clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF008M18 | Sequence | 531 | 013133 (7) | ref|XP_010680658.1| | 7e-45 | PREDICTED: trihelix transcription factor GT-2-like [Beta vulgaris subsp. vulgar | |||||
JMFS022G01 | Sequence | 539 | 013133 (7) | ref|XP_009618661.1| | 7e-53 | PREDICTED: trihelix transcription factor GTL1-like [Nicotiana tomentosiformis] | |||||
JMFS023C01 | Sequence | 341 | 013133 (7) | ref|XP_003536427.1| | 5e-41 | PREDICTED: trihelix transcription factor GT-2-like [Glycine max] | |||||
JMFS037B10 | Sequence | 493 | 013133 (7) | ref|XP_009618661.1| | 2e-51 | PREDICTED: trihelix transcription factor GTL1-like [Nicotiana tomentosiformis] | |||||
JMFS080E03 | Sequence | 608 | 013133 (7) | ref|XP_009618661.1| | 2e-57 | PREDICTED: trihelix transcription factor GTL1-like [Nicotiana tomentosiformis] | |||||
JMFS081C08 | Sequence | 558 | 013133 (7) | ref|XP_009618661.1| | 5e-56 | PREDICTED: trihelix transcription factor GTL1-like [Nicotiana tomentosiformis] | |||||
JMFS128C10 | Sequence | 305 | 013133 (7) |
This contig is upended
. : . : . : . : . : . :
JMFS081C08+ AGGAGTGT
JMFS080E03+ AGGAGTGT
____________________________________________________________
consensus AGGAGTGT
. : . : . : . : . : . :
JMFS081C08+ GTTCGAAAGCCTCGAGCTGATCGAAAAACCGATAAGTTTTGCCGTCGGCCTTGGAGGCGC
JMFS037B10+ GATCGAAAAACCGATAAGTTTTGCCGTCGGCCTTGGAGGCGC
JMFS022G01+ GATCGAAAAACCGATAAGTTTTGCCGTCGGCCTTGGAGGCGC
JMFF008M18+ GC
JMFS080E03+ GTTCGAAAGCCTCGAGCTGATCGAAAAACCGATAAGTTTTGCCGTCGGCCTTGGAGGCGC
____________________________________________________________
consensus GTTCGAAAGCCTCGAGCTGATCGAAAAACCGATAAGTTTTGCCGTCGGCCTTGGAGGCGC
. : . : . : . : . : . :
JMFS081C08+ GTCCATCCTTTGTCCGCTTATGATACTTGTAAACGTTCTCGAATTTCTCCTTGCATTTCT
JMFS023C01+ TCCGCTTATGATACTTGTAAACGTTCTCGAATTTCTCCTTGCATTTCT
JMFS037B10+ GTCCATCCTTTGTCCGCTTATGATACTTGTAAACGTTCTCGAATTTCTCCTTGCATTTCT
JMFS022G01+ GTCCATCCTTTGTCCGCTTATGATACTTGTAAACGTTCTCGAATTTCTCCTTGCATTTCT
JMFF008M18+ GTCCATCCTTTGTCCGCTTATGATACTTGTAAACGTTCTCGAATTTCTCCTTGCATTTCT
JMFS080E03+ GTCCATCCTTTGTCCGCTTATGATACTTGTAAACGTTCTCGAATTTCTCCTTGCATTTCT
____________________________________________________________
consensus GTCCATCCTTTGTCCGCTTATGATACTTGTAAACGTTCTCGAATTTCTCCTTGCATTTCT
. : . : . : . : . : . :
JMFS081C08+ TGGAGCTTCGATGGTATCCCAGCTCCGCCATTTTCCTGGAAACTTCCTCCCACAGCGGGC
JMFS023C01+ TGGAGCTTCGATGGTATCCCAGCTCCGCCATTTTCCTGGAAACTTCCTCCCACAGCGGGC
JMFS037B10+ TGGAGCTTCGATGGTATCCCAGCTCCGCCATTTTCCTGGAAACTTCCTCCCACAGCGGGC
JMFS022G01+ TGGAGCTTCGATGGTATCCCAGCTCCGCCATTTTCCTGGAAACTTCCTCCCACAGCGGGC
JMFF008M18+ TGGAGCTTCGATGGTATCCCAGCTCCGCCATTTTCCTGGAAACTTCCTCCCACAGCGGGC
JMFS080E03+ TGGAGCTTCGATGGTATCCCAGCTCCGCCATTTTCCTGGAAACTTCCTCCCACAGCGGGC
____________________________________________________________
consensus TGGAGCTTCGATGGTATCCCAGCTCCGCCATTTTCCTGGAAACTTCCTCCCACAGCGGGC
. : . : . : . : . : . :
JMFS081C08+ CTTTCAGGCTTGAGTCTCTGAAAACAACATCCATATCCGACCTAATTTTCAATAGAGCCA
JMFS023C01+ CTTTCAGGCTTGAGTCTCTGAAAACAACATCCATATCCGACCTAATTTTCAATAGAGCCA
JMFS037B10+ CTTTCAGGCTTGAGTCTCTGAAAACAACATCCATATCCGACCTAATTTTCAATAGAGCCA
JMFS022G01+ CTTTCAGGCTTGAGTCTCTGAAAACAACATCCATATCCGACCTAATTTTCAATAGAGCCA
JMFF008M18+ CTTTCAGGCTTGAGTCTCTGAAAACAACATCCATATCCGACCTAATTTTCAATAGAGCCA
JMFS080E03+ CTTTCAGGCTTGAGTCTCTGAAAACAACATCCATATCCGACCTAATTTTCAATAGAGCCA
____________________________________________________________
consensus CTTTCAGGCTTGAGTCTCTGAAAACAACATCCATATCCGACCTAATTTTCAATAGAGCCA
. : . : . : . : . : . :
JMFS081C08+ AAGTCTCCTGCCTGGGCCACCTATTTCCGCCGGAATTCCTCTCCGCTTCCTCCAGCCTTC
JMFS023C01+ AAGTCTCCTGCCTGGGCCACCTATTTCCGCCGGAATTCCTCTCCGCTTCCTCCAGCCTTC
JMFS037B10+ AAGTCTCCTGCCTGGGCCACCTATTTCCGCCGGAATTCCTCTCCGCTTCCTCCAGCCTTC
JMFS022G01+ AAGTCTCCTGCCTGGGCCACCTATTTCCGCCGGAATTCCTCTCCGCTTCCTCCAGCCTTC
JMFS128C10+ TCCTGCATGGGCCGCCTATTTCCGCCGGAATTCCTCTCCGCTTCCTCCAGCCTTC
JMFF008M18+ AAGTCTCCTGCCTGGGCCACCTATTTCCGCCGGAATTCCTCTCCGCTTCCTCCAGCCTTC
JMFS080E03+ AAGTCTCCTGCCTGGGCCACCTATTTCCGCCGGAATTCCTCTCCGCTTCCTCCAGCCTTC
____________________________________________________________
consensus AAGTCTCCTGCCTGGGCCACCTATTTCCGCCGGAATTCCTCTCCGCTTCCTCCAGCCTTC
. : . : . : . : . : . :
JMFS081C08+ CCGCCTTGTCTTCCTCCCCGTAGCCACCCGTCAGCGCTCCCGCGGCGGCGCCACCCACGT
JMFS023C01+ CCGCCTTGTCTTCCTCCCCGTAGCCACCCGTCAGCGCTCCCGCGGCGGCGCCACCCACGT
JMFS037B10+ CCGCCTTGTCTTCCTCCCCGTAGCCACCCGTCAGCGCTCCCGCGGCGGCGCCACCCACGT
JMFS022G01+ CCGCCTTGTCTTCCTCCCCGTAGCCACCCGTCAGCGCTCCCGCGGCGGCGCCACCCACGT
JMFS128C10+ CCGCCGTGTCTTCCTCCCCGTAGCCACCCGTCAGCGCTCCCGCGGCGGCGCCACCCACGT
JMFF008M18+ CCGCCTTGTCTTCCTCCCCGTAGCCACCCGTCAGCGCTCCCGCGGCGGCGCCACCCACGT
JMFS080E03+ CCGCCTTGTCTTCCTCCCCGTAGCCACCCGTCAGCGCTCCCGCGGCGGCGCCACCCACGT
____________________________________________________________
consensus CCGCCTTGTCTTCCTCCCCGTAGCCACCCGTCAGCGCTCCCGCGGCGGCGCCACCCACGT
. : . : . : . : . : . :
JMFS081C08+ CGCTGCTGTTCCCACCACCACCTGCAGCACTACCAGCTCCGCCACTCTCCGGAGCTTCGG
JMFS023C01+ CGCTGCTGTTCCCACCACCACCTGCAGCACTACCAGCTCCGCCACTCTCCGGA
JMFS037B10+ CGCTGCTGTTCCCACCACCACCTGCAGCACTACCAGCTCCGCCACTCTCCGGAGCTTCGG
JMFS022G01+ CGCTGCTGTTCCCACCACCACCTGCAGCACTACCAGCTCCGCCACTCTCCGGAGCTTCGG
JMFS128C10+ CGCTGCTGTTCCCACCACCACCTGCAGCACTACCAGCTCCGCCACTCTCCGGAGCTTCGG
JMFF008M18+ CGCTGCTGTTCCCACCACCACCTGCAGCACTACCAGCTCCGCCACTCTCCGGAGCTTCGG
JMFS080E03+ CGCTGCTGTTCCCACCACCACCTGCAGCACTACCAGCTCCGCCACTCTCCGGAGCTTCGG
____________________________________________________________
consensus CGCTGCTGTTCCCACCACCACCTGCAGCACTACCAGCTCCGCCACTCTCCGGAGCTTCGG
. : . : . : . : . : . :
JMFS081C08+ GTGGCGCTGCCCCATCGGCGGCGGCGCTTATCAGGCCGGACACTCCCAGCATCTCTGATA
JMFS037B10+ GTGGCGCTGCCCCATCGGCGGCGGCGCTTATCAGGCCGGACACTCCCAGCATCTCTGATA
JMFS022G01+ GTGGCGCTGCCCCATCGGCGGCGGCGCTTATCAGGCCGGACACTCCCAGCATCTCTGATA
JMFS128C10+ GTGGCGCTGCCCCATCGGCGGCGGCGCTTATCAGGCCGGACACTCCCAGCATCTCTGATA
JMFF008M18+ GTGGCGCTGCCCCATCGGCGGCGGCGCTTATCAGGCCGGACACTCCCAGCATCTCTGATA
JMFS080E03+ GTGGCGCTGCCCCATCGGCGGCGGCGCTTATCAGGCCGGACACTCCCAGCATCTCTGATA
____________________________________________________________
consensus GTGGCGCTGCCCCATCGGCGGCGGCGCTTATCAGGCCGGACACTCCCAGCATCTCTGATA
. : . : . : . : . : . :
JMFS081C08+ CGATACGATACGATGCCAAACAATCCTCAACGTACACCAGCAAGTAGATGAAGAAGAAGA
JMFS037B10+ CGATACGATACGATGCCAAACAATCCTCAAC
JMFS022G01+ CGATACGATACGATGCCAAACAATCCTCAACGTACACCAGCAAGTAGATGAAGAAGAAGA
JMFS128C10+ CGATACGATACGATGCCAAACAATCCTCAACGTACACCAGCAAGTAGATGAAGAAGAAGA
JMFF008M18+ CGATACGATACGATGCCAAACAATCCTCAACGTACACCAGCAAGTAGATGAAGAAGAAGA
JMFS080E03+ CGATACGATACGATGCCAAACAATCCTCAACGTACACCAGCAAGTAGATGAAGAAGAAGA
____________________________________________________________
consensus CGATACGATACGATGCCAAACAATCCTCAACGTACACCAGCAAGTAGATGAAGAAGAAGA
. : . : . : . : . : . :
JMFS081C08+ AGAAAGAGGA
JMFS022G01+ AGAAAGAGGA
JMFS128C10+ AGAAAGAGGA
JMFF008M18+ AGAAAGAGGAGGCTCCCCCCAGACTGAAAAAAACCAAAATAAAAAAGAT
JMFS080E03+ AGAAAGAGGAGGCTCCCCCCAGACTGAAAAAAACCAAAATAAAAAAGATGGTGAATTCTG
____________________________________________________________
consensus AGAAAGAGGAGGCTCCCCCCAGACTGAAAAAAACCAAAATAAAAAAGATGGTGAATTCTG