Contig 013159:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS017B03Sequence543013159 (2)gb|KCW88048.1|3e-71hypothetical protein EUGRSUZ_A004731, partial [Eucalyptus grandis] gb|KCW88049.1
JMFS118H08Sequence557013159 (2)gb|KCW88048.1|6e-68hypothetical protein EUGRSUZ_A004731, partial [Eucalyptus grandis] gb|KCW88049.1

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS017B03+                                                               TTTGCAGA
JMFS118H08+                                                      CAATACATCTTTGCAGA
                      ____________________________________________________________
consensus                                                        CAATACATCTTTGCAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS017B03+           GGTTTAAGATGCAAAGCAAAAGGCGATTCCTGTCATCAACGTTGCGCATTGTCCATTGAG
JMFS118H08+           GGTTTAGGATGCAAAGCAAAAGGCGATTCCTGTCATCAACGTTGCGCAATGTCCATTGAG
                      ____________________________________________________________
consensus             GGTTTAGGATGCAAAGCAAAAGGCGATTCCTGTCATCAACGTTGCGCATTGTCCATTGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS017B03+           GGGGAGCTACAGATGCACTTCTAAGATTATCAAATCCCAGAGTAAATGTACAGCCACTTG
JMFS118H08+           GGGGAGCTACAGATGCACTTCTAAGATTATCAAATCCCAGAGTAAATGTACAGCCACTTG
                      ____________________________________________________________
consensus             GGGGAGCTACAGATGCACTTCTAAGATTATCAAATCCCAGAGTAAATGTACAGCCACTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS017B03+           GATCATTAGTTACAACCTCCACCTTTGAAAGATGCTTCAGCTTATACAACTTGGCAGGCT
JMFS118H08+           GATCATTAGTTACAACCTCCACCTTTGAAAGATGCTTCAGCTTATACAACTTGGCAGGCT
                      ____________________________________________________________
consensus             GATCATTAGTTACAACCTCCACCTTTGAAAGATGCTTCAGCTTATACAACTTGGCAGGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS017B03+           CAAGAACACCTCCAGTGGAATACTTTAGCACACGTAGAAAAGCTCTAGTCTGCTGACCTT
JMFS118H08+           CAAGAACACCTCCAGTGGAATACTTTAGCACACGTAGAAAAGCTCTAGTCTGCTGACCTT
                      ____________________________________________________________
consensus             CAAGAACACCTCCAGTGGAATACTTTAGCACACGTAGAAAAGCTCTAGTCTGCTGACCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS017B03+           TTTCTTTTGCGGAAATAGCTAGAACCCTAGGTTTGGCCATTTGACCGCGGCCTAACTTGC
JMFS118H08+           TTTCTTTTGCGGAAATAGCTAGAACCCTAGGTTTGGCCATTTGACCGCGGCCTAACTTGC
                      ____________________________________________________________
consensus             TTTCTTTTGCGGAAATAGCTAGAACCCTAGGTTTGGCCATTTGACCGCGGCCTAACTTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS017B03+           TTCCCGGTTTGCCCCAGATCCCGCGGCTCTTGGCGACTCGGATCGACATTAAGACCGTCT
JMFS118H08+           TTCCCGGTTTGCCCCAGATCCCGCGGCTCTTGGCGACTCGGATCGACATTAAGACCGTCT
                      ____________________________________________________________
consensus             TTCCCGGTTTGCCCCAGATCCCGCGGCTCTTGGCGACTCGGATCGACATTAAGACCGTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS017B03+           GCTTGGTGCTTTCTATCACCACCTCGCAGGCTCTCCGGAGCTCCTCATCGTCGGCGCTGG
JMFS118H08+           GCTTGGTGCTTTCTATCACCACCTCGCAGGCTCTCCGGAGCTCCTCATCGTCGGCGCTGG
                      ____________________________________________________________
consensus             GCTTGGTGCTTTCTATCACCACCTCGCAGGCTCTCCGGAGCTCCTCATCGTCGGCGCTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS017B03+           ATTTCGCCATTCACTAACTAATCTCTCTCTCTCTCTCTTCCGGCCTCCTAGCTCGCCTGC
JMFS118H08+           ATTTCGCCATTCACTAACTAATCTCTCTCTCTCTCTCTTCCGGCCTCCTAGCTCGCCTGC
                      ____________________________________________________________
consensus             ATTTCGCCATTCACTAACTAATCTCTCTCTCTCTCTCTTCCGGCCTCCTAGCTCGCCTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS017B03+           AATAAGGAGAATTGGACAAGGTGATCCTGAATTTTCCGGGAGAAATTCAGTCTAC     
JMFS118H08+           AATAAGGAGAATTGGACAAGGTGATCCTGAATTTTCCGGGAGAAATTCAGTCTACACGAG
                      ____________________________________________________________
consensus             AATAAGGAGAATTGGACAAGGTGATCCTGAATTTTCCGGGAGAAATTCAGTCTACACGAG