| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF018G17 | Sequence | 555 | 013132 (11) | emb|CDP07106.1| | 8e-34 | unnamed protein product [Coffea canephora] | 787 | 011039 (2) | ref|XP_009613056.1| | 2e-61 | PREDICTED: serine/threonine-protein phosphatase 6 regulatory subunit 3-like iso |
| JMFS013E11 | Sequence | 618 | 013132 (11) | emb|CDP07106.1| | 3e-124 | unnamed protein product [Coffea canephora] | |||||
| JMFS057H04 | Sequence | 627 | 013132 (11) | gb|KJB26208.1| | 1e-62 | hypothetical protein B456_004G229800 [Gossypium raimondii] | |||||
| JMFS065E08 | Sequence | 592 | 013132 (11) | emb|CDP07106.1| | 1e-23 | unnamed protein product [Coffea canephora] | |||||
| JMFS076H03 | Sequence | 615 | 013132 (11) | gb|KJB26207.1| | 9e-42 | hypothetical protein B456_004G229800 [Gossypium raimondii] | |||||
| JMFS077B02 | Sequence | 638 | 013132 (11) | gb|KJB26207.1| | 9e-69 | hypothetical protein B456_004G229800 [Gossypium raimondii] | |||||
| JMFS091D04 | Sequence | 618 | 013132 (11) | gb|KJB26207.1| | 5e-52 | hypothetical protein B456_004G229800 [Gossypium raimondii] | |||||
| JMFS108A02 | Sequence | 628 | 013132 (11) | ref|XP_009776728.1| | 4e-60 | PREDICTED: serine/threonine-protein phosphatase 6 regulatory subunit 3-like iso | |||||
| JMFS112B06 | Sequence | 627 | 013132 (11) | gb|KJB26208.1| | 3e-53 | hypothetical protein B456_004G229800 [Gossypium raimondii] | |||||
| JMFS112B07 | Sequence | 627 | 013132 (11) | gb|KJB26207.1| | 2e-52 | hypothetical protein B456_004G229800 [Gossypium raimondii] | |||||
| JMSF020G08 | Sequence | 679 | 013132 (11) | gb|KJB26206.1| | 4e-60 | hypothetical protein B456_004G229800 [Gossypium raimondii] | 801 | 011039 (2) | ref|XP_009776730.1| | 1e-58 | PREDICTED: serine/threonine-protein phosphatase 6 regulatory subunit 3-like iso |
This contig is upended
. : . : . : . : . : . :
JMFS013E11+ CATGACCAAATACTCTAGAAATAAAACTTGGGCTAGATAACTTAGT
____________________________________________________________
consensus CATGACCAAATACTCTAGAAATAAAACTTGGGCTAGATAACTTAGT
. : . : . : . : . : . :
JMFS013E11+ AGCAAGAGGGGATGGTGAATTTCTGGTAATTGAGCAGAGTGTTTCAGCAGCATTAGCATG
____________________________________________________________
consensus AGCAAGAGGGGATGGTGAATTTCTGGTAATTGAGCAGAGTGTTTCAGCAGCATTAGCATG
. : . : . : . : . : . :
JMFS013E11+ CACTTCGGGAGGACTAGAAGGGCTTAATTTATCAACAATCATTTCCAATAAATTACTATC
____________________________________________________________
consensus CACTTCGGGAGGACTAGAAGGGCTTAATTTATCAACAATCATTTCCAATAAATTACTATC
. : . : . : . : . : . :
JMFS013E11+ AGCCAACCATTGCATGACATCTAAGGAATTGGTATAGATATGATCGTCAGCGCCTACAAG
____________________________________________________________
consensus AGCCAACCATTGCATGACATCTAAGGAATTGGTATAGATATGATCGTCAGCGCCTACAAG
. : . : . : . : . : . :
JMFS013E11+ ACGGACCAAAACCTCCATGATGGATGTAATACCAATCAAATCAACCATCTGTTGAAAAAC
____________________________________________________________
consensus ACGGACCAAAACCTCCATGATGGATGTAATACCAATCAAATCAACCATCTGTTGAAAAAC
. : . : . : . : . : . :
JMFS013E11+ ATCAGGATGGGCCTGAACATAGTTCATAAGTTGAATGGTCTTCCGCATCATGAGGCATAT
JMFS077B02+ CATAT
____________________________________________________________
consensus ATCAGGATGGGCCTGAACATAGTTCATAAGTTGAATGGTCTTCCGCATCATGAGGCATAT
. : . : . : . : . : . :
JMFS013E11+ AACAACCTTGCTAAAATATCCAGCCAACAAGGCGCTATGAGGACGACTTGCTTCCAAGAA
JMFS077B02+ AACAACCTTGCTAAAATATCCAGCCAACAAGGCGCTATGAGGACGACTTGCTTCCAAGAA
JMFS057H04+ TTGCTAAAATATCCAGCCAACAAGGCGCTATGAGGACGACTTGCTTCCAAGAA
JMSF020G08+ AATATCCAGCCANCAAGGCGCTATGAGGACGACTTGCTTCCAAGAA
JMFS108A02+ TATCCAGCCAACAAGGCGCTATGAGGACGACTTGCTTCCAAGAA
JMFS112B06+ CGACTTGCTTCCAAGAA
JMFS112B07+ CGACTTGCTTCCAAGAA
JMFS091D04+ AAGAA
____________________________________________________________
consensus AACAACCTTGCTAAAATATCCAGCCAACAAGGCGCTATGAGGACGACTTGCTTCCAAGAA
. : . : . : . : . : . :
JMFS013E11+ GGAAAATAATAAATTCATTAACTCTTCCTCCTCCACCAAAGTCTTAAGGATAACATCAAT
JMFS077B02+ GGAAAATAATAAATTCATTAACTCTTCCTCCTCCACCAAAGTCTTAAGGATAACATCAAT
JMFS057H04+ GGAAAATAATAAATTCATTAACTCTTCCTCCTCCACCAAAGTCTTAAGGATAACATCAAT
JMSF020G08+ GGAAAATAATAAATTCATTAACTCTTCCTCCTCCACCAAAGTCTTAAGGATAACATCAAT
JMFS108A02+ GGAAAATAATAAATTCATTAACTCTTCCTCCTCCACCAAAGTCTTAAGGATAACATCAAT
JMFS112B06+ GGAAAATAATAAATTCATTAACTCTTCCTCCTCCACCAAAGTCTTAAGGATAACATCAAT
JMFS065E08+ ACTCTTCCTCCGCCACCAGAGTCTTAAGGATAACATCAAT
JMFS112B07+ GGAAAATAATANATTCATTAACTCTTCCTCCTCCACCAAAGTCTTAAGGATAACATCAAT
JMFS091D04+ GGAAAATAATAAATTCATTAACTCTTCCTCCTCCACCAAAGTCTTAAGGATAACATCAAT
JMFS076H03+ TAAGGATAACATCAAT
____________________________________________________________
consensus GGAAAATAATAAATTCATTAACTCTTCCTCCTCCACCAAAGTCTTAAGGATAACATCAAT
. : . : . : . : . : . :
JMFS013E11+ TTCGCATGTGAATATCTCACATGCAATGAAAGGAAACTTGAATGTCCGTTTGTTATCTAT
JMFS077B02+ TTCGCATGTGAATATCTCACATGCAATGAAAGGAAACTTGAATGTCCGTTTGTTATCTAT
JMFS057H04+ TTCGCATGTGAATATCTCACATGCAATGAAAGGAAACTTGAATGTCCGTTTGTTATCTAT
JMSF020G08+ TTCGCATGTGAATATCTCACATGCAATGAAAGGAAACTTGAATGTCCGTTTGTTATCTAT
JMFS108A02+ TTCGCATGTGAATATCTCACATGCAATGAAAGGAAACTTGAATGTCCGTTTGTTATCTAT
JMFS112B06+ TTCGCATGTGAATATCTCACATGCAATGAAAGGAAACTTGAATGTCCGTTTGTTATCTAT
JMFF018G17+ CACATGCAATGAAAGGAAACTTGAATGTCCGTTTGTTATCTAT
JMFS065E08+ TTAGCATGTGCATATCTCACATGCAATGAAAGGACCCTTGAATGTCCGTTGCTTATCTAT
JMFS112B07+ TTCGCATGTGAATATCTCACATGCAATGAAAGGAAACTTGAATGTCCGTTTGTTATCTAT
JMFS091D04+ TTCGCATGTGAATATCTCACATGCAATGAAAGGAAACTTGAATGTCCGTTTGTTATCTAT
JMFS076H03+ TTCGCATGTGAATATCTCACATGCAATGAAAGGAAACTTGAATGTCCGTTTGTTATCTAT
____________________________________________________________
consensus TTCGCATGTGAATATCTCACATGCAATGAAAGGAAACTTGAATGTCCGTTTGTTATCTAT
. : . : . : . : . : . :
JMFS013E11+ -ATCACTGGAAGGCTCTTCAATAACATAACGCAGTAACTGTTCAACCTGTGCTCTATCCC
JMFS077B02+ -ATCACTGGAAGGCTCTTCAATAACATAACGCAGTAACTGTTCAACCTGTGCTCTATCCC
JMFS057H04+ -ATCACTGGAAGGCTCTTCAATAACATAACGCAGTAACTGTTCAACCTGTGCTCTATCCC
JMSF020G08+ -ATCACTGGAAGGCTCTTCAATAACATAACGCAGTAACTGTTCAACCTGTGCTCTATCCC
JMFS108A02+ -ATCACTGGAAGGCTCTTCAATAACATAACGCAGTAACTGTTCAACCTGTGCTCTATCCC
JMFS112B06+ -ATCACTGGAAGGCTCTTCAATAACATAACGCAGTAACTGTTCAACCTGTGCTCTATCCC
JMFF018G17+ -ATCACTGGAAGGCTCTTCAATAACATAACGCAGTAACTGTTCAACCTGTGCTCTATCCC
JMFS065E08+ GATCACTGGAAGGCTCTTCAATAACATAACGCAGTAACTGTTCCACTTGTGCTCTATCCC
JMFS112B07+ -ATCACTGGAAGGCTCTTCAATAACATAACGCAGTAACTGTTCAACCTGTGCTCTATCCC
JMFS091D04+ -ATCACTGGAAGGCTCTTCAATAACATAACGCAGTAACTGTTCAACCTGTGCTCTATCCC
JMFS076H03+ -ATCACTGGAAGGCTCTTCAATAACATAACGCAGTAACTGTTCAACCTGTGCTCTATCCC
____________________________________________________________
consensus -ATCACTGGAAGGCTCTTCAATAACATAACGCAGTAACTGTTCAACCTGTGCTCTATCCC
. : . : . : . : . : . :
JMFS013E11+ TCAAAAAATTTATGAGGCGACTATTCAAAGCTT
JMFS077B02+ TCAAAAAATTTATGAGGCGACTATTCAAAGCTTTGCATTCTTGGATTATCTCCTCTTCAT
JMFS057H04+ TCAAAAAATTTATGAGGCGACTATTCAAAGCTTTGCATTCTTGGATTATCTCCTCTTCAT
JMSF020G08+ TCAAAAAATTTATGAGGCGACTATTCAAAGCTTTGCATTCTTGGATTATCTCCTCTTCAT
JMFS108A02+ TCAAAAAATTTATGAGGCGACTATTCAAAGCTTTGCATTCTTGGATTATCTCCTCTTCAT
JMFS112B06+ TCAAAAAATTTATGAGGCGACTATTCAAAGCTTTGCATTCTTGGATTATCTCCTCTTCAT
JMFF018G17+ TCAAAAAATTTATGAGGCGACTATTCAAAGATTTGCATTCTTGGATTATCTCCTCTTCAT
JMFS065E08+ TCACAGAATGTATGAGGCGACTATTCATAGCTATGCATTATTGGAGGATCTCCTATTCAT
JMFS112B07+ TCAAAAAATTTATGAGGCGACTATTCAAAGCTTTGCATTCTTGGATTATCTCCTCTTCAT
JMFS091D04+ TCAAAAAATTTATGAGGCGACTATTCAAAGCTTTGCATTCTTGGATTATCTCCTCTTCAT
JMFS076H03+ TCAAAAAATTTATGAGGCGACTATTCAAAGCTTTGCATTCTTGGATTATCTCCTCTTCAT
____________________________________________________________
consensus TCAAAAAATTTATGAGGCGACTATTCAAAGCTTTGCATTCTTGGATTATCTCCTCTTCAT
. : . : . : . : . : . :
JMFS077B02+ CAAGAAGCTCTTCCAGAGTGAAATTTTCCTTGTCCAATATGGCTTCGACCGGCGAAGAAG
JMFS057H04+ CAAGAAGCTCTTCCAGAGTGAAATTTTCCTTGTCCAATATGGCTTCGACCGGCGAAGAAG
JMSF020G08+ CAAGAAGCTCTTCCAGAGTGAAATTTTCCTTGTCCAATATGGCTTCGACCGGCGAAGAAG
JMFS108A02+ CAAGAAGCTCTTCCAGAGTGAAATTTTCCTTGTCCAATATGGCTTCGACCGGCGAAGAAG
JMFS112B06+ CAAGAAGCTCTTCCAGAGTGAAATTTTCCTTGTCCAATATGGCTTCGACCGGCGAAGAAG
JMFF018G17+ CAAGAAGCTCTTCCAGAGTGAAATTTTCCTTGTCCAATATGGCTTCGACCGGCGAAGAAG
JMFS065E08+ CAAGGAGCTCGTCCAGAGTGACATTTTCCTTGTCCAATATGGCTTCGAGCGCAAGAGAAG
JMFS112B07+ CAAGAAGCTCTTCCAGAGTGAAATTTTCCTTGTCCAATATGGCTTCGACCGGCGAAGAAG
JMFS091D04+ CAAGAAGCTCTTCCAGAGTGAAATTTTCCTTGTCCAATATGGCTTCGACCGGCGAAGAAG
JMFS076H03+ CAAGAAGCTCTTCCAGAGTGAAATTTTCCTTGTCCAATATGGCTTCGACCGGCGAAGAAG
____________________________________________________________
consensus CAAGAAGCTCTTCCAGAGTGAAATTTTCCTTGTCCAATATGGCTTCGACCGGCGAAGAAG
. : . : . : . : . : . :
JMFS077B02+ CCGAGAGTGGTGTCAGCTTCCAAAACATATCTCGAATGCGCGTCCGCGGCTATAGATACA
JMFS057H04+ CCGAGAGTGGTGTCAGCTTCCAAAACATATCTCGAATGCGCGTCCGCGGCTATAGATACA
JMSF020G08+ CCGAGAGTGGTGTCAGCTTCCAAAACATATCTCGAATGCGCGTCCGCGGCTATAGATACA
JMFS108A02+ CCGAGAGTGGTGTCAGCTTCCAAAACATATCTCGAATGCGCGTCCGCGGCTATAGATACA
JMFS112B06+ CCGAGAGTGGTGTCAGCTTCCAAAACATATCTCGAATGCGCGTCCGCGGCTATAGATACA
JMFF018G17+ CCGAGAGTGGTGTCAGCTTCCAAAACATATCTCGAATGCGCGTCCGCGGCTATAGATACA
JMFS065E08+ CCGAGAGTGGTGTCAGCTTTCATAACATATCTCGAATGCGCGTCCTCGGCTATAGATACA
JMFS112B07+ CCGAGAGTGGTGTCAGCTTCCAAAACATATCTCGAATGCGCGTCCGCGGCTATAGATACA
JMFS091D04+ CCGAGAGTGGTGTCAGCTTCCAAAACATATCTCGAATGCGCGTCCGCGGCTATAGATACA
JMFS076H03+ CCGAGAGTGGTGTCAGCTTCCAAAACATATCTCGAATGCGCGTCCGCGGCTATAGATACA
____________________________________________________________
consensus CCGAGAGTGGTGTCAGCTTCCAAAACATATCTCGAATGCGCGTCCGCGGCTATAGATACA
. : . : . : . : . : . :
JMFS077B02+ GATATAGGTATGTAAACGGTGAGAGATGAAGACGAGCGGCGAGCTGAAGGCTGGAGCGAA
JMFS057H04+ GATATAGGTATGTAAACGGTGAGAGATGAAGACGAGCGGCGAGCTGAAGGCTGGAGCGAA
JMSF020G08+ GATATAGGTATGTAAACGGTGAGAGATGAAGACGAGCGGCGAGCTGAAGGCTGGAGCGAA
JMFS108A02+ GATATAGGTATGTAAACGGTGAGAGATGAAGACGAGCGGCGAGCTGAAGGCTGGAGCGAA
JMFS112B06+ GATATAGGTATGTAAACGGTGAGAGATGAAGACGAGCGGCGAGCTGAAGGCTGGAGCGAA
JMFF018G17+ GATATAGGTATGTAAACGGTGAGAGATGAAGACGAGCGGCGAGCTGAAGGCTGGAGCGAA
JMFS065E08+ GATATAGGTATGTAAGCGGTAAGAGATGAAGACGATCGGCGAG
JMFS112B07+ GATATAGGTATGTAAACGGTGAGAGATGAAGACGAGCGGCGAGCTGAAGGCTGGAGCGAA
JMFS091D04+ GATATAGGTATGTAAACGGTGAGAGATGAAGACGAGCGGCGAGCTGAAGGCTGGAGCGAA
JMFS076H03+ GATATAGGTATGTAAACGGTGAGAGATGAAGACGAGCGGCGAGCTGAAGGCTGGAGCGAA
____________________________________________________________
consensus GATATAGGTATGTAAACGGTGAGAGATGAAGACGAGCGGCGAGCTGAAGGCTGGAGCGAA
. : . : . : . : . : . :
JMFS077B02+ CTAGAAAACTAGATCTGTAAACCCTAAAGTTGAATCTCGGACATGAGAGGCCGAGATTTG
JMFS057H04+ CTAGAAAACTAGATCTGTAAACCCTAAAGTTGAATCTCGGACATGAGAGGCCGAGATTTG
JMSF020G08+ CTAGAAAACTAGATCTGTAAACCCTAAAGTTGAATCTCGGACATGAGAGGCCGAGATTTG
JMFS108A02+ CTAGAAAACTAGATCTGTAAACCCTAAAGTTGAATCTCGGACATGAGAGGCCGAGATTTG
JMFS112B06+ CTAGAAAACTAGATCTGTAAACCCTAAAGTTGAATCTCGGACATGAGAGGCCGAGATTTG
JMFF018G17+ CTAGAAAACTAGATCTGTAAACCCTAAAGTTGAATCTCGGACATGAGAGGCCGAGATTTG
JMFS112B07+ CTAGAAAACTAGATCTGTAAACCCTAAAGTTGAATCTCGGACATGAGAGGCCGAGATTTG
JMFS091D04+ CTAGAAAACTAGATCTGTAAACCCTAAAGTTGAATCTCGGACATGAGAGGCCGAGATTTG
JMFS076H03+ CTAGAAAACTAGATCTGTAAACCCTAAAGTTGAATCTCGGACATGAGAGGCCGAGATTTG
____________________________________________________________
consensus CTAGAAAACTAGATCTGTAAACCCTAAAGTTGAATCTCGGACATGAGAGGCCGAGATTTG
. : . : . : . : . : . :
JMFS077B02+ AGGTGAGGATAGACGTAGGGCTTTAGGCAGAGACAGCAAAAACCCTAAAATTTTGACGAA
JMFS057H04+ AGGTGAGGATAGACGTAGGGCTTTAGGCAGAGACAGCAAAAACCCTAAAATTTTGACGAA
JMSF020G08+ AGGTGAGGATAGACGTAGGGCTTTAGGCAGAGACAGCAAAAACCCTAAAATTTTGACGAA
JMFS108A02+ AGGTGAGGATAGACGTAGGGCTTTAGGCAGAGACAGCAAAAACCCTAAAATTTTGACGAA
JMFS112B06+ AGGTGAGGATAGACGTAGGGCTTTAGGCAGAGACAGCAAAAACCCTAAAATTTTGACGAA
JMFF018G17+ AGGTGAGGATAGACGTAGGGCTTTAGGCAGAGACAGCAAAAACCCTAAAATTTTGACGAA
JMFS112B07+ AGGTGAGGATAGACGTAGGGCTTTAGGCAGAGACAGCAAAAACCCTAAAATTTTGACGAA
JMFS091D04+ AGGTGAGGATAGACGTAGGGCTTTAGGCAGAGACAGCAAAAACCCTAAAATTTTGACGAA
JMFS076H03+ AGGTGAGGATAGACGTAGGGCTTTAGGCAGAGACAGCAAAAACCCTAAAATTTTGACGAA
____________________________________________________________
consensus AGGTGAGGATAGACGTAGGGCTTTAGGCAGAGACAGCAAAAACCCTAAAATTTTGACGAA
. : . : . : . : . : . :
JMFS077B02+ GAAGAAGAAGAAAAGGATCAAA
JMFS057H04+ GAAGAAGAAAAAAAGGATCAAACGAGAGCAAAGCC
JMSF020G08+ GAAGAAGAAGAAAAGGATCAAACGAGAGCAAAGCCGC
JMFS108A02+ GAAGAAGAAGAAAAGGATCAAACGAGAGCAAAGCCGCCAGGCCAG
JMFS112B06+ GAAGAAGAAGAAAAGGATCAAACGAGAGCAAAGCCGCCAGGCCAGGACCGAAAGGTTAGA
JMFF018G17+ GAAGAAGAAGAAAAGGATCAAACGAGAGCAAAGCCGC
JMFS112B07+ GAAGAAGAAGAAAAGGATCAAACGAGAGCAAAGCCGCCAGGCCAGGACCGAAAGGTTAGA
JMFS091D04+ GAAGAAGAAGAAAAGGATCAAACGAGAGCAAAGCCGCCAGGCCAGGACCGAAAGGTTAGA
JMFS076H03+ GAAGAAGAAGAAAAGGATCAAACGAGAGCAAAGCCGCTGTACGCAGACCTAGTTTTGGGA
____________________________________________________________
consensus GAAGAAGAAGAAAAGGATCAAACGAGAGCAAAGCCGCCAGGCCAGGACCGAAAGGTTAGA
. : . : . : . : . : . :
JMFS112B06+ GATGTGTTTTT
JMFS112B07+ GATGTGTTTTT
JMFS091D04+ GATGTGTTTTT
JMFS076H03+ ACGAGGATGAAGGAATTTGCCATAGCTGTAACAGACTCATTCCCTTTCTTCACTAAGCAC
____________________________________________________________
consensus GATGTGTTTTTGGAATTTGCCATAGCTGTAACAGACTCATTCCCTTTCTTCACTAAGCAC