Contig 013143:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008I19Sequence577013143 (3)emb|CDP01416.1|2e-65unnamed protein product [Coffea canephora]724019065ref|XP_006366523.1|5e-108PREDICTED: trafficking protein particle complex subunit 12-like [Solanum tubero
JMFS093G11Sequence627013143 (3)emb|CDP01416.1|2e-69unnamed protein product [Coffea canephora]
JMSF015I09Sequence561013143 (3)emb|CDP01416.1|2e-69unnamed protein product [Coffea canephora]780024513

Alignment

This contig is upended


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JMSF015I09+                                                       CTTGGAACGAATGAAA
JMFS093G11+                                            TTGTTCAGTTTCTTGGAACGAATGAAA
                      ____________________________________________________________
consensus                                              TTGTTCAGTTTCTTGGAACGAATGAAA
 
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JMFF008I19+             GAGGAGGGAGTACAGGCGATCGAGAGCTTGCTGGCGCTGACCCAGGGTGGAGGGGAGA
JMSF015I09+           TCGAGGAGGGAGTACAGGCGATCGAGAGCTTGCTGGCGCTGACCCAGGGTGGAGGGGAGA
JMFS093G11+           TCGAGGAGGGAGTACAGGCGATCGAGAGCTTGCTGGCGCTGACCCAGGGTGGAGGGGAGA
                      ____________________________________________________________
consensus             TCGAGGAGGGAGTACAGGCGATCGAGAGCTTGCTGGCGCTGACCCAGGGTGGAGGGGAGA
 
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JMFF008I19+           TGAGCGTGGAGCCAACGGAGGGCGAAGGGGACCATGGAGCCCTTGGAGTTGGGGTAATGA
JMSF015I09+           TGAGCGTGGAGCCAACGGAGGGCGAAGGGGACCATGGAGCCCTTGGAGTTGGGGTAATGA
JMFS093G11+           TGAGCGTGGAGCCAACGGAGGGCGAAGGGGACCATGGAGCCCTTGGAGTTGGGGTAATGA
                      ____________________________________________________________
consensus             TGAGCGTGGAGCCAACGGAGGGCGAAGGGGACCATGGAGCCCTTGGAGTTGGGGTAATGA
 
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JMFF008I19+           TTAGGGTAAGTTTCGTATACGTATTGGGAGCTCTCGAATTCGTCGCCTTCAAGCACGGTG
JMSF015I09+           TTAGGGTAAGTTTCGTATACGTATTGGGAGCTCTCGAATTCGTCGCCTTCAAGCACGGTG
JMFS093G11+           TTAGGGTAAGTTTCGTATACGTATTGGGAGCTCTCGAATTCGTCGCCTTCAAGCACGGTG
                      ____________________________________________________________
consensus             TTAGGGTAAGTTTCGTATACGTATTGGGAGCTCTCGAATTCGTCGCCTTCAAGCACGGTG
 
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JMFF008I19+           TTGAGCTCGTTGCCGGCGTCGGAGAAGCGGCGGAGCTTAGTGAGAGCAAGGACATTGTAA
JMSF015I09+           TTGAGCTCGTTGCCGGCGTCGGAGAAGCGGCGGAGCTTAGTGAGAGCAAGGACATTGTAA
JMFS093G11+           TTGAGCTCGTTGCCGGCGTCGGAGAAGCGGCGGAGCTTAGTGAGAGCAAGGACATTGTAA
                      ____________________________________________________________
consensus             TTGAGCTCGTTGCCGGCGTCGGAGAAGCGGCGGAGCTTAGTGAGAGCAAGGACATTGTAA
 
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JMFF008I19+           GTGAGGTAGATGAGGTGCTCATGGGGCTTTGTGAGGAGGGAAAGCGAGCGAGCGCGGCCA
JMSF015I09+           GTGAGGTAGATGAGGTGCTCATGGGGCTTTGTGAGGAGGGAAAGCGAGCGAGCGCGGCCA
JMFS093G11+           GTGAGGTAGATGAGGTGCTCATGGGGCTTTGTGAGGAGGGAAAGCGAGCGAGCGCGGCCA
                      ____________________________________________________________
consensus             GTGAGGTAGATGAGGTGCTCATGGGGCTTTGTGAGGAGGGAAAGCGAGCGAGCGCGGCCA
 
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JMFF008I19+           ATCTTGTCAAGGATCGACCGCCACGCTCCTCGGCAAGCCAGATCCTGCAGGGCGCCTAGT
JMSF015I09+           ATCTTGTCAAGGATCGACCGCCACGCTCCTCGGCAAGCCAGATCCTGCAGGGCGCCTAGT
JMFS093G11+           ATCTTGTCAAGGATCGACCGCCACGCTCCTCGGCAAGCCAGATCCTGCAGGGCGCCTAGT
                      ____________________________________________________________
consensus             ATCTTGTCAAGGATCGACCGCCACGCTCCTCGGCAAGCCAGATCCTGCAGGGCGCCTAGT
 
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JMFF008I19+           TCGTGGCAGTGATCGTTCAGCGAGCCGTATGGATTGTTTAAGGGATCATCAATGGCAGTG
JMSF015I09+           TCGTGGCAGTGATCGTTCAGCGAGCCGTATGGATTGTTTAAGGGATCATCAATGGCAGTG
JMFS093G11+           TCGTGGCAGTGATCGTTCAGCGAGCCGTATGGATTGTTTAAGGGATCATCAATGGCAGTG
                      ____________________________________________________________
consensus             TCGTGGCAGTGATCGTTCAGCGAGCCGTATGGATTGTTTAAGGGATCATCAATGGCAGTG
 
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JMFF008I19+           GCGGCGCCGGAGTCTGCGTCAGCAGTGGCGGTGGGAGCTGTGTTGAATGGAGGTTGATCT
JMSF015I09+           GCGGCGCCGGAGTCTGCGTCAGCAGTGGCGGTGGGAGCTGTGTTGAATGGAGGTTGATCT
JMFS093G11+           GCGGCGCCGGAGTCTGCGTCAGCAGTGGCGGTGGGAGCTGTGTTGAATGGAGGTTGATCT
                      ____________________________________________________________
consensus             GCGGCGCCGGAGTCTGCGTCAGCAGTGGCGGTGGGAGCTGTGTTGAATGGAGGTTGATCT
 
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JMFF008I19+           GAATCTGGATCTGCGGTCACCGTAGCGTCCATGGCGGATGCCGGAGATTGAAAAGTGCTA
JMSF015I09+           GAATCTGGATCTGCGGTCACCGTAGCGTCCATGGCGGATGCCGGAGATTGAAAAGTGCTA
JMFS093G11+           GAATCTGGATCTGCGGTCACCGTAGCGTCCATGGCGGATGCCGGAGATTGAAAAGTGCTA
                      ____________________________________________________________
consensus             GAATCTGGATCTGCGGTCACCGTAGCGTCCATGGCGGATGCCGGAGATTGAAAAGTGCTA
 
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JMFF008I19+           ACGTGAGCCGAGCTTTGGTATTGGTCTTTGGTTTTTAAT                     
JMFS093G11+           ACGTGAGCCGAGCTTTGGTATTGGTCTTTGGTTTTTAATGTGGAGAGGAATAAAATTTTC
                      ____________________________________________________________
consensus             ACGTGAGCCGAGCTTTGGTATTGGTCTTTGGTTTTTAATGTGGAGAGGAATAAAATTTTC