Contig 013165:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS078C08Sequence642013165 (3)
JMFS123D11Sequence572013165 (3)
JMSF027O12Sequence666013165 (3)

Alignment

This contig is upended


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JMFS078C08+                                                               TACCTTCA
                      ____________________________________________________________
consensus                                                                 TACCTTCA
 
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JMFS078C08+           GCATCCTCTTCATTGTTTTTTGTACTTTGTTCATGTTCTGGTTCCCCAATTATACATGCT
                      ____________________________________________________________
consensus             GCATCCTCTTCATTGTTTTTTGTACTTTGTTCATGTTCTGGTTCCCCAATTATACATGCT
 
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JMFS078C08+           AACTTGCCTTCTTCCTTTAGAATATCTTCTCCATCACCTGTTGCCATTTCAGCTATGTAC
                      ____________________________________________________________
consensus             AACTTGCCTTCTTCCTTTAGAATATCTTCTCCATCACCTGTTGCCATTTCAGCTATGTAC
 
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JMFS078C08+           TCACCATTAGTTACTTCCTTCAAAGCATTTCCTCTGTCATCTATTTCATAGTAACCTACA
                      ____________________________________________________________
consensus             TCACCATTAGTTACTTCCTTCAAAGCATTTCCTCTGTCATCTATTTCATAGTAACCTACA
 
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JMFS078C08+           TACTCTCCATCCCCTTCATTTGCTATTGTGTTTTCATTTATCCTATGAGCAGCTGTGTAC
                      ____________________________________________________________
consensus             TACTCTCCATCCCCTTCATTTGCTATTGTGTTTTCATTTATCCTATGAGCAGCTGTGTAC
 
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JMFS078C08+           TCTACATCCTTTAAAACATCTTCTCCATCATGTGTTCCAATATCAGCTACATCCTCTTCA
                      ____________________________________________________________
consensus             TCTACATCCTTTAAAACATCTTCTCCATCATGTGTTCCAATATCAGCTACATCCTCTTCA
 
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JMFS078C08+           TCATATTCCTCTGTTATTTCATTTTCATCATTCCCGGAAACTACATCAAAAGAGACTGTA
                      ____________________________________________________________
consensus             TCATATTCCTCTGTTATTTCATTTTCATCATTCCCGGAAACTACATCAAAAGAGACTGTA
 
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JMFS078C08+           CGGTATTCTTCTACAAAATCTTCATCCTCTACACCCATTTCCGTCTCAAGGGAGTCATTT
                      ____________________________________________________________
consensus             CGGTATTCTTCTACAAAATCTTCATCCTCTACACCCATTTCCGTCTCAAGGGAGTCATTT
 
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JMFS078C08+           GTCACCCGAGGACTGAGAGGACAAGATTCCTCAGCACCACCATCAGCACTAGGAAACGGA
JMSF027O12+                     GACTGAGAGGACAAGATTCCTCAGCACCACCATCAGCACTAGGAAACGGA
                      ____________________________________________________________
consensus             GTCACCCGAGGACTGAGAGGACAAGATTCCTCAGCACCACCATCAGCACTAGGAAACGGA
 
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JMFS078C08+           GCAGTTTTCCATCTTCGGTATGCCATCAGAAAATCGCTATAGTTTCTGAATAAAGGGCAT
JMSF027O12+           GCAGTTTTCCATCTTCGGTATGCCATCAGAAAATCGCTATAGTTTCTGAATAAAGGGCAT
                      ____________________________________________________________
consensus             GCAGTTTTCCATCTTCGGTATGCCATCAGAAAATCGCTATAGTTTCTGAATAAAGGGCAT
 
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JMFS078C08+           TAATCATAAACTACAAACAGGTTCATCCGCTGACACAT                      
JMSF027O12+           TAATCATAAACTACAAACAGGTTCATCCGCTGACACATCTTGATACAGAAATATTTAACA
                      ____________________________________________________________
consensus             TAATCATAAACTACAAACAGGTTCATCCGCTGACACATCTTGATACAGAAATATTTAACA
 
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JMSF027O12+           AGAGGACTGTTGTTAGAAATCCAAGTCTATGATGGAGAATACTGTGCTAAACAAGCAAGC
JMFS123D11+                                       ATGATGGAGAATACTGTGCTAAACAAGCAAGC
                      ____________________________________________________________
consensus             AGAGGACTGTTGTTAGAAATCCAAGTCTATGATGGAGAATACTGTGCTAAACAAGCAAGC
 
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JMSF027O12+           AGTACTGGTGAGAACCAGGAATATTGAGGGGAGAAAAATGAAAACAGAGGACAATCCAGT
JMFS123D11+           AGTACTGGTGAGAACCAGGAATATTGAGGGGAGAAAAATGAAAACAGAGGACAATCCAGT
                      ____________________________________________________________
consensus             AGTACTGGTGAGAACCAGGAATATTGAGGGGAGAAAAATGAAAACAGAGGACAATCCAGT
 
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JMSF027O12+           AAGTTGAAAGGCAGATTTGGGTAGCAACAAGGATAAAATTCTAGACCAAATCCAACGTCA
JMFS123D11+           AAGTTGAAAGGCAGATTTGGGTAGCAACAAGGATAAAATTCTAGACCAAATCCAACGTCA
                      ____________________________________________________________
consensus             AAGTTGAAAGGCAGATTTGGGTAGCAACAAGGATAAAATTCTAGACCAAATCCAACGTCA
 
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JMSF027O12+           TCCTGATCAAAACACAACACATTCTAGGATTCTACCAATCGACATTGAAATTTCAGGCCC
JMFS123D11+           TCCTGATCAAAACACAACACATTCTAGGATTCTACCAATCGACATTGAAATTTCAGGCCC
                      ____________________________________________________________
consensus             TCCTGATCAAAACACAACACATTCTAGGATTCTACCAATCGACATTGAAATTTCAGGCCC
 
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JMSF027O12+           AAACCATACATCCACCAGGTGAGATACGCGAAAATTTCCAATTTCAACACAAAGGCAGGA
JMFS123D11+           AAACCATACATCCACCAGGTGAGATACGCGAAAATTTCCAATTTCAACACAAAGGCAGGA
                      ____________________________________________________________
consensus             AAACCATACATCCACCAGGTGAGATACGCGAAAATTTCCAATTTCAACACAAAGGCAGGA
 
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JMSF027O12+           AATTAGGTGAAACGCAAAATGTTAACAAACAGAAATCGATACAATTACGAAATCAATGAC
JMFS123D11+           AATTAGGTGAAACGCAAAATGTTAACAAACAGAAATCGATACAATTACGAAATCAATGAC
                      ____________________________________________________________
consensus             AATTAGGTGAAACGCAAAATGTTAACAAACAGAAATCGATACAATTACGAAATCAATGAC
 
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JMSF027O12+           GGTATGACGCACGCTTCATTGAAAGAACTATT                            
JMFS123D11+           GGTATGACGCACGCTTCATTGAAAGAACTATTCTGCACAAGTAGTCAAAAGAATTATTCT
                      ____________________________________________________________
consensus             GGTATGACGCACGCTTCATTGAAAGAACTATTCTGCACAAGTAGTCAAAAGAATTATTCT
 
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JMFS123D11+           AATTTAATCATCGTCGAAACCCTAAAATCATTACAGAAGTGCGAGAAAAAAAAAAAAAAA
                      ____________________________________________________________
consensus             AATTTAATCATCGTCGAAACCCTAAAATCATTACAGAAGTGCGAGAAAAAAAAAAAAAAA
 
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JMFS123D11+           AGGGCTGTAAAACAATAAATTTCTATAATCAATCAATTTCTAGATGACAAATGAAATGGA
                      ____________________________________________________________
consensus             AGGGCTGTAAAACAATAAATTTCTATAATCAATCAATTTCTAGATGACAAATGAAATGGA
 
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JMFS123D11+           TAGATCGAAGGAAAAGATTCAAAACCAAACTTACTTGAGCTATGGAAGATGTCGATCGAA
                      ____________________________________________________________
consensus             TAGATCGAAGGAAAAGATTCAAAACCAAACTTACTTGAGCTATGGAAGATGTCGATCGAA