Contig 013153:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS038F01Sequence597013153 (5)ref|XP_009767447.1|114PREDICTED: uncharacterized protein LOC104218607 [Nicotiana sylvestris]
JMFS061B03Sequence627013153 (5)ref|XP_009767447.1|120PREDICTED: uncharacterized protein LOC104218607 [Nicotiana sylvestris]
JMFS107A12Sequence627013153 (5)ref|XP_009767447.1|119PREDICTED: uncharacterized protein LOC104218607 [Nicotiana sylvestris]
JMFS117G06Sequence638013153 (5)ref|XP_009767447.1|132PREDICTED: uncharacterized protein LOC104218607 [Nicotiana sylvestris]
JMFS156F08Sequence614013153 (5)ref|XP_009767447.1|118PREDICTED: uncharacterized protein LOC104218607 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS117G06+                                          CGTCAATTGGGCTGCTCAACTGATCCGAC
                      ____________________________________________________________
consensus                                            CGTCAATTGGGCTGCTCAACTGATCCGAC
 
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JMFS117G06+           GAGACCGATCTGGCAAAAAACTCCCCTCCGTCGCCGGAACTGCTGCACTCGGCGGCCGAG
JMFS061B03+                                            CCGGAACTGCTGCACTCGGCGGCCGAG
JMFS156F08+                                                       GCACTCGGCGGCCGAG
JMFS107A12+                                            CCGGAACTGCTGCACTCGGCGGCCGAG
                      ____________________________________________________________
consensus             GAGACCGATCTGGCAAAAAACTCCCCTCCGTCGCCGGAACTGCTGCACTCGGCGGCCGAG
 
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JMFS117G06+           AGCGACGGCCTGTGGCGGAGAATAGAAGGGTCACGGCTGAGACCCATTTTCTGGAGAAGG
JMFS061B03+           AGCGACGGCCTGTGGCGGAGAATAGAAGGGTCACGGCTGAGACCCATTTTCTGGAGAAGG
JMFS156F08+           AGCGACGGCCTGTGGCGGAGAATAGAAGGGTCACGGCTGAGACCCATTTTCTGGAGAAGG
JMFS038F01+            GCGACGGCCTGTGGCGGAGAATAGAAGGGTCACGGCTGAGACCCATTTTCTGGAGAAGG
JMFS107A12+           AGCGACGGCCTGTGGCGGAGAATAGAAGGGTCACGGCTGAGACCCATTTTCTGGAGAAGG
                      ____________________________________________________________
consensus             AGCGACGGCCTGTGGCGGAGAATAGAAGGGTCACGGCTGAGACCCATTTTCTGGAGAAGG
 
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JMFS117G06+           CTGAGGCGGCGTTCTTCGATAGAGGAGGGCTGGGAGATCCAGACGTCATAGTTGCCAGAA
JMFS061B03+           CTGAGGCGGCGTTCTTCGATAGAGGAGGGCTGGGAGATCCAGACGTCATAGTTGCCAGAA
JMFS156F08+           CTGAGGCGGCGTTCTTCGATAGAGGAGGGCTGGGAGATCCAGACGTCATAGTTGCCAGAA
JMFS038F01+           CTGAGGCGGCGTTCTTCGATAGAGGAGGGCTGGGAGATCCAGACGTCATAGTTGCCAGAA
JMFS107A12+           CTGAGGCGGCGTTCTTCGATAGAGGAGGGCTGGGAGATCCAGACGTCATAGTTGCCAGAA
                      ____________________________________________________________
consensus             CTGAGGCGGCGTTCTTCGATAGAGGAGGGCTGGGAGATCCAGACGTCATAGTTGCCAGAA
 
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JMFS117G06+           ACACCCATGGGGAAGCAAGGCACAGAAGGCGGTTGGGGGCAAGCATAATTGGGGGGAGAA
JMFS061B03+           ACACCCATGGGGAAGCAAGGCACAGAAGGCGGTTGGGGGCAAGCATAATTGGGGGGAGAA
JMFS156F08+           ACACCCATGGGGAAGCAAGGCACAGAAGGCGGTTGGGGGCAAGCATAATTGGGGGGAGAA
JMFS038F01+           ACACCCATGGGGAAGCAAGGCACAGAAGGCGGTTGGGGGCAAGCATAATTGGGGGGAGAA
JMFS107A12+           ACACCCATGGGGAAGCAAGGCACAGAAGGCGGTTGGGGGCAAGCATAATTGGGGGGAGAA
                      ____________________________________________________________
consensus             ACACCCATGGGGAAGCAAGGCACAGAAGGCGGTTGGGGGCAAGCATAATTGGGGGGAGAA
 
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JMFS117G06+           CCCAAAATACGTTCTTCTTCCTCCTCCTCCTCCTCGTCGGACGGCAATGCCGAGGAGGAG
JMFS061B03+           CCCAAAATACGTTCTTCTTCCTCCTCCTCCTCCTCGTCGGACGGCAATGCCGAGGAGGAG
JMFS156F08+           CCCAATATACGTTCTTCTTCCTCCTCCTCCTCCTCGTCGGACGGCAATGCCGAGGAGGAG
JMFS038F01+           CCCAAAATACGTTCTTCTTCCTCCTCCTCCTCCTCGTCGGACGGCAATGCCGAGGAGGAG
JMFS107A12+           CCCAAAATACGTTCTTCTTCCTCCTCCTCCTCCTCGTCGGAGGGCAATGCCGAGGAGGAG
                      ____________________________________________________________
consensus             CCCAAAATACGTTCTTCTTCCTCCTCCTCCTCCTCGTCGGACGGCAATGCCGAGGAGGAG
 
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JMFS117G06+           CAGGAAGTATTGGCGGAAGAGATGAGGCGGTCAAAGGAATCGTGAAAACACTCGTCTTCC
JMFS061B03+           CAGGAAGTATTGGCGGAAGAGATGAGGCGGTCAAAGGAATCGTGAAAACACTCGTCTTCC
JMFS156F08+           CAGGAAGTATTGGCGGAAGAGATGAGGCGGTCAAAGGAATCGTGAAAACACTCGTCTTCC
JMFS038F01+           CAGGAAGTATTGGCGGAAGAGATGAGGCGGTCAAAGGAATCGTGAAAACACTCGTCTTCC
JMFS107A12+           CAGGAAGTATTGGCGGAAGAGATGAGGCGGTCAAAGGAATCGTGAAAACACTCGTCTTCC
                      ____________________________________________________________
consensus             CAGGAAGTATTGGCGGAAGAGATGAGGCGGTCAAAGGAATCGTGAAAACACTCGTCTTCC
 
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JMFS117G06+           TCTTCCTCGTCGCCGGCCTTTTTCATCTTCGCAATCGTTCTTCCCCTCCTCGGAGCCGAG
JMFS061B03+           TCTTCCTCGTCGCCGGCCTTTTTCATCTTCGCAATCGTTCTTCCCCTCCTCGGAGCCGAG
JMFS156F08+           TCTTCCTCGTCGCCGGCCTTTTTCATCTTCGCAATCGTTCTTCCCCTCCTCGGAGCCGAG
JMFS038F01+           TCTTCCTCGTCGCCGGCCTTTTTCATCTTCGCAATCGTTCTTCCCCTCCTCGGAGCCGAG
JMFS107A12+           TCTTCCTCGTCGCCGGCCTTTTTCATCTTCGCAATCGTTCTTCCCCTCCTCGGAGCCGAG
                      ____________________________________________________________
consensus             TCTTCCTCGTCGCCGGCCTTTTTCATCTTCGCAATCGTTCTTCCCCTCCTCGGAGCCGAG
 
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JMFS117G06+           GCATTTCCATGAAAATGCCCGGTTGAGCACCGGCACCGATCCGAGCACCGCCGGATCCTA
JMFS061B03+           GCATTTCCATGAAAATGCCCGGTTGAGCACCGGCACCGATCCGAGCACCGCCGGATCCTA
JMFS156F08+           GCATTTCCATGAAAATGCCCGGTTGAGCACCGGCACCGATCCGAGCACCGCCGGATCCTA
JMFS038F01+           GCATTTCCATGAAAATGCCCGGTTGAGCACCGGCACCGATCCGAGCACCGCCGGATCCTA
JMFS107A12+           GCATTTCCATGAAAATGCCCGGTTGAGCACCGGCACCGATCCGAGCACCGCCGGATCCTA
                      ____________________________________________________________
consensus             GCATTTCCATGAAAATGCCCGGTTGAGCACCGGCACCGATCCGAGCACCGCCGGATCCTA
 
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JMFS117G06+           CTCCCGCTGCAGTCCCACTGCCGCCGTTCTTTATATATAATATATATAGCGTACGTGGGG
JMFS061B03+           CTCCCGCTGCAGTCCCACTGCCGCCGTTCTTTATATATAATATATATAGCGTACGTGGGG
JMFS156F08+           CTCCCGCTGCAGTCCCACTGCCGCCGTTCTTTATATATAATATATATAGCGTACGTGGGG
JMFS038F01+           CTCCCGCTGCAGTCCCACTGCCGCCGTTCTTTATATATAATATATATAGCGTACGTGGGG
JMFS107A12+           CTCCCGCTGCAGTCCCACTGCCGCCGTTCTTTATATATAATATATATAGCGTACGTGGGG
                      ____________________________________________________________
consensus             CTCCCGCTGCAGTCCCACTGCCGCCGTTCTTTATATATAATATATATAGCGTACGTGGGG
 
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JMFS117G06+           TGTATTGACTGGTGTCAATGGTGTGGGAAAACGGGAAAAGATCGGACAATATGGAAGAGG
JMFS061B03+           TGTATTGACTGGTGTCAATGGTGTGGGAAAACGGGAAAAGATCGGACAATATGGAAGAGG
JMFS156F08+           TGTATTGACTGGTGTCAATGGTGTGGGAAAACGGGAAAAGATCGGACAATATGGAAGAGG
JMFS038F01+           TGTATTGACTGGTGTCAATGGTGTGGGAAAACGGGAAAAGATCGGACAATATGGAAGAGG
JMFS107A12+           TGTATTGACTGGTGTCAATGGTGTGGGAAAACGGGAAAAGATCGGACAATATGGAAGAGG
                      ____________________________________________________________
consensus             TGTATTGACTGGTGTCAATGGTGTGGGAAAACGGGAAAAGATCGGACAATATGGAAGAGG
 
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JMFS117G06+           GGTTTTAAG                                                   
JMFS061B03+           GGTTTTAAGCGTTGGGAAATCAGATCCGATAGAGAGAGAGAGAAAGAAAGAGAGTTT   
JMFS156F08+           GGTTTTAAGCGTTGGGAAATCAGATCCGATAGAGAGAGAGAGAAAGAAAGAGAGTTT   
JMFS038F01+           GGTTTTAAGCGTTGGGAAATCAGATCCGATAGAGAGAGAGAGAAAGAAAGAGAGTTT   
JMFS107A12+           GGTTTTAAGCGTTGGGAAATCAGATCCGATAGAGAGAGAGAGAAAGAAAGAGAGTTTTGC
                      ____________________________________________________________
consensus             GGTTTTAAGCGTTGGGAAATCAGATCCGATAGAGAGAGAGAGAAAGAAAGAGAGTTTTGC