| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF019E09 | Sequence | 573 | 013154 (8) | emb|CDP02303.1| | 1e-59 | unnamed protein product [Coffea canephora] | 755 | 006143 (7) | ref|XP_009603901.1| | 7e-107 | PREDICTED: chaperone protein ClpB3, chloroplastic [Nicotiana tomentosiformis] |
| JMFF021B18 | Sequence | 334 | 013154 (8) | emb|CDP02303.1| | 2e-11 | unnamed protein product [Coffea canephora] | 712 | 006143 (7) | ref|XP_009603901.1| | 1e-92 | PREDICTED: chaperone protein ClpB3, chloroplastic [Nicotiana tomentosiformis] |
| JMFS029G10 | Sequence | 623 | 013154 (8) | emb|CDP02303.1| | 9e-99 | unnamed protein product [Coffea canephora] | |||||
| JMFS066C11 | Sequence | 627 | 013154 (8) | emb|CDP02303.1| | 4e-75 | unnamed protein product [Coffea canephora] | |||||
| JMFS108C09 | Sequence | 609 | 013154 (8) | emb|CDP02303.1| | 2e-26 | unnamed protein product [Coffea canephora] | |||||
| JMFS135D06 | Sequence | 646 | 013154 (8) | emb|CDP02303.1| | 3e-54 | unnamed protein product [Coffea canephora] | |||||
| JMSF033J01 | Sequence | 688 | 013154 (8) | emb|CDP02303.1| | 2e-62 | unnamed protein product [Coffea canephora] | 744 | 006143 (7) | ref|XP_009603901.1| | 7e-86 | PREDICTED: chaperone protein ClpB3, chloroplastic [Nicotiana tomentosiformis] |
| JMSF036C24 | Sequence | 643 | 013154 (8) | emb|CDP02303.1| | 3e-48 | unnamed protein product [Coffea canephora] | 523 | 006143 (7) | gb|AAN17424.1| | 5e-79 | HSP100/ClpB, putative [Arabidopsis thaliana] gb|AAO00929.1| HSP100/ClpB, putativ |
This contig is upended
. : . : . : . : . : . :
JMFS029G10+ TGATCAATAACAGTTTGGCGTCCCCTTATGGCTGTATGGC
____________________________________________________________
consensus TGATCAATAACAGTTTGGCGTCCCCTTATGGCTGTATGGC
. : . : . : . : . : . :
JMFS029G10+ ATCTCNTTAGAGTCCTTTCAGCAATTTGAAAATCTCTGAACAGCTGCTTCCCAAATCTCC
____________________________________________________________
consensus ATCTCNTTAGAGTCCTTTCAGCAATTTGAAAATCTCTGAACAGCTGCTTCCCAAATCTCC
. : . : . : . : . : . :
JMFS029G10+ TATCTTGTAAAAAGCCAAGCACCATATGCTCCACTGACACAAACGAATCACCGTACTCTT
____________________________________________________________
consensus TATCTTGTAAAAAGCCAAGCACCATATGCTCCACTGACACAAACGAATCACCGTACTCTT
. : . : . : . : . : . :
JMFS029G10+ TCTTGAAATCCCGGGCACGCTGTATCAAGGCTTCTAAGTCTCGCCCCAACATCGATCCCG
JMFS066C11+ GCACGCTGTATCAAGGCTTCTAAGTCTCGCCCCAACATCGATCCCG
JMSF036C24+ GCACGCTGTATCAAGGCTTCTAAGTCTCGCCCCAACATCGATCCCG
____________________________________________________________
consensus TCTTGAAATCCCGGGCACGCTGTATCAAGGCTTCTAAGTCTCGCCCCAACATCGATCCCG
. : . : . : . : . : . :
JMFS029G10+ CTGACTCACCGAGAACCTTTGGTTGGCGATCGATGAACCGCACGGTGGATTCAAGCAGAC
JMFS066C11+ CTGACTCACCGAGAACCTTTGGTTGGCGATCGATGAACCGCACGGTGGATTCAAGCAGAC
JMSF036C24+ CTGACTCACCGAGAACCTTTGGTTGGCGATCGATGAACCGCACGGTGGATTCAAGCAGAC
JMFF019E09+ TTGGCGATCGATGAACCGCACGGTGGATTCAAGCAGAC
JMSF033J01+ TCACCGAGAACCTTTGGTTGGCGATCGATGAACCGCACGGTGGATTCAAGCAGAC
JMFS135D06+ TCAAGCAGAC
____________________________________________________________
consensus CTGACTCACCGAGAACCTTTGGTTGGCGATCGATGAACCGCACGGTGGATTCAAGCAGAC
. : . : . : . : . : . :
JMFS029G10+ GGGTATTATCTACACCGGCCTTGG-AAAAAATCCGGCGAGCAAGCCCATTCTTTTGCTCC
JMFS066C11+ GGGTATTATCTACACCGGCCTTGG-AAAAAATCCGGCGAGCAAGCCCATTCTTTTGCTCC
JMSF036C24+ GGGTATTATCTACACCGGCCTTGGAAAAAAATCCGGCGAGCAAGCCCATTCTTTTGCTCC
JMFF019E09+ GGGTATTATCTACACCGGCCTTGG-AAAAAATCCGGCGAGCAAGCCCATTCTTTTGCTCC
JMSF033J01+ GGGTATTATCTACACCGGCCTTGG-AAAAAATCCGGCGAGCAAGCCCATTCTTTTGCTCC
JMFS135D06+ GGGTATTATCTACACCGGCCTTGG-ANANAATCCGGCGAGCAAGCCCATTCTTTTGCTCC
____________________________________________________________
consensus GGGTATTATCTACACCGGCCTTGG-AAAAAATCCGGCGAGCAAGCCCATTCTTTTGCTCC
. : . : . : . : . : . :
JMFS029G10+ AACAGCGCCTTCATCAAATGCTCCGTCTCCACTATCTGGTGCTTGTTTTCTTTCGCCACC
JMFS066C11+ AACAGCGCCTTCATCAAATGCTCCGTCTCCACTATCTGGTGCTTGTTTTCTTTCGCCACC
JMSF036C24+ AACAGCGCCTTCATCAAATGCTCCGTCTCCACTATCTGGTGCTTGTTTTCTTTCGCCACC
JMFF019E09+ AACAGCGCCTTCATCAAATGCTCCGTCTCCACTATCTGGTGCTTGTTTTCTTTCGCCACC
JMSF033J01+ AACAGCGCCTTCATCAAATGCTCCGTCTCCACTATCTGGTGCTTGTTTTCTTTCGCCACC
JMFS135D06+ AACAGCGCCTTCATCAAATGCTCCGTCTCCACTATCTGGTGCTTGTTTTCTTTCGCCACC
JMFS108C09+ TTCGCCACC
____________________________________________________________
consensus AACAGCGCCTTCATCAAATGCTCCGTCTCCACTATCTGGTGCTTGTTTTCTTTCGCCACC
. : . : . : . : . : . :
JMFS029G10+ TCCGGCGACGAAACTATAGCTTGCCACGCCATTTCCGTAAACTCTTGCTGCGTAACTGCC
JMFS066C11+ TCCGGCGACGAAACTATAGCTTGCCACGCCATTTCCGTAAACTCTTGCTGCGTAACTGCC
JMSF036C24+ TCCGGCGACGAAACTATAGCTTGCCACGCCATTTCCGTAAACTCTTGCTGCGTAACTGCC
JMFF019E09+ TCCGGCGACGAAACTATAGCTTGCCACGCCATTTCCGTAAACTCTTGCTGCGTAACTGCC
JMSF033J01+ TCCGGCGACGAAACTATAGCTTGCCACGCCATTTCCGTAAACTCTTGCTGCGTAACTGCC
JMFS135D06+ TCCGGCGACGAAACTATAGCTTGCCACGCCATTTCCGTAAACTCTTGCTGCGTAACTGCC
JMFS108C09+ TCCGGCGACGAAACTATAGCTTGCCACGCCATTTCCGTAAACTCTTGCTGCGTAACTGCC
____________________________________________________________
consensus TCCGGCGACGAAACTATAGCTTGCCACGCCATTTCCGTAAACTCTTGCTGCGTAACTGCC
. : . : . : . : . : . :
JMFS029G10+ TTTCCGCTAGCAGCATCGCATCGTACAATAAACGACCTCGAGCTTTTCCCATGTGTATCA
JMFS066C11+ TTTCCGCTAGCAGCATCGCATCGTACAATAAACGACCTCGAGCTTTTCCCATGTGTATCA
JMSF036C24+ TTTCCGCTAGCAGCATCGCATCGTACAATAAACGACCTCGAGCTTTTCCCATGTGTATCA
JMFF019E09+ TTTCCGCTAGCAGCATCGCATCGTACAATAAACGACCTCGAGCTTTTCCCATGTGTATCA
JMSF033J01+ TTTCCGCTAGCAGCATCGCATCGTACAATAAACGACCTCGAGCTTTTCCCATGTGTACCA
JMFF021B18+ GTACAATAAACGACCTCGAGCTTTTCCCATGTGTATCA
JMFS135D06+ TTTCCGCTAGCAGCATCGCATCGTACAATAAACGACCTCGAGCTTTTCCCATGTGTATCA
JMFS108C09+ TTTCCGCTAGCAGCATCGCATCGTACAATAAACGACCTCGAGCTTTTCCCATGTGTATCA
____________________________________________________________
consensus TTTCCGCTAGCAGCATCGCATCGTACAATAAACGACCTCGAGCTTTTCCCATGTGTATCA
. : . : . : . : . : . :
JMFS029G10+ ACATTCCTGGTAAAAATCGGATATTTCCTCTTCAATTCAAGCGAACTTAGGGTTCTGAGC
JMFS066C11+ ACATTCCTGGTAAAAATCGGATATTTCCTCTTCAATTCAAGCGAACTTAGGGTTCTGAGC
JMSF036C24+ ACATTCCTGGTAAAAATCGGATATTTCCTCTTCAATTCAAGCGAACTTAGGGTTCTGAGC
JMFF019E09+ ACATTCCTGGTAAAAATCGGATATTTCCTCTTCAATTCAAGCGAACTTAGGGTTCTGAGC
JMSF033J01+ ACATTCCTGGTAAAAATCGGATATTTCCTCTTCAATTCAAGCGAACTTAGGGTTCTGAGC
JMFF021B18+ ACATTCCTGGTAAAAATCGGATATTTCCTCTTCAATTCAAGCGAACTTAGGGTTNTGAGC
JMFS135D06+ ACATTCCTGGTAAAAATCGGATATTTCCTCTTCAATTCAAGCGAACTTAGGGTTCTGAGC
JMFS108C09+ ACATTCCTGGTAAAAATCGGATATTTCCTCTTCAATTCAAGCGAACTTAGGGTTCTGAGC
____________________________________________________________
consensus ACATTCCTGGTAAAAATCGGATATTTCCTCTTCAATTCAAGCGAACTTAGGGTTCTGAGC
. : . : . : . : . : . :
JMFS029G10+ CCCCGAGGCTTGGTTGAGACGTTAACGGATACGGGCGGCTGAAA
JMFS066C11+ CCCCGAGGCTTGGTTGAGACGTTAACGGATACGGGCGGCTGAAAAGAAACCGGAGCTGCT
JMSF036C24+ CCCCGAGGCTTGGTTGAGACGTTAACGGATACGGGCGGCTGAAAAGAAACCGGAGCTGCT
JMFF019E09+ CCCCGAGGCTTGGTTGAGACGTTAACGGATACGGGCGGCTGAAAAGAAACCGGAGCTGCT
JMSF033J01+ CCCCGAGGCTTGGTTGAGACGTTAACGGATACGGGCGGCTGAAAAGAAACCGGAGCTGCT
JMFF021B18+ CCCCGAGGCTTGGTTGAGACGTTAACGGATACGGGCGGCTGAAAAGAAACCGGAGCTGCT
JMFS135D06+ CCCCGAGGCTTGGTTGAGACGTTAACGGATACGGGCGGCTGAAAAGAAACCGGAGCTGCT
JMFS108C09+ CCCCGAGGCTTGGTTGAGACGTTAACGGATACGGGCGGCTGAAAAGAAACCGGAGCTGCT
____________________________________________________________
consensus CCCCGAGGCTTGGTTGAGACGTTAACGGATACGGGCGGCTGAAAAGAAACCGGAGCTGCT
. : . : . : . : . : . :
JMFS066C11+ CTATTGGACGGCTGGACGCAACACTGGACACCGGAAAACGACGTCGTTGTCGCCATGGAC
JMSF036C24+ CTATTGGACGGCTGGACGCAACACTGGACACCGGAAAACGACGTCGTTGTCGCCATGGAC
JMFF019E09+ CTATTGGACGGCTGGACGCAACACTGGACACCGGAAAACGACGTCGTTGTCGCCATGGAC
JMSF033J01+ CTATTGGACGGCTGGACGCAACACTGGACACCGGAAAACGACGTCGTTGTCGCCATGGAC
JMFF021B18+ CTATTGGACGGCTGGACGCAACACTGGACACCGGAAAACGACGTCGTTGTCGCCATGGAC
JMFS135D06+ CTATTGGACGGCTGGACGCAACACTGGACACCGGAAAACGACGTCGTTGTCGCCATGGAC
JMFS108C09+ CTATTGGACGGCTGGACGCAACACTGGACACCGGAAAACGACGTCGTTGTCGCCATGGAC
____________________________________________________________
consensus CTATTGGACGGCTGGACGCAACACTGGACACCGGAAAACGACGTCGTTGTCGCCATGGAC
. : . : . : . : . : . :
JMFS066C11+ GGTGTTTCTCCGGAGAGCAATACGGAAGTATGGAAATCTGAGCGTTTTCCGGCAAATCGC
JMSF036C24+ GGTGTTTCTCCGGAGAGCAATACGGAAGTATGGAAATCTGAGCGTTTTCCGGCAAATCGC
JMFF019E09+ GGTGTTTCTCCGGAGAGCAATACGGAAGTATGGAAATCTGAGCGTTTTCCGGCAAATCGC
JMSF033J01+ GGTGTTTCTCCGGAGAGCAATACGGAAGTATGGAAATCTGAGCGTTTTCCGGCAAATCGC
JMFF021B18+ GGTGTTTCTCCGGAGAGCAATACGGAAGTATGGAAATCTGAGCGTTTTCCGGCAAATCGC
JMFS135D06+ GGTGTTTCTCCGGAGAGCAATACGGAAGTATGGAAATCTGAGCGTTTTCCGGCAAATCGC
JMFS108C09+ GGTGTTTCTCCGGAGAGCAATACGGAAGTATGGAAATCTGAGCGTTTTCCGGCAAATCGC
____________________________________________________________
consensus GGTGTTTCTCCGGAGAGCAATACGGAAGTATGGAAATCTGAGCGTTTTCCGGCAAATCGC
. : . : . : . : . : . :
JMFS066C11+ GGGAGACGACGGAATCACAAAAATGAGAGGTGAAGAAGA
JMSF036C24+ GGGAGACGACGGAATCACAAAAATGAGAGGTGAAGAAGATTTGATTGAGGTATTTC
JMFF019E09+ GGGAGACGACGGAATCACAAAAATGAGAGGTGAAGAAGATTTGATTGAGGTATT
JMSF033J01+ GGGAGACGACGGAATCACAAAAATGAGAGGTGAAGAAGATTTGATTGAGGTATTTCGATG
JMFF021B18+ GGGAGACGACGGAATCACAAAAATGAGAGGTGAAGAAGATTTGATTGAGGTATT
JMFS135D06+ GGGAGACGACGGAATCACAAAAATGAGAGGTGAAGAAGATTTGATTGAGGTATTTCGATG
JMFS108C09+ GGGAGACGACGGAATCACAAAAATGAGAGGTGAAGAAGATTTGATTGAGGTATTTCGATG
____________________________________________________________
consensus GGGAGACGACGGAATCACAAAAATGAGAGGTGAAGAAGATTTGATTGAGGTATTTCGATG
. : . : . : . : . : . :
JMSF033J01+ GCAATCGATCACTCTCGTAGGTTAAATCCCATTGCAATTCGGAAAAATGATAAAAGTTAG
JMFS135D06+ GCAATCGATCACTCTCGTAGGTTAAATCCCATTGCAATTCGGAAAAATGATAAAAGTTAG
JMFS108C09+ GCAATCGATCACTCTCGTAGGTTAAATCCCATTGCAATTCGGAAAAATGATAAAAGTTAG
____________________________________________________________
consensus GCAATCGATCACTCTCGTAGGTTAAATCCCATTGCAATTCGGAAAAATGATAAAAGTTAG
. : . : . : . : . : . :
JMSF033J01+ AGCGTTCCCGAAGGTGCGAGAACCTGAAAGC
JMFS135D06+ AGCGTTCCCGAAGGTGCGAGAACCTGAAAGC
JMFS108C09+ AGCGTTCCCGAAGGTGCGAGAACCTGAAAGCGTTCCGATGCTGTGCACGAAGCCGGGAAT
____________________________________________________________
consensus AGCGTTCCCGAAGGTGCGAGAACCTGAAAGCGTTCCGATGCTGTGCACGAAGCCGGGAAT
. : . : . : . : . : . :
JMFS108C09+ TGTGCTCAGTTTTAGTACACTTGGCACTTATCTATTGGGCATCGGGTGCGACAAAATTGT
____________________________________________________________
consensus TGTGCTCAGTTTTAGTACACTTGGCACTTATCTATTGGGCATCGGGTGCGACAAAATTGT