Contig 013169:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS122H11Sequence502013169 (2)ref|XP_010248573.1|1e-15PREDICTED: alpha-glucan water dikinase, chloroplastic isoform X2 [Nelumbo nucif
JMFS127F08Sequence616013169 (2)gb|KHG20916.1|3e-74Alpha-glucan water dikinase, chloroplastic [Gossypium arboreum]

Alignment

This contig is upended


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JMFS122H11-                                 ACCCTAAACTATAGGAGTCTTACATCTGCAATAGAAGT
                      ____________________________________________________________
consensus                                   ACCCTAAACTATAGGAGTCTTACATCTGCAATAGAAGT
 
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JMFS122H11-           CACCAAGCTTGGGGGGCGCTGCTATAATTCTTATTATCTTTTCTCTGCTTTTTGCCTGGG
                      ____________________________________________________________
consensus             CACCAAGCTTGGGGGGCGCTGCTATAATTCTTATTATCTTTTCTCTGCTTTTTGCCTGGG
 
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JMFS122H11-           AAAAAGCTTTTGCATGCATAACACTGCCCAGTGTACAAAGACCCGGTTGGATATATAGGA
JMFS127F08+                                                       GGTTGTATATATAGGA
                      ____________________________________________________________
consensus             AAAAAGCTTTTGCATGCATAACACTGCCCAGTGTACAAAGACCCGGTTGTATATATAGGA
 
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JMFS122H11-           TACCCTATTTTTATTGGGAATACTATGTTGATACGAAAATCAATAACAAAACCTTTTAAT
JMFS127F08+           TACAATATTTTTATTGGTAATACTATGTTGATACGAAAATCAATAACAAAACCTTTTAAT
                      ____________________________________________________________
consensus             TACCCTATTTTTATTGGTAATACTATGTTGATACGAAAATCAATAACAAAACCTTTTAAT
 
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JMFS122H11-           ACAGAAATAATTTATTGCATGAGGTTATAGCTGCTGAGTTTTGCATTCTATCTGCGCATT
JMFS127F08+           ACAGAAATAATTTATTGCATGAGGTTATAGCTGTTGAGTTTTGCATTCTATCTGTGCATT
                      ____________________________________________________________
consensus             ACAGAAATAATTTATTGCATGAGGTTATAGCTGTTGAGTTTTGCATTCTATCTGTGCATT
 
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JMFS122H11-           TCTTTCATCCCGCAATTCTCTTCCAAATCTTGAATTTAGAACTGACATCAGGCCAAGTTC
JMFS127F08+           TCTTTCATCCTGCAATTCTCTTCCAAATCTTGAATTTAGAACTGAGATCAGGCCAAGTTC
                      ____________________________________________________________
consensus             TCTTTCATCCTGCAATTCTCTTCCAAATCTTGAATTTAGAACTGAGATCAGGCCAAGTTC
 
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JMFS122H11-           AAAGATAGCTCGGATTTCCACATAGTCAATCACATCTGTGGGCGAGTCTGGACAACAAAA
JMFS127F08+           AAAGATAGCTCGGATTTCCACATAGTCAATCACATCTGTGGTCGTGTCTGGACAACAAAA
                      ____________________________________________________________
consensus             AAAGATAGCTCGGATTTCCACATAGTCAATCACATCTGTGGTCGTGTCTGGACAACAAAA
 
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JMFS122H11-           ATCTTCCCATCCCTCACTACACCTTCGATGGCTTGAGGGGACCCGTATAACTCCTCAATC
JMFS127F08+           ATCTTCCCATCCCTCACTACACCTTCGATGTCTTGAGGTGATCCGTATAGCTCCTCAATC
                      ____________________________________________________________
consensus             ATCTTCCCATCCCTCACTACACCTTCGATGTCTTGAGGTGATCCGTATAGCTCCTCAATC
 
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JMFS122H11-           ACGCTTCCAACACGGGCAATGTTACAGAGGATTGAATGACGGAA                
JMFS127F08+           ACGCTTCCAGCACGGGCAATGTTAGAGAGGATTGAATGACGGAAATCATTACTGGTTATT
                      ____________________________________________________________
consensus             ACGCTTCCAGCACGGGCAATGTTAGAGAGGATTGAATGACGGAAATCATTACTGGTTATT
 
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JMFS127F08+           AATGGATCAGCTGAGTAATCCAACACAACTTTCTCCTCTTCATCCATTGGCACACTATCA
                      ____________________________________________________________
consensus             AATGGATCAGCTGAGTAATCCAACACAACTTTCTCCTCTTCATCCATTGGCACACTATCA
 
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JMFS127F08+           TAAAGACCAGCACCAGCATAACCTTCTAGATCTTCACCATTGGAGTCAGAGCGGAAGATT
                      ____________________________________________________________
consensus             TAAAGACCAGCACCAGCATAACCTTCTAGATCTTCACCATTGGAGTCAGAGCGGAAGATT
 
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JMFS127F08+           ATAGATCGCCTTATGAAAAGGCCTATGGGCTTGCTTGGGTAACCAAGCACCTGAGGAGAG
                      ____________________________________________________________
consensus             ATAGATCGCCTTATGAAAAGGCCTATGGGCTTGCTTGGGTAACCAAGCACCTGAGGAGAG
 
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JMFS127F08+           TCTAGATTATTCTTTTTGCAGACGAAACTCAGAGCACGACCTGGATAAGCGCCAACTAGT
                      ____________________________________________________________
consensus             TCTAGATTATTCTTTTTGCAGACGAAACTCAGAGCACGACCTGGATAAGCGCCAACTAGT