consensus ACACCGGGAACACATCCTAGTTGACAAATCAACGTTTTCACATCATTCACAACACCCACA
. : . : . : . : . : . :
JMFS039E02+ TTCTCCGTTATCAATTTGTACGACCCAAGTTGAACAACACCGTGAGGAAGAACAGGAATA
JMFS075E02+ TTCTCCGTTATCAATTTGTACGACCCAAGTTGAACAACACCGTGAGGAAGAACAGGAATA
____________________________________________________________
consensus TTCTCCGTTATCAATTTGTACGACCCAAGTTGAACAACACCGTGAGGAAGAACAGGAATA
. : . : . : . : . : . :
JMFS039E02+ ACTGCAACTGTCTGCATGCCAGCCGAAAATTGTTGAGACAGCTCTTTCAGAACCTCTATT
JMFS075E02+ ACTGCAACTGTCTGCATGCCAGCCGAAAATTGTTGAGACAGCTCTTTCAGAACCTCTATT
____________________________________________________________
consensus ACTGCAACTGTCTGCATGCCAGCCGAAAATTGTTGAGACAGCTCTTTCAGAACCTCTATT
. : . : . : . : . : . :
JMFS039E02+ GGGTGCGTTTCTCGACAATACCCCTCTGACAAAATCCATTGATGGTTACCAGTAACAGCA
JMFS075E02+ GGGTGCGTTTCTCGACAATACCCCTCTGACAAAATCCATTGATGGTTACCAGTAACAGCA
JMFS151G10+ TGACAAAATCCATTGATGGTTACCAGTAACAGCA
JMFS151G11+ TGACAAAATCCATTGATGGTTACCAGTAACAGCA
____________________________________________________________
consensus GGGTGCGTTTCTCGACAATACCCCTCTGACAAAATCCATTGATGGTTACCAGTAACAGCA
. : . : . : . : . : . :
JMFS039E02+ GCTCGTCCAACTAGTCCTTCTCCTACAACGTTGAACTGATTTTCTATCATCATCTTGTTC
JMFS075E02+ GCTCGTCCAACTAGTCCTTCTCCTACAACGTTGAACTGATTTTCTATCATCATCTTGTTC
JMFS151G10+ GCTCGTCCAACTAGTCCTTCTCCTACAACGTTGAACTGATTTTCTATCATCATCTTGTTC
JMFS151G11+ GCTCGTCCAACTAGTCCTTCTCCTACAACGTTGAACTGATTTTCTATCATCATCTTGTTC
____________________________________________________________
consensus GCTCGTCCAACTAGTCCTTCTCCTACAACGTTGAACTGATTTTCTATCATCATCTTGTTC
. : . : . : . : . : . :
JMFS039E02+ ACAAGCAACTGCACCCTCTCCCCTGTATGCAAAAGCTGAGAATTACAAGCGCTCCAATTT
JMFS075E02+ ACAAGCAACTGCACCCTCTCCCCTGTATGCAAAAGCTGAGAATTACAAGCGCTCCAATTT
JMFS151G10+ ACAAGCAACTGCACCCTCTCCCCTGTATGCAAAAGCTGAGAATTACAAGCGCTCCAATTT
JMFS151G11+ ACAAGCAACTGCACCCTCTCCCCTGTATGCAAAAGCTGAGAATTACAAGCGCTCCAATTT
____________________________________________________________
consensus ACAAGCAACTGCACCCTCTCCCCTGTATGCAAAAGCTGAGAATTACAAGCGCTCCAATTT
. : . : . : . : . : . :
JMFS039E02+ TGAAAAGCCAGTTCTGGGTTCTGAGACCCAGGAATCCCGTGGATACCGGAGTAGAGTACA
JMFS075E02+ TGAAAAGCCAGTTCTGGGTTCTGAGACCCAGGAATCCCGTGGATACCGGAGTAGAGTACA
JMFS151G10+ TGAAAAGCCAGTTCTGGGTTCTGAGACCCAGGAATCCCGTGGATACCGGAGTAGAGTACA
JMFS151G11+ TGAAAAGCCAGTTCTGGGTTCTGAGACCCAGGAATCCCGTGGATACCGGAGTAGAGTACA
____________________________________________________________
consensus TGAAAAGCCAGTTCTGGGTTCTGAGACCCAGGAATCCCGTGGATACCGGAGTAGAGTACA
. : . : . : . : . : . :
JMFS039E02+ GGTTCATAATAACATTCTTCCCAAATCAAAAGCTTGGGGTTATGGCAGCCGATCTTCCAG
JMFS075E02+ GGTTCATAATAACATTCTTCCCAAATCAAAAGCTTGGGGTTATGGCAGCCGATCTTCCAG
JMFS151G10+ GGTTCATAATAACATTCTTCCCAAATCAAAAGCTTGGGGTTATGGCAGCCGATCTTCCAG
JMFS151G11+ GGTTCATAATAACATTCTTCCCAAATCAAAAGCTTGGGGTTATGGCAGCCGATCTTCCAG
JMFS022F03+ TCCAG
____________________________________________________________
consensus GGTTCATAATAACATTCTTCCCAAATCAAAAGCTTGGGGTTATGGCAGCCGATCTTCCAG
. : . : . : . : . : . :
JMFS039E02+ AAAATAGCATAAGACCATCGATTGACTCCACACAGAGTCTTCAAAGCTTCCTTCAGCAAG
JMFS075E02+ AAAATAGCATAAGACCATCGATTGACTCCACACAGAGTCTTCAAAGCTTCCTTCAGCAAG
JMFS151G10+ AAAATAGCATAAGACCATCGATTGACTCCACACAGAGTCTTCAAAGCTTCCTTCAGCAAG
JMFS151G11+ AAAATAGCATAAGACCATCGATTGACTCCACACAGAGTCTTCAAAGCTTCCTTCAGCAAG
JMFS022F03+ AAAATAGCATAAGACCATCGATTGACTCCACACAGAGTCTTCAAAGCTTCCTTCAGCAAG
JMFS129C10+ TCCTTCAGCAAG
____________________________________________________________
consensus AAAATAGCATAAGACCATCGATTGACTCCACACAGAGTCTTCAAAGCTTCCTTCAGCAAG
. : . : . : . : . : . :
JMFS039E02+ TACCCCATAGCGAATTACAGTCTATGAATTTATTTGAAGAACAAAACTTTC
JMFS075E02+ TACCCCATAGCGAATTACAGTCTATGAATTTATTTGAAGAACAAAACTTTCTCTTTTT
JMFS151G10+ TACCCCATAGCGAATTACAGTCTATGAATTTATTTGAAGAACAAAACTTTCTCTTTTTTT
JMFS151G11+ TACCCCATAGCGAATTACAGTCTATGAATTTATTTGAAGAACAAAACTTTCTCTTTTTTT
JMFS022F03+ TACCCCATAGCGAATTACAGTCTATGAATTTATTTGAAGAACAAAACTTTCTCTTTTTTT
JMFS129C10+ TACNCCATAGCGAATTACAGTCTATGAATTTA-TTGAAGAACAAAACTTTCTCTTTTTTT
____________________________________________________________
consensus TACCCCATAGCGAATTACAGTCTATGAATTTATTTGAAGAACAAAACTTTCTCTTTTTTT
. : . : . : . : . : . :
JMFS151G10+ ATTGCGGAGATAAATAGAAAAGAAAAACTGAATAGTTGTCAGCGCCGGCGAAGAATCATT
JMFS151G11+ ATTGCGGAGATAAATAGAAAAGAAAAACTGAATAGTTGTCAGCGCCGGCGAAGAATCATT
JMFS022F03+ ATTGCGGAGATAAATAGAAAAGAAAAACTGAATAGTTGTCAGCGCCGGCGAAGAATCATT
JMFS129D03+ GAAGAATCATC
JMFS129C10+ ATTGCGGAGATAAATAGAAAAGAAAAACTGAATAGTTGTCAGCGCCGGCGAAGAATCATT
____________________________________________________________
consensus ATTGCGGAGATAAATAGAAAAGAAAAACTGAATAGTTGTCAGCGCCGGCGAAGAATCATT
. : . : . : . : . : . :
JMFS151G10+ GCTCTCCTGGTTTCCGGCAAGTGCAGTTCAAATGGCCTAACTTCCTCTACAAGACCCGCG
JMFS151G11+ GCTCTCCTGGTTTCCGGCAAGTGCAGTTCAAATGGCCTAACTTCCTCTACAAGACCCGCG
JMFS022F03+ GCTCTCCTGGTTTCCGGCAAGTGCAGTTCAAATGGCCTAACTTCCTCTACAAGACCCGCG
JMFS129D03+ GCTCTCCTGGTTTCCGGCAAGTGCAGTTCCAATGGCCTACCTTCTTTTACAAGACCCGCG
JMFS129C10+ GCTCTCCTGGTTTCCGGCAAGTGCAGTTCAAATGGCCTAACTTCCTCTACAAGACCCGCG
____________________________________________________________
consensus GCTCTCCTGGTTTCCGGCAAGTGCAGTTCAAATGGCCTAACTTCCTCTACAAGACCCGCG
. : . : . : . : . : . :
JMFS151G10+ CCCCGCCTGTTTGGTTCTCAACCCACCGCTCCTTTTCCTCTCCGGATCCAAATTCCC-TA
JMFS151G11+ CCCCGCCTGTTTGGTTCTCAACCCACCGCTCCTTTTCCTCTCCGGATCCAAATTCCC-TA
JMFS022F03+ CCCCGCCTGTTTGGTTCTCAACCCACCGCTCCTTTTCCTCTCCGGATCCAAATTCCC-TA
JMFS129D03+ CACAGGCTGTTTGGTTCTCAACCCTCCGCTCCTTTTCCTTTCCGGATCCAAATTCCCGTA
JMFS129C10+ CCCCGCCTGTTTGGTTCTCAACCCACCGCTCCTTTTCCTCTCCGGATCCAAATTCCC-TA
____________________________________________________________
consensus CCCCGCCTGTTTGGTTCTCAACCCACCGCTCCTTTTCCTCTCCGGATCCAAATTCCC-TA
. : . : . : . : . : . :
JMFS151G10+ CAATCATGCGCTTGAAACCCATTCTAGAGAGGGAAAGAAGA
JMFS151G11+ CAATCATGCGCTTGAAACCCATTCTAGAGAGGGAAAGAAGA
JMFS022F03+ CAATCATGCGCTTGAAACCCATTCTAGAGAGGGAAAGAAGAGAGGAAGTAAGCTCCCAAA
JMFS129D03+ CAATCATGCGCTTATAACCCATTATAGACAGGGAAAGAATAGAGGAAGTAAGCTCCCTAA
JMFS129C10+ CAATCATGCGCTTGAAACCCATTCTAGAGAGGGAAAGAAGAGAGGAAGTAAGCTCCCAAA
____________________________________________________________
consensus CAATCATGCGCTTGAAACCCATTCTAGAGAGGGAAAGAAGAGAGGAAGTAAGCTCCCAAA
. : . : . : . : . : . :
JMSF018B20+ AGCTTTAGAGCTTCTTTTTTGAAACTCCGAC
JMFS022F03+ GGAGAGAGAGAG-AGAGAGAGAAAGGAAGAGCTTTAGAGCTTCTTTTTTGAAACTCCGAC
JMFS129D03+ GCAGAGAGAGAGTAGACAGAGAAAGCCATAGCTTTAGAGCTTCCTTTGTGAAACTCCGCA
JMFS129C10+ GGAGAGAGAGAG-AGAGAGAGAAAGGAAGAGCTTTAGAGCTTCTTTTTTGAAACTCCGAC
____________________________________________________________
consensus GGAGAGAGAGAG-AGAGAGAGAAAGGAAGAGCTTTAGAGCTTCTTTTTTGAAACTCCGAC
. : . : . : . : . : . :
JMSF018B20+ GACCCTTTCCGGGAAACCTACACTATGCCACAAGCCTTGAGCTCACAGCTAACAATAAGC
JMFS022F03+ GACCCTTTCCGGGAAACCTACACTATGCCACAAGCCTTGAGCTCACAGCTAACAATAAGC
JMFS129D03+ GTCCCCTTCCGGGGACCCTACAGTATGCCACAAGCCTTGAGCTCCCAGTTACCAATAAGC
JMFS129C10+ GACCCTTTCCGGGAAACCTACACTATGCCACAAGCCTTGAGCTCACAGCTAACAATAAGC
____________________________________________________________
consensus GACCCTTTCCGGGAAACCTACACTATGCCACAAGCCTTGAGCTCACAGCTAACAATAAGC
. : . : . : . : . : . :
JMSF018B20+ ACAATTTTCTCCATTTCAAGAAGCAAAGAAAAGTGGGTATATACCAGTGTATCTGTATCA
JMFS022F03+ ACAATTTTCTCCATTTCAAGAAGCAAAGAAAAGTGGGTATATACCAGTGTATCTGTATCA
JMFS129D03+ TCAATTTTCTCCATTTCAAGAAGCAAAGAAAAGTGGGTATATTCCAGTGTATCTGTATCA
JMFS129C10+ ACAATTTTCTCCATTTCAAGAAGCAAAGAAAAGTGGGTATATACCAGTGTATCTGTATCA
____________________________________________________________
consensus ACAATTTTCTCCATTTCAAGAAGCAAAGAAAAGTGGGTATATACCAGTGTATCTGTATCA
. : . : . : . : . : . :
JMSF018B20+ AGATTCAAAGAATTGGAGAAAAAGACGAGAGCTTTAGAATGGGAGCAAAGAATCTCAGGG
JMFS022F03+ AGATTCAAAGAATTGGAGAAAAAGACGAGAGCTTTAGAATGGGAGCAAAGAATCTCAGGG
JMFS129D03+ AGATTCAAAGAATTGGAGAAAAATGCGAGAGCGTTAGAATGGGAGCAAAGAATCTCAGGG
JMFS129C10+ AGATTCAAAGAATTGGAGAAAAAGACGAGAGCTTTAGAATGGGAGCAAAGAATCTCAGGG
____________________________________________________________
consensus AGATTCAAAGAATTGGAGAAAAAGACGAGAGCTTTAGAATGGGAGCAAAGAATCTCAGGG
. : . : . : . : . : . :
JMSF018B20+ TATAT
JMFS022F03+ TATAT
JMFS129D03+ TATATAGTCAAGTGTGATGGTTTTTTGCTGAG
JMFS129C10+ TATAT-CTCAAGTGTGATGGTTTTTTGCTGAGAACTTAACGGAGATAGGATTCACTTTTT
____________________________________________________________
consensus TATATAGTCAAGTGTGATGGTTTTTTGCTGAGAACTTAACGGAGATAGGATTCACTTTTT