| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF031H14 | Sequence | 634 | 013161 (4) | emb|CDP18450.1| | 6e-101 | unnamed protein product [Coffea canephora] | 633 | 002639 (2) | ref|XP_009621448.1| | 4e-97 | PREDICTED: beta-galactosidase 10 [Nicotiana tomentosiformis] |
| JMFF036G06 | Sequence | 610 | 013161 (4) | emb|CDP18450.1| | 2e-96 | unnamed protein product [Coffea canephora] | 745 | 002639 (2) | ref|XP_006351534.1| | 3e-105 | PREDICTED: beta-galactosidase 3-like [Solanum tuberosum] |
| JMFS084E06 | Sequence | 623 | 013161 (4) | emb|CDP18450.1| | 6e-91 | unnamed protein product [Coffea canephora] | |||||
| JMFS120C09 | Sequence | 627 | 013161 (4) | emb|CDP18450.1| | 3e-90 | unnamed protein product [Coffea canephora] | |||||
This contig is upended
. : . : . : . : . : . :
JMFF031H14+ TGCCAAGATGA
____________________________________________________________
consensus TGCCAAGATGA
. : . : . : . : . : . :
JMFF036G06+ CTGAGATGCAAAAAGTCTCTCTTGTTTCATCAGATTTACTATGAAGGTCA
JMFF031H14+ TAGGNCCTCCCTGAGATGCAAAAAGTCTCTCTTGTTTCATCAGATTTACTATGAAGGTCA
JMFS084E06+ GTTTCATCAGATTTACTATGAAGGTCA
JMFS120C09+ GTTTCATCAGATTTACTATGAAGGTCA
____________________________________________________________
consensus TAGGNCCTCCCTGAGATGCAAAAAGTCTCTCTTGTTTCATCAGATTTACTATGAAGGTCA
. : . : . : . : . : . :
JMFF036G06+ TAAAATTCTGCATGTAATACTTAAATGGTTCATTGTCCGTCCGAAAAATGGTACCTGGCA
JMFF031H14+ TAAAATTCTGCATGTAATACTTAAATGGTTCATTGTCCGTCCGAAAAATGGTACCTGGCA
JMFS084E06+ TAAAATTCTGCATGTAATACTTAAATGGTTCATTGTCCGTCCGAAAAATGGTACCTGGCA
JMFS120C09+ TAAAATTCTGCATGTAATACTTAAATGGTTCATTGTCCGTCCGAAAAATGGTACCTGGCA
____________________________________________________________
consensus TAAAATTCTGCATGTAATACTTAAATGGTTCATTGTCCGTCCGAAAAATGGTACCTGGCA
. : . : . : . : . : . :
JMFF036G06+ CATAATGAAGCCAGACAGGTATTCCACCAAAGTTCCACTCTGCAGCAATGAATGGTCCAA
JMFF031H14+ CATAATGAAGCCAGACAGGTATTCCACCAAAGTTCCACTCTGCAGCAATGAATGGTCCAA
JMFS084E06+ CATAATGAAGCCAGACAGGTATTCCACCAAAGTTCCACTCTGCAGCAATGAATGGTCCAA
JMFS120C09+ CATAATGAAGCCAGACAGGTATTCCACCAAAGTTCCACTCTGCAGCAATGAATGGTCCAA
____________________________________________________________
consensus CATAATGAAGCCAGACAGGTATTCCACCAAAGTTCCACTCTGCAGCAATGAATGGTCCAA
. : . : . : . : . : . :
JMFF036G06+ TTCGAAGAATCATATACATACCAGCCTGCTGAACAATCTTGCAAAACTTGACAAGGTCAT
JMFF031H14+ TTCGAAGAATCATATACATACCAGCCTGCTGAACAATCTTGCAAAACTTGACAAGGTCAT
JMFS084E06+ TTCGAAGAATCATATACATACCAGCCTGCTGAACAATCTTGCAAAACTTGACAAGGTCAT
JMFS120C09+ TTCGAAGAATCATATACATACCAGCCTGCTGAACAATCTTGCAAAACTTGACAAGGTCAT
____________________________________________________________
consensus TTCGAAGAATCATATACATACCAGCCTGCTGAACAATCTTGCAAAACTTGACAAGGTCAT
. : . : . : . : . : . :
JMFF036G06+ ACCTTCCACCAAAGTAATATTTGCCTGGAAAAGGCTCATGACCATTCCAGAAGACGTAAG
JMFF031H14+ ACCTTCCACCAAAGTAATATTTGCCTGGAAAAGGCTCATGACCATTCCAGAAGACGTAAG
JMFS084E06+ ACCTTCCACCAAAGTAATATTTGCCTGGAAAAGGCTCATGACCATTCCAGAAGACGTAAG
JMFS120C09+ ACCTTCCACCAAAGTAATATTTGCCTGGAAAAGGCTCATGACCATTCCAGAAGGCGTAAG
____________________________________________________________
consensus ACCTTCCACCAAAGTAATATTTGCCTGGAAAAGGCTCATGACCATTCCAGAAGACGTAAG
. : . : . : . : . : . :
JMFF036G06+ TTTCAATAACATCAGCTCCTCCATCCTTTGCCAGTTGAACAAGTCCTGGCCACATGGCGG
JMFF031H14+ TTTCAATAACATCAGCTCCTCCATCCTTTGCCAGTTGAACAAGTCCTGGCCACATGGCGG
JMFS084E06+ TTTCAATAACATCAGCTCCTCCATCCTTTGCCAGTTGAACAAGTCCTGGCCACATGGCGG
JMFS120C09+ TTTCAATAACATCAGCTCCTCCATCCTTTGCCAGTTGAACAAGTCCTGGCCACATGGCGG
____________________________________________________________
consensus TTTCAATAACATCAGCTCCTCCATCCTTTGCCAGTTGAACAAGTCCTGGCCACATGGCGG
. : . : . : . : . : . :
JMFF036G06+ GGACGCTGCGGGGATAGTGAATGGAGGCGGAGATGAGCAGTTTCCGCTGGCCATTGATGA
JMFF031H14+ GGACGCTGCGGGGATAGTGAATGGAGGCGGAGATGAGCAGTTTCCGCTGGCCATTGATGA
JMFS084E06+ GGACGCTGCGGGGATAGTGAATGGAGGCGGAGATGAGCAGTTTCCGCTGGCCATTGATGA
JMFS120C09+ GGACGCTGCGGGGATAGTGAATGGAGGCGGAGATGAGCAGTTTCCGCTGGCCATTGATGA
____________________________________________________________
consensus GGACGCTGCGGGGATAGTGAATGGAGGCGGAGATGAGCAGTTTCCGCTGGCCATTGATGA
. : . : . : . : . : . :
JMFF036G06+ TCAGAGACCGCCGATCGTACGTCACGCTGTAATTACTGTTGTTATTAATAGCTGCACTAC
JMFF031H14+ TCAGAGACCGCCGATCGTACGTCACGCTGTAATTACTGTTGTTATTAATAGCAGCACTAC
JMFS084E06+ TCAGAGACCGCCGATCGTACGTCACGCTGTAATTACTGTTGTTATTAATAGCTGCACTAC
JMFS120C09+ TCAGAGACCGCCGATCGTACGTCACGCTGTAATTACTGTTGTTATTAATAGCTGCACTAC
____________________________________________________________
consensus TCAGAGACCGCCGATCGTACGTCACGCTGTAATTACTGTTGTTATTAATAGCTGCACTAC
. : . : . : . : . : . :
JMFF036G06+ TCGTAATTGTGGTGTTTGCAGCTGCTCCTCCGCCGGATGTGGCACTAGCTCCCGTAAGAA
JMFF031H14+ TCGTAATTGTGGTGTTTGCAGCTGCTCCTCCGCCGGATGTGGCACTAGCTCCCGTAAGAA
JMFS084E06+ TCGTAATTGTGGTGTTTGCAGCTGCTCCTCCGCCGGATGTGGCACTAGCTCCCGTAAGAA
JMFS120C09+ TCGTAATTGTGGTGTTTGCAGCTGCTCCTCCGCCGGATGTGGCACTAGCTCCCGTAAGAA
____________________________________________________________
consensus TCGTAATTGTGGTGTTTGCAGCTGCTCCTCCGCCGGATGTGGCACTAGCTCCCGTAAGAA
. : . : . : . : . : . :
JMFF036G06+ GTATGAGCAATGGCAGTAGTATAACTTTGCATTTGGATTTCCAAGAAGAGCGGTGGATGG
JMFF031H14+ GTATGAGCAATGGCAGTAGTATAACTTTGCATTTGGATTTCCAAGAAGAGCGGTGGATGG
JMFS084E06+ GTATGAGCAATGGCAGTAGTATAACTTTGCATTTGGATTTCCAAGAAGAGCGGTGGATGG
JMFS120C09+ GTATGAGCAATGGCAGTAGTATAACTTTGCATTTGGATTTCCAAGAAGAGCGGTGGATGG
____________________________________________________________
consensus GTATGAGCAATGGCAGTAGTATAACTTTGCATTTGGATTTCCAAGAAGAGCGGTGGATGG
. : . : . : . : . : . :
JMFF036G06+ AGGGCTTCATTGTGAACGCT
JMFF031H14+ AGGGCTTCATTGTGAACGCT
JMFS084E06+ AGGGCTTCATTGTGAACGCTATCGCCATTATTGGCTCTGAGCTTGCTGTTATATA
JMFS120C09+ AGGGCTTCATTGTGAACGCTATCGCCATTATTGGCTCTGAGCTTGCTGTTATATAGAGAT
____________________________________________________________
consensus AGGGCTTCATTGTGAACGCTATCGCCATTATTGGCTCTGAGCTTGCTGTTATATAGAGAT