| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF007P08 | Sequence | 561 | 013128 (6) | ref|XP_006348478.1| | 182 | PREDICTED: uncharacterized protein LOC102581750 [Solanum tuberosum] | 654 | 013128 (6) | ref|XP_009768005.1| | 3e-55 | PREDICTED: protein YLS9-like [Nicotiana sylvestris] |
| JMFF041L08 | Sequence | 655 | 013128 (6) | emb|CDP10610.1| | 9e-73 | unnamed protein product [Coffea canephora] | 542 | 004094 (8) | gb|ADX99209.1| | 6e-60 | zeaxanthin epoxidase [Ipomoea nil] |
| JMFN040K04 | Sequence | 562 | 013128 (6) | ref|XP_009768005.1| | 1e-45 | PREDICTED: protein YLS9-like [Nicotiana sylvestris] | |||||
| JMFN044M18 | Sequence | 633 | 013128 (6) | emb|CDP10610.1| | 1e-81 | unnamed protein product [Coffea canephora] | |||||
| JMFS073F05 | Sequence | 618 | 013128 (6) | emb|CDP10610.1| | 6e-73 | unnamed protein product [Coffea canephora] | |||||
This contig is upended
. : . : . : . : . : . :
JMFN040K04+ TAAC
rJMFF007P08- TATTTGTCATCCCATCCTTAAC
____________________________________________________________
consensus TATTTGTCATCCCATCCTTAAC
. : . : . : . : . : . :
JMFN040K04+ CTTGCTTACATCATTGTATATTTTGCTGTCACTTCCTCGTCGTTATTTTTGTTTTTCTTT
rJMFF007P08- CTTGCTTACATCATTGTATATTTTGCTGTCACTTCCTCGTCGTTATTTTTGTTTTTCTTT
____________________________________________________________
consensus CTTGCTTACATCATTGTATATTTTGCTGTCACTTCCTCGTCGTTATTTTTGTTTTTCTTT
. : . : . : . : . : . :
JMFN040K04+ TTTAAATAGCAAAATCTACAATTATTTTTCACCTGTATTCTGGGCACTTTGGCAGTGGGG
rJMFF007P08- TTTAAATAGCAAAATCTACAATTATTTTTCACCTGTATTCTGGGCACTTTGGCAGTGGGG
____________________________________________________________
consensus TTTAAATAGCAAAATCTACAATTATTTTTCACCTGTATTCTGGGCACTTTGGCAGTGGGG
. : . : . : . : . : . :
JMFN040K04+ TAAAATGATAAATAATAAAAGTAAAAACAGGGAAAATGATCATGACTGTAGTAAATACTT
rJMFF007P08- TAAAATGATAAATAATAAAAGTAAAAACAGGGAAAATGATCATGACTGTAGTAAATACTT
____________________________________________________________
consensus TAAAATGATAAATAATAAAAGTAAAAACAGGGAAAATGATCATGACTGTAGTAAATACTT
. : . : . : . : . : . :
JMFN040K04+ GACGGCGCGGCGACGTTGACTTGACGATTAAAGGCTAACGTCGCAGCTCGAGACGAGCTG
rJMFF007P08- GACGGCGCGGCGACGTTGACTTGACGATTAAAGGCTAACGTCGCAGCTCGAGACGAGCTG
____________________________________________________________
consensus GACGGCGCGGCGACGTTGACTTGACGATTAAAGGCTAACGTCGCAGCTCGAGACGAGCTG
. : . : . : . : . : . :
JMFN040K04+ GTATTTCACGGCGTTGCCGACGACGATGCCGCCGGGTCTGGGAGTGTCTCCGAACGGAAT
rJMFF007P08- GTATTTCACGGCGTTGCCGACGACGATGCCGCCGGGTCTGGGAGTGTCTCCGAACGGAAT
JMFF041L08+ GTGTCTCCGAACGGAAT
JMFN044M18+ GAACGGAAT
JMFS073F05+ GTGTCTCCGAACGGAAT
____________________________________________________________
consensus GTATTTCACGGCGTTGCCGACGACGATGCCGCCGGGTCTGGGAGTGTCTCCGAACGGAAT
. : . : . : . : . : . :
JMFN040K04+ ATAGGCCGGACAAGTGACGTGGATATGGTAGCGGCTAGTGACCAGGGTCCCGACTTTCCA
rJMFF007P08- ATAGGCCGGACAAGTGACGTGGATATGGTAGCGGCTAGTGACCAGGGTCCCGACTTTCCA
JMFF041L08+ ATAGGCCGGACAAGTGACGTGGATATGGTAGCGGCTAGTGACCAGGGTCCCGACTTTCCA
JMFN044M18+ ATAGGCCGGACAAGTGACGTGGATATGGTAGCGGCTAGTGACCAGGGTCCCGACTTTCCA
JMFS073F05+ ATAGGCCGGACAAGTGACGTGGATATGGTAGCGGCTAGTGACCAGGGTCCCGACTTTCCA
____________________________________________________________
consensus ATAGGCCGGACAAGTGACGTGGATATGGTAGCGGCTAGTGACCAGGGTCCCGACTTTCCA
. : . : . : . : . : . :
JMFN040K04+ CCTAATGCGTCCGTCGAGGCGGAAGATGAGCCAGACGCCGCCGTCGGCCTGGGCGGCGCT
rJMFF007P08- CCTAATGCGTCCGTCGAGGCGGAAGATGAGCCAGACGCCGCCGTCGGCCTGGGCGGCGCT
JMFF007P08+ TCGAGGCGGAAGATGAGCCAGACGCCGCCGTCGGCCTGGGCGGCGCT
JMFF041L08+ CCTAATGCGTCCGTCGAGGCGGAAGATGAGCCAGACGCCGCCGTCGGCCTGGGCGGCGCT
JMFN044M18+ CCTAATGCGTCCGTCGAGGCGGAAGATGAGCCAGACGCCGCCGTCGGCCTGGGCGGCGCT
JMFS073F05+ CCTAATGCGTCCGTCGAGGCGGAAGATGAGCCAGACGCCGCCGTCGGCCTGGGCGGCGCT
____________________________________________________________
consensus CCTAATGCGTCCGTCGAGGCGGAAGATGAGCCAGACGCCGCCGTCGGCCTGGGCGGCGCT
. : . : . : . : . : . :
JMFN040K04+ GAGCATAGGGCCGAAGAAGGGCGCAATGGGGACGTCGTTGCCGTAGACGAACGGAGACCA
rJMFF007P08- GAGCATAGGGCCGAANAAGGGCGCAATGGGGACGTCGTTGCCGTANACGAACGGAGACCA
JMFF007P08+ GAGCATAGGGCCGAAGAAGGGCGCAATGGGGACGTCGTTGCCGTAGACGAACGGAGACCA
JMFF041L08+ GAGCATAGGGCCGAAGAAGGGCGCAATGGGGACGTCGTTGCCGTAGACGAACGGAGACCA
JMFN044M18+ GAGCATAGGGCCGAAGAAGGGCGCAATGGGGACGTCGTTGCCGTAGACGAACGGAGACCA
JMFS073F05+ GAGCATAGGGCCGAAGAAGGGCGCAATGGGGACGTCGTTGCCGTAGACGAACGGAGACCA
____________________________________________________________
consensus GAGCATAGGGCCGAAGAAGGGCGCAATGGGGACGTCGTTGCCGTAGACGAACGGAGACCA
. : . : . : . : . : . :
JMFN040K04+ GACGTTGCGGTCCTTGTGGCCCTGGTATACCGGCGGGATAGCGGTGGAATAGGTGATTTG
rJMFF007P08- NACGTTGCGGTCCTTGTGGCCCTGGTATACCGGCGGGATAGCGGTGGAATAGGTGATTTG
JMFF007P08+ GACGTTGCGGTCCTTGTGGCCCTGGTATACCGGCGGGATAGCGGTGGAATAGGTGATTTG
JMFF041L08+ GACGTTGCGGTCCTTGTGGCCCTGGTATACCGGCGGGATAGCGGTGGAATAGGTGATTTG
JMFN044M18+ GACGTTGCGGTCCTTGTGGCCCTGGTATACCGGCGGGATAGCGGTGGAATAGGTGATTTG
JMFS073F05+ GACGTTGCGGTCCTTGTGGCCCTGGTATACCGGCGGGATAGCGGTGGAATAGGTGATTTG
____________________________________________________________
consensus GACGTTGCGGTCCTTGTGGCCCTGGTATACCGGCGGGATAGCGGTGGAATAGGTGATTTG
. : . : . : . : . : . :
JMFN040K04+ CTGGCCGCGGAAGGTGGC
rJMFF007P08- CTGGCCGCGGAAGGTGGCGAAGGTACCGAGCCGGTCGTANTAAATCCCGATCTTGTCGTT
JMFF007P08+ CTGGCCGCGGAAGGTGGCGAAGGTACCGAGCCGGTCGTAGTAAATCCCGATCTTGTCGTT
JMFF041L08+ CTGGCCGCGGAAGGTGGCGAAGGTACCGAGCCGGTCGTAGTAAATCCCGATCTTGTCGTT
JMFN044M18+ CTGGCCGCGGAAGGTGGCGAAGGTACCGAGCCGGTCGTAGTAAATCCCGATCTTGTCGTT
JMFS073F05+ CTGGCCGCGGAAGGTGGCGAAGGTACCGAGCCGGTCGTAGTAAATCCCGATCTTGTCGTT
____________________________________________________________
consensus CTGGCCGCGGAAGGTGGCGAAGGTACCGAGCCGGTCGTAGTAAATCCCGATCTTGTCGTT
. : . : . : . : . : . :
rJMFF007P08- GGGGTTGCGGGAGGTGACGGTGATTTGGATGG
JMFF007P08+ GGGGTTGCGGGAGGTGACGGTGATTTGGATGGTGGCGGAGAGGATGTTGGGGGCGGAGAC
JMFF041L08+ GGGGTTGCGGGAGGTGACGGTGATTTGGATGGTGGCGGAGAGGATGTTGGGGGCGGAGAC
JMFN044M18+ GGGGTTGCGGGAGGTGACGGTGATTTGGATGGTGGCGGAGAGGATGTTGGGGGCGGAGAC
JMFS073F05+ GGGGTTGCGGGAGGTGACGGTGATTTGGATGGTGGCGGAGAGGATGTTGGGGGCGGAGAC
____________________________________________________________
consensus GGGGTTGCGGGAGGTGACGGTGATTTGGATGGTGGCGGAGAGGATGTTGGGGGCGGAGAC
. : . : . : . : . : . :
JMFF007P08+ GTTGAAGTTGAAGATGGTGGCGTCCTGGAGGAGGAAGGTGGGCTTCTTGGGCTGGAGAAC
JMFF041L08+ GTTGAAGTTGAAGATGGTGGCGTCCTGGAGGAGGAAGGTGGGCTTCTTGGGCTGGAGAAC
JMFN044M18+ GTTGAAGTTGAAGATGGTGGCGTCCTGGAGGAGGAAGGTGGGCTTCTTGGGCTGGAGAAC
JMFS073F05+ GTTGAAGTTGAAGATGGTGGCGTCCTGGAGGAGGAAGGTGGGCTTCTTGGGCTGGAGAAC
____________________________________________________________
consensus GTTGAAGTTGAAGATGGTGGCGTCCTGGAGGAGGAAGGTGGGCTTCTTGGGCTGGAGAAC
. : . : . : . : . : . :
JMFF007P08+ CGCCCAGATGATGAGGATGGTGAGGAGGACGAGGAAGAGGA
JMFF041L08+ CGCCCAGATGATGAGGATGGTGAGGAGGACGAGGAAGAGGA
JMFN044M18+ CGCCCAGATGATGAGGATGGTGAGGAGGACGAGGAAGAGGA
JMFS073F05+ CGCCCAGATGATGAGGATGGTGAGGAGGACGAGGAAGAGGAAGATGAGAAGCCCGGCGCA
____________________________________________________________
consensus CGCCCAGATGATGAGGATGGTGAGGAGGACGAGGAAGAGGAAGATGAGAAGCCCGGCGCA
. : . : . : . : . : . :
JMFS073F05+ GCACTGCCGAGTTCGCTTCTTTTTCCGTTCCTTGTGGTGGGTGCACTCCTTCGTAGACAT
____________________________________________________________
consensus GCACTGCCGAGTTCGCTTCTTTTTCCGTTCCTTGTGGTGGGTGCACTCCTTCGTAGACAT
. : . : . : . : . : . :
JMFS073F05+ GGTTTTCCGGCGGCGGCGGCGGCGGGCGGTGGAGAGGGAGTGGTTGTTAGGTGAGAGAAC
____________________________________________________________
consensus GGTTTTCCGGCGGCGGCGGCGGCGGGCGGTGGAGAGGGAGTGGTTGTTAGGTGAGAGAAC