| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN017A12 | Sequence | 617 | 013155 (8) | ref|XP_009759852.1| | 256 | PREDICTED: uncharacterized protein LOC104212331 [Nicotiana sylvestris] | |||||
| JMFN025E17 | Sequence | 470 | 013155 (8) | ref|XP_008389028.1| | 62.0 | PREDICTED: uncharacterized protein LOC103451397 [Malus domestica] | |||||
| JMFN025E22 | Sequence | 434 | 013155 (8) | ref|XP_011078122.1| | 68.2 | PREDICTED: uncharacterized protein LOC105161942 [Sesamum indicum] | |||||
| JMFN025E23 | Sequence | 625 | 013155 (8) | ref|XP_009759852.1| | 282 | PREDICTED: uncharacterized protein LOC104212331 [Nicotiana sylvestris] | |||||
| JMFN025G19 | Sequence | 635 | 013155 (8) | ref|XP_009759852.1| | 286 | PREDICTED: uncharacterized protein LOC104212331 [Nicotiana sylvestris] | |||||
| JMFS108F03 | Sequence | 627 | 013155 (8) | ref|XP_009627314.1| | 171 | PREDICTED: uncharacterized protein LOC104117889 [Nicotiana tomentosiformis] | |||||
| JMSF008M05 | Sequence | 365 | 013155 (8) | ref|XP_009759852.1| | 86.3 | PREDICTED: uncharacterized protein LOC104212331 [Nicotiana sylvestris] | 816 | 013155 (8) | ref|XP_009759852.1| | 285 | PREDICTED: uncharacterized protein LOC104212331 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMSF008M05- AGCGTTCACAAGGGATACCAAGAAACATTTCAAATCAGAGTTCATTA
____________________________________________________________
consensus AGCGTTCACAAGGGATACCAAGAAACATTTCAAATCAGAGTTCATTA
. : . : . : . : . : . :
rJMSF008M05- TGATAAATCTGCAATGGTAAACATACTGACATGAAATAAGAGGAGATCCAGACTAGGATG
____________________________________________________________
consensus TGATAAATCTGCAATGGTAAACATACTGACATGAAATAAGAGGAGATCCAGACTAGGATG
. : . : . : . : . : . :
JMFN025G19+ CAGCAAAGGTGAGCAAAGATATCAGCGACTCGTATTCTGGGAAGCATGATACGAGGT
JMFN025E23+ GAGCAAAGATATCAGCGACTCGTATTCTGGGAAGCATGATACGAGGT
rJMSF008M05- TCTCAGCAAAGGTGAGCAAAGATATCAGCGACTCGTATTCTGGGAAGCATGATACGAGGT
____________________________________________________________
consensus TCTCAGCAAAGGTGAGCAAAGATATCAGCGACTCGTATTCTGGGAAGCATGATACGAGGT
. : . : . : . : . : . :
JMFN025G19+ AAGATCGTTTTGCAAGCTCGAAATCATCAAACTGGAAGGCAGGAGCACACGTACATCCAA
JMFN025E23+ AAGATCGTTTTGCAAGCTCGAAATCATCAAACTGGAAGGCAGGAGCACACGTACATCCAA
JMFN017A12+ TTGCAAGCTCGAAATCATCAAACTGGAAGGCAGGAGCACACGTACATCCAA
rJMSF008M05- AAGATCGTTTTGCAAGCTCGAAATCATCAAACTGGAAGGCAGGAGCACACGTACATCCAA
____________________________________________________________
consensus AAGATCGTTTTGCAAGCTCGAAATCATCAAACTGGAAGGCAGGAGCACACGTACATCCAA
. : . : . : . : . : . :
JMFN025G19+ CTAACGCGAAGTCCTTCTCAGCGTCTCTTGGAGGATTTTTGACAGCTTTCTTCTTGTCAG
JMFN025E23+ CTAACGCGAAGTCCTTCTCAGCGTCTCTTGGAGGATTTTTGACAGCTTTCTTCTTGTCAG
JMFN017A12+ CTAACGCGAAGTCCTTCTCAGCGTCTCTTGGAGGATTTTTGACAGCTTTCTTCTTGTCAG
rJMSF008M05- CTAACGCGAAGTCCTTCTCAGCGTCTCTTGGAGGATTTTTGACAGCTTTCTTCTTGTCAG
____________________________________________________________
consensus CTAACGCGAAGTCCTTCTCAGCGTCTCTTGGAGGATTTTTGACAGCTTTCTTCTTGTCAG
. : . : . : . : . : . :
JMFN025G19+ CAGAGATGTCGATATCCTTTGTTGGGAAAGCACCAAACCATACATTTGGAGGAACTGTGT
JMFN025E23+ CAGAGATGTCGATATCCTTTGTTGGGAAAGCACCAAACCATACATTTGGAGGAACTGTGT
JMFN017A12+ CAGAGATGTCGATATCCTTTGTTGGGAAAGCACCAAACCATAAATTTGGAGGAACTGTGT
rJMSF008M05- CAGAGATGTCGATATCCTTTGTTGGGAAAGCACCAAACCATACATTTGGAGAAACTGTGT
____________________________________________________________
consensus CAGAGATGTCGATATCCTTTGTTGGGAAAGCACCAAACCATACATTTGGAGGAACTGTGT
. : . : . : . : . : . :
JMFN025G19+ ACTGCACTTGTTGATTGTCTGCCAGGGGATCAGGCCCGATGCCTGTTAACTTCACACTAC
JMFN025E23+ ACTGCACTTGTTGATTGTCTGCCAGGGGATCAGGCCCGATGCCTGTTAACTTCACACTAC
JMFN025E22+ ACACTAC
JMFN017A12+ ACTGCACTTGTTGATTGTCTGCCAGGGGATCAGGCCCGATGCCTGTTAACTTCACACTAC
rJMSF008M05- ACTGCACTTGTTGATTGTCTGCCAGGGGATCAGGCCCGATGCCTGTTAACTTCACACTAC
JMFS108F03+ AGGCCCGATGCCTGTTAACTTCACACTAC
____________________________________________________________
consensus ACTGCACTTGTTGATTGTCTGCCAGGGGATCAGGCCCGATGCCTGTTAACTTCACACTAC
. : . : . : . : . : . :
JMFN025G19+ CATCAGTCTCGTTTAGCTCTACCACCGTAATAGATTCTCCTGTGTAAAAGTGCCATGTTT
JMFN025E23+ CATCAGTCTCGTTTAGCTCTACCACCGTAATAGATTCTCCTGTGTAAAAGTGCCATGTTT
JMFN025E22+ CATCAGTCTCGTTTAGCTGTACCGCCGTAATCGATTCTCCGGTGTGAAAGTGCCATGCTT
JMFN025E17+ GTAATAGTGCCATGTTT
JMFN017A12+ CATCAGTCTCGTTTAGCTCTACCACCGTAATAGATTCTCCTGTGTAAAAGTGCCATGTTT
rJMSF008M05- CATCAGTCTCGTTTAGCTCTACCACCGTAATAGATTCTCCTGTGTAAAAGTGCCATGTTT
JMFS108F03+ CATCAGTCTCGTTTAGCTCTACCACCGTAATAGATTCTCCTGTGTAAAAGTGCCATGTTT
____________________________________________________________
consensus CATCAGTCTCGTTTAGCTCTACCACCGTAATAGATTCTCCTGTGTAAAAGTGCCATGTTT
. : . : . : . : . : . :
JMFN025G19+ CTGCCATTGGGATTCGGTGCAAGTGAGAAACACTCCCAGAAGGCAGCAAGAAGTAAATA-
JMFN025E23+ CTGCCATTGGGATTCGGTGCAAGTGAGAAACACTCCCAGAAGGCAGCAAGAAGTAAATA-
JMFN025E22+ CTCCCATTGGGATTCGGCGCAAGTGTGAAACACTCCCAGAAGGCAGCAAGGAGTAAATAG
JMFN025E17+ CTGGCATTGGGATTCGGAACAAGTGAGAAACACTCCCAGAAGTCAGCAAGAAGTAAATA-
JMFN017A12+ CTGCCATTGGGATTCGGTGCAAGTGAGAAACACTCCCAGAAGGCAGCAAGAAGTAAATA-
rJMSF008M05- CTGCCATTGGGATTCGGTGCAAGTGAGAAACACTCCCAGAAGGCAGCAAGAAGTAAATA-
JMSF008M05+ A-
JMFS108F03+ CTGCCATTGGGATTCGGTGCAAGTGAGAAACACTCCCAGAAGGCAGCAAGAAGTAAATA-
____________________________________________________________
consensus CTGCCATTGGGATTCGGTGCAAGTGAGAAACACTCCCAGAAGGCAGCAAGAAGTAAATA-
. : . : . : . : . : . :
JMFN025G19+ GATGTACTCACAGGTCGATCAACCTTGTAA-GTAGGGGGGAGATGAGATTTAGAGAGGTG
JMFN025E23+ GATGTACTCACAGGTCGATCAACCTTGTAA-GTAGGGGGGAGATGAGATTTAGAGAGGTG
JMFN025E22+ GATGTGCTCGCAGGTCGATCACCCTGGTAAGGTAGGGGGGAGATGAGATTTAGAGAGGTG
JMFN025E17+ GATGTACTC
JMFN017A12+ GATGTACTCACAGGTCGATCAACCTTGTAA-GTAGGGGGGAGATGAGATTTAGAGAGGTG
rJMSF008M05- GATGTACTCACAGGTCGATCAACCTTGTAA-GTAGGGGGGAGATGAGATTTAGAGAGGTG
JMSF008M05+ GATGTACTCACAGGTCGATCAACCTTGTAA-GTAGGGGGGAGATGAGATTTAGAGAGGTG
JMFS108F03+ GATGTACTCACAGGTCGATCAACCTTGTAA-GTAGGGGGGAGATGAGATTTAGAGAGGTG
____________________________________________________________
consensus GATGTACTCACAGGTCGATCAACCTTGTAA-GTAGGGGGGAGATGAGATTTAGAGAGGTG
. : . : . : . : . : . :
JMFN025G19+ CACGGAGAAGTCTCTGAAGGTTTCAGAATAGAAGCCGCCTTCTGGGTGCGACTTCAGATC
JMFN025E23+ CACGGAGAAGTCTCTGAAGGTTTCAGAATAGAAGCCGCCTTCTGGGTGCGACTTCAGATC
JMFN025E22+ CGGGGCGAAGTCTGTGAAGGTTTCAGAATAGAAGCCGCCTTGTGGGTGCGGCTTCAGAT
JMFN017A12+ CACGGAGAAGTCTCTGAAGGTTTCAGAATAGAAGCCGCCTTCTGGGTGCGACTTCAGATC
rJMSF008M05- CACGGAGAAGTCTCTGAAGGTTTCAGAATAGAAGCCGCCTTCTGGGTGCGACTTCAGATC
JMSF008M05+ CACGGAGAAGTCTCTGAAGGTTTCAGAATAGAAGCCGCCTTCTGGGTGCGACTTCAGATC
JMFS108F03+ CACGGAGAAGTCTCTGAAGGTTTCAGAATAGAAGCCGCCTTCTGGGTGCGACTTCAGATC
____________________________________________________________
consensus CACGGAGAAGTCTCTGAAGGTTTCAGAATAGAAGCCGCCTTCTGGGTGCGACTTCAGATC
. : . : . : . : . : . :
JMFN025G19+ CAGTTTAGCTACAAGCTTCGAGACAGTTGAATCCATTTGATTGAGAATTGAGAATTGAGA
JMFN025E23+ CAGTTTAGCTACAAGCTTCGAGACAGTTGAATCCATTTGATTGAGAATTGAGAATTGAGA
JMFN017A12+ CAGTTTAGCTACAAGCTTCGAGACAGTTGAATCCATTTGATTGAGAATTGAGAATTGAGA
rJMSF008M05- CAGTTTAGCTACAAGCTTCGAGACAGTTGAATCCATTTGATTGAGAATTGAGAATTGAGA
JMSF008M05+ CAGTTTAGCTACAAGCTTCGAGACAGTTGAATCCATTTGATTGAGAATTGAGAATTGAGA
JMFS108F03+ CAGTTTAGCTACAAGCTTCGAGACAGTTGAATCCATTTGATTGAGAATTGAGAATTGAGA
____________________________________________________________
consensus CAGTTTAGCTACAAGCTTCGAGACAGTTGAATCCATTTGATTGAGAATTGAGAATTGAGA
. : . : . : . : . : . :
JMFN025G19+ ATTGAGATTGCTTCTGACAGTGTAATCAATCAGAGGACAA
JMFN025E23+ ATTGAGATTGCTTCTGACAGTGTAATCAATCAGAGGACAA
JMFN017A12+ ATTGAGATTGCTTCTGACAGTGTAATCAATCAGAGGACAAAGGTTTCACTTAGGCTTTCC
rJMSF008M05- ATTGAGATTGCTTCTGACAGTGTAATCAATCAGAGGACAAAGGTTTCACTTAGGCTTTCC
JMSF008M05+ ATTGAGATTGCTTCTGACAGTGTAATCAATCAGAGGACAAAGGTTTCACTTAGGCTTTCC
JMFS108F03+ ATTGAGATTGCTTCTGACAGTGTAATCAATCAGAGGACAAAGGTTTCACTTAGGCTTTCC
____________________________________________________________
consensus ATTGAGATTGCTTCTGACAGTGTAATCAATCAGAGGACAAAGGTTTCACTTAGGCTTTCC
. : . : . : . : . : . :
JMFN017A12+ TAGATTACCTTTACCTTTTTTCTTACTC
rJMSF008M05- TAGATTACCTTTACCTTTTTTCTNACTCCTATCC
JMSF008M05+ TAGATTACCTTTACCTTTTTTCTTACTCCTATCCCATCCTATCCTATTCTCGGAGTCTCA
JMFS108F03+ TAGATTACCTTTACCTTTTTTCTTACTCCTATCCCATCCTATCCTATTCTCGGAGTCTCA
____________________________________________________________
consensus TAGATTACCTTTACCTTTTTTCTTACTCCTATCCCATCCTATCCTATTCTCGGAGTCTCA
. : . : . : . : . : . :
JMSF008M05+ GGTTGTTCCTTGTTGGAGTCCAACAATGCGGCTTTTCGGGTGGTTGGAGAAAATGACGGT
JMFS108F03+ GGTTGTTCCTTGTTGGAGTCCAACAATGCGGCTTTTCGGGTGGTTGGAGAAAATGACGGT
____________________________________________________________
consensus GGTTGTTCCTTGTTGGAGTCCAACAATGCGGCTTTTCGGGTGGTTGGAGAAAATGACGGT
. : . : . : . : . : . :
JMSF008M05+ TGG
JMFS108F03+ TGGCAAAGGGCCTAATCACTGCACAATTTCTTAGTACACTTTTTTCCGATACGAGGTTGT
____________________________________________________________
consensus TGGCAAAGGGCCTAATCACTGCACAATTTCTTAGTACACTTTTTTCCGATACGAGGTTGT
. : . : . : . : . : . :
JMFS108F03+ CTTCACTCCCATTTTTCTACTGTCAAAACCAAACTCCATGACTTTCTGACCCAAACTCCA
____________________________________________________________
consensus CTTCACTCCCATTTTTCTACTGTCAAAACCAAACTCCATGACTTTCTGACCCAAACTCCA