Contig 013146:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024J22Sequence512012883 (2)gb|AHB84678.1|9e-37pectin methylesterase [Citrus reticulata]754013146 (2)dbj|BAF95866.1|2e-56pectin methylesterase isoform alpha [Vitis hybrid cultivar]
JMFS098D07Sequence500013146 (2)ref|XP_006841486.1|2e-18hypothetical protein AMTR_s00003p00120050 [Amborella trichopoda] gb|ERN03161.1|

Alignment

This contig is upended


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rJMFF024J22-                           TTTGTAATTAGTAATATATTTTTTAATATAAGTATTACATTTA
                      ____________________________________________________________
consensus                              TTTGTAATTAGTAATATATTTTTTAATATAAGTATTACATTTA
 
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rJMFF024J22-          TATATTGACTTGATCCGACTTGAATTGTCACACGAATAAAGATTTGTGTGACGGTCTCAC
                      ____________________________________________________________
consensus             TATATTGACTTGATCCGACTTGAATTGTCACACGAATAAAGATTTGTGTGACGGTCTCAC
 
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rJMFF024J22-          AAAAGTATTAACATATAATTTATTGGGGTGCTATGCAAATGGTAGAAAACCAACAAACTT
                      ____________________________________________________________
consensus             AAAAGTATTAACATATAATTTATTGGGGTGCTATGCAAATGGTAGAAAACCAACAAACTT
 
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rJMFF024J22-          CAATTGAAGTTGCACGGAGAAGACTTGGACGACTTTGCTTCTCATTTTCCAAATCAACCG
                      ____________________________________________________________
consensus             CAATTGAAGTTGCACGGAGAAGACTTGGACGACTTTGCTTCTCATTTTCCAAATCAACCG
 
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rJMFF024J22-          ACAGGGACGACCTTAAATTTGAGTCGGAAAAAAGTTACTTGGAAAACTGGATATCGCGTT
                      ____________________________________________________________
consensus             ACAGGGACGACCTTAAATTTGAGTCGGAAAAAAGTTACTTGGAAAACTGGATATCGCGTT
 
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rJMFF024J22-          AAAGACCCGGTGTCCTCGTTCCGCTTCTTCCCAGTCATCGCTGAGAATTTTTCTTCTTTG
                      ____________________________________________________________
consensus             AAAGACCCGGTGTCCTCGTTCCGCTTCTTCCCAGTCATCGCTGAGAATTTTTCTTCTTTG
 
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rJMFF024J22-          TTTTTTTTAAACCGGGATAGTATGGGATTTTAGGGTCGGTTACGGGCAGCCAATCTCCGC
JMFS098D07+                 TTAAACCGGGATAGTATGGGATTTTAGGGTCGGTTACGGGCAGCCAATCTCCGC
                      ____________________________________________________________
consensus             TTTTTTTTAAACCGGGATAGTATGGGATTTTAGGGTCGGTTACGGGCAGCCAATCTCCGC
 
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rJMFF024J22-          CGTCGATGAGATTGGCGGCAGTGAAATATTTGGCCACTTTGGCGCGCTTGATGATTCTAT
JMFS098D07+           CGTCGATGAGATTGGCGGCAGTGAAATATTTGGCCACTTTGGCGCGCTTGATGATTCTAT
                      ____________________________________________________________
consensus             CGTCGATGAGATTGGCGGCAGTGAAATATTTGGCCACTTTGGCGCGCTTGATGATTCTAT
 
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rJMFF024J22-          ACCCCGCCCATGTCACTCTGTTAGACGTATCGGCGCCGGGCCCTTTGTTCTTGTACTCCC
JMFS098D07+           ACCCCGCCCATGTCACTCTGTTAGACGTATCGGCGCCGGGCCCTTTGTTCTTGTACTCCC
                      ____________________________________________________________
consensus             ACCCCGCCCATGTCACTCTGTTAGACGTATCGGCGCCGGGCCCTTTGTTCTTGTACTCCC
 
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rJMFF024J22-          CGTAGTAGAGAGTTTTGAGAGCAAAGTCG                               
JMFS098D07+           CGTAGTAGAGAGTTTTGAGAGCAAAGTCGTCCAAGTCTTCTCCGTGCAACTTTAATTGAA
                      ____________________________________________________________
consensus             CGTAGTAGAGAGTTTTGAGAGCAAAGTCGTCCAAGTCTTCTCCGTGCAACTTTAATTGAA
 
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JMFS098D07+           GTTTGTTGGTTTTCTACCATTTGCATAGCACCCCAATAAATTATATGTTAATACTTTTGT
                      ____________________________________________________________
consensus             GTTTGTTGGTTTTCTACCATTTGCATAGCACCCCAATAAATTATATGTTAATACTTTTGT
 
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JMFS098D07+           GAGACCGTCACACAAATCTTTATTCGTGTGACAATTCAAGTCGGATCAAGTCAATATATA
                      ____________________________________________________________
consensus             GAGACCGTCACACAAATCTTTATTCGTGTGACAATTCAAGTCGGATCAAGTCAATATATA
 
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JMFS098D07+           AATGTAATACTTATATTAAAAAATATATTACTAATTACAAATAAAGTTGTTGTTACTTAT
                      ____________________________________________________________
consensus             AATGTAATACTTATATTAAAAAATATATTACTAATTACAAATAAAGTTGTTGTTACTTAT