Contig 013160:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS147A05+                                                               CACCCAAA
                      ____________________________________________________________
consensus                                                                 CACCCAAA
 
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JMFS147A05+           CCAACCCTCCCGCCGACGCATCAATAGATTTAGGGCAGCACTCAGCAGAACTTCCCATCA
JMFS120A04+                                   TAGATTTAGGGCAGCACTCAGCAGAACTTCCCATCA
                      ____________________________________________________________
consensus             CCAACCCTCCCGCCGACGCATCAATAGATTTAGGGCAGCACTCAGCAGAACTTCCCATCA
 
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JMFS147A05+           ATATACGATTAAAAAAATAAATAAAATAAACAAAATCCCTTAACAATTTAGTCTTGACCG
JMFS120A04+           ATATTCGATTAAAAAAATAAATAAAATAANCAAAATCCCTTAACAATTTAGTCTTGACCG
                      ____________________________________________________________
consensus             ATATTCGATTAAAAAAATAAATAAAATAAACAAAATCCCTTAACAATTTAGTCTTGACCG
 
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JMFS147A05+           AGCAACTCTATGCACGCATCACAAAACCCATAGCCAGGAAAAAAAAAAACCTAAAACCGA
JMFS120A04+           AGCAACTCTATGCACGCATCACAAAACCCATAGCCAGGAAAAAAAAAAACCTAAAACCGA
                      ____________________________________________________________
consensus             AGCAACTCTATGCACGCATCACAAAACCCATAGCCAGGAAAAAAAAAAACCTAAAACCGA
 
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JMFS147A05+           TGCAAATTTCGAACCCCAATGAAATTCGGGTGAAAAGGAATTGAAGGGTTCATGGAAAAG
JMFS120A04+           TGCAAATTTCGAACCCCAATGAAATTCGGGTGAAAAGGAATTGAAGGGTTCATGGAAAAG
                      ____________________________________________________________
consensus             TGCAAATTTCGAACCCCAATGAAATTCGGGTGAAAAGGAATTGAAGGGTTCATGGAAAAG
 
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JMFS147A05+           AAAAATGGATCTGAGAAAGAAAACATGAAGGGATTTCCAAAGG-AAAAAAAAAAAAAACA
JMFS120A04+           AAAAATGGATCTGAGAAAGAAAACATGAAGGGATTTCCAAAGGAAAAAAAAAAAAAAACA
                      ____________________________________________________________
consensus             AAAAATGGATCTGAGAAAGAAAACATGAAGGGATTTCCAAAGGAAAAAAAAAAAAAAACA
 
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JMFS147A05+           GATAATTTTAGCTTCTGTTAACTGTTCCTCAGAATTTACAGAGGTCTTTGAAAACCCAAG
JMFS120A04+           GATAATTTTAGCTTCTGTTAACTGTTCCTCAGAATTTACAGAGGTCTTTGAAAACCCAAG
                      ____________________________________________________________
consensus             GATAATTTTAGCTTCTGTTAACTGTTCCTCAGAATTTACAGAGGTCTTTGAAAACCCAAG
 
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JMFS147A05+           TTTACTCTTTATGCAAATTTTATTCCCAGATTTAAATTGCTCATGTTTTTAATCCTCTCT
JMFS120A04+           TTTACTCTTTATGCAAATTTTATTCCCAGATTTAAATTGCTCATGTTTTTAATCCTCTCT
                      ____________________________________________________________
consensus             TTTACTCTTTATGCAAATTTTATTCCCAGATTTAAATTGCTCATGTTTTTAATCCTCTCT
 
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JMFS147A05+           TGATAGACTGACTGACTGGACTTCACTTGGCTCTTTTTTTCGGTTTCTCGAAGTAAAGAA
JMFS120A04+           TGATAGACTGACTGACTGGACTTCACTTGGCTCTTTTTTTCGGTTTCTCGAAGTAAAGAA
                      ____________________________________________________________
consensus             TGATAGACTGACTGACTGGACTTCACTTGGCTCTTTTTTTCGGTTTCTCGAAGTAAAGAA
 
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JMFS147A05+           AAAATGGCGGAGAGAGAGAGAGAGCGCGCGCGTTGATGAAAAAAGTGTTGACGATGAACA
JMFS120A04+           AAAATGGCGGAGAGAGAGAGAGAGCGCGCGCGTTGATGAAAAAAGTGTTGACGATGAACA
                      ____________________________________________________________
consensus             AAAATGGCGGAGAGAGAGAGAGAGCGCGCGCGTTGATGAAAAAAGTGTTGACGATGAACA
 
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JMFS147A05+           GTGAAGTAGAGAGTTGGGTACTGTTGAGAAAACGAATCGGTGCCCGGGAGAGAGATCTCG
JMFS120A04+           GTGAAGTAGAGAGTTGGGTACTGTTGAGAAAACGAATCGGTGCCCGGGAGAGAGATCTCG
                      ____________________________________________________________
consensus             GTGAAGTAGAGAGTTGGGTACTGTTGAGAAAACGAATCGGTGCCCGGGAGAGAGATCTCG
 
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JMFS147A05+           GGGAGAGGATTGT                                               
JMFS120A04+           GGGAGAGGATTGTGATTATTTCTCTTTTCTTTTTTTTGCTGGGGGAGGGGAGAACTGGAG
                      ____________________________________________________________
consensus             GGGAGAGGATTGTGATTATTTCTCTTTTCTTTTTTTTGCTGGGGGAGGGGAGAACTGGAG