| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF026O05 | Sequence | 598 | 013124 (10) | ref|XP_009619991.1| | 9e-59 | PREDICTED: glutaredoxin-C4 [Nicotiana tomentosiformis] | 659 | 013124 (10) | ref|XP_009619991.1| | 2e-58 | PREDICTED: glutaredoxin-C4 [Nicotiana tomentosiformis] |
| JMFF033O06 | Sequence | 468 | 013124 (10) | ref|XP_009619991.1| | 3e-46 | PREDICTED: glutaredoxin-C4 [Nicotiana tomentosiformis] | 749 | 013124 (10) | ref|XP_009619991.1| | 9e-58 | PREDICTED: glutaredoxin-C4 [Nicotiana tomentosiformis] |
| JMFF043I19 | Sequence | 618 | 013124 (10) | ref|XP_009619991.1| | 1e-57 | PREDICTED: glutaredoxin-C4 [Nicotiana tomentosiformis] | 603 | 013124 (10) | ref|XP_009619991.1| | 2e-36 | PREDICTED: glutaredoxin-C4 [Nicotiana tomentosiformis] |
| JMFF049I04 | Sequence | 620 | 013124 (10) | ref|XP_009619991.1| | 1e-58 | PREDICTED: glutaredoxin-C4 [Nicotiana tomentosiformis] | 606 | 013124 (10) | ref|XP_009619991.1| | 5e-58 | PREDICTED: glutaredoxin-C4 [Nicotiana tomentosiformis] |
| JMFS071A06 | Sequence | 536 | 013124 (10) | ref|XP_009796016.1| | 7e-39 | PREDICTED: glutaredoxin-C4 [Nicotiana sylvestris] | |||||
| JMSF003L10 | Sequence | 425 | 013124 (10) | ref|XP_009619991.1| | 3e-50 | PREDICTED: glutaredoxin-C4 [Nicotiana tomentosiformis] | 561 | 001387 (33) | gb|ACB05671.1| | 5e-51 | chloroplast ferredoxin [Capsicum annuum] |
This contig is upended
. : . : . : . : . : . :
rJMFF043I19- TTTTTTTTTTTTTTCXXXXXXXX
____________________________________________________________
consensus TTTTTTTTTTTTTTCNNNNNNNN
. : . : . : . : . : . :
rJMFF043I19- XXXXXXXXXXXXXXXXXXXXXXXXXXCCCATCCATAATGACCAATCACCACTGAAAGGTC
rJMFF033O06- TAATGACCAATCACCACTGAAAGGTC
____________________________________________________________
consensus NNNNNNNNNNNNNNNNNNNNNNNNNNCCCATCCATAATGACCAATCACCACTGAAAGGTC
. : . : . : . : . : . :
rJMFF043I19- AACATTTCAATTCTTTTAACTAAAGGAACCTTCAGCACAAAACTTAACCACATCTGAGTC
rJMFF033O06- AACATTTCAATTCTTTTAACTAAAGGAACCTTCAGCACAAAACTTAACCACATCTGAGTC
____________________________________________________________
consensus AACATTTCAATTCTTTTAACTAAAGGAACCTTCAGCACAAAACTTAACCACATCTGAGTC
. : . : . : . : . : . :
rJMFF043I19- CTGAGTACTAAAACAAAAACCCCCCACTTTACTTTTTAAAAAATTCAGGCTAGGTTTTCT
rJMFF049I04- AACAAAAACCCACCACATTACATTTTAAAGAATTCAGGCTAGGTTTTCT
rJMFF033O06- CTGAGTACTAGAACAAAAACCCACCACATTACATTTTAAAGAATTCAGGCTAGGTTTTCT
rJMFF026O05- ATTCAGGCTAGGTTTTCT
____________________________________________________________
consensus CTGAGTACTAGAACAAAAACCCACCACATTACATTTTAAAGAATTCAGGCTAGGTTTTCT
. : . : . : . : . : . :
rJMFF043I19- AAATGTTCATTTGTTTGCCACTAAAGGAAAACATCTTACATTAGTTGAAACCAAAAACTG
rJMFF049I04- AGATGTTCATTTGTTTGCCACTAAAGGAGAACATCTTACATTAGTTGAAACCAAAAACTG
rJMFF033O06- AGATGTTCATTTGTTTGCCACTAAAGGAGAACATCTTACATTAGTTGAAACCAAAAACTG
rJMFF026O05- AGATGTTCATTTGTTTGCCACTAAAGGAGAACATCTTACATTAGTTGAAACCAAAAACTG
JMFF026O05+ GTTGAAACCAAAAACTG
JMFF049I04+ AAAGGAGAACATCTTACATTAGTTGAAACCAAAAACTG
____________________________________________________________
consensus AGATGTTCATTTGTTTGCCACTAAAGGAGAACATCTTACATTAGTTGAAACCAAAAACTG
. : . : . : . : . : . :
rJMFF043I19- GCCCTTTTTTCTTTGTTATGGATAACTGATACTACTCTGCAGAAACAAAAGCCGAAGTAT
rJMFF049I04- GTCCTTTTTTCTTTGTTATGGATAACTGATACTACTCTGCAGTAACAAAAGCCGAAGTAT
rJMFF033O06- GTCCTTTTTTCTTTGTTATGGATAACTGATACTACTCTGCAGTAACAAAAGCCGAAGTAT
rJMFF026O05- GTCCTTTTTTCTTTGTTATGGATAACTGATACTACTCTGCAGTAACAAAAGCCGAAGTAT
JMFF026O05+ GTCCTTTTTTCTTTGTTATGGATAACTGATACTACTCTGCAGTAACAAAAGCCGAAGTAT
JMFF049I04+ GTCCTTTTTTCTTTGTTATGGATAACTGATACTACTCTGCAGTAACAAAAGCCGAAGTAT
JMFF043I19+ GTCCTTTNTTCTTTGTTATGGATAACTGATACTACTCTGCAGTAACAAAAGCCGAAGTAT
____________________________________________________________
consensus GTCCTTTTTTCTTTGTTATGGATAACTGATACTACTCTGCAGTAACAAAAGCCGAAGTAT
. : . : . : . : . : . :
rJMFF043I19- TTATCTTGGGCTGCCATTTAATTGCATTAGGTTCAAAAATCATCCTTGCTTACATTAAAA
rJMFF049I04- TTATCTTGTGCTGCCATTTAATTGCATTAGGTTCAAAGATCATCCTTGCTTACATTAAGA
rJMFF033O06- TTATCTTGTGCTGCCATTTAATTGCATTAGGTTCAAAGATCATCCTTGCTTACATTAAGA
rJMFF026O05- TTATCTTGTGCTGCCATTTAATTGCATTAGGTTCAAAGATCATCCTTGCTTACATTAAGA
JMFF026O05+ TTATCTTGTGCTGCCATTTAATTGCATTAGGTTCAAAGATCATCCTTGCTTACATTAAGA
JMFF049I04+ TTATCTTGTGCTGCCATTTAATTGCATTAGGTTCAAAGATCATCCTTGCTTACATTAAGA
JMFF043I19+ TTATCTTGTGCTGCCATTTAATTGCATTAGGTTCAAAGATCATCCTTGCTTACATTAAGA
____________________________________________________________
consensus TTATCTTGTGCTGCCATTTAATTGCATTAGGTTCAAAGATCATCCTTGCTTACATTAAGA
. : . : . : . : . : . :
rJMFF043I19- CCTAGGAGTTTAGCCAATTTTCCGCTTTCATAGGCCTCAATAGTATCATCAAATCCTCCG
rJMFF049I04- CCTAGGAGTTTAGCCAATTTTCCGCTTTCATAGGCCTCGATAGTATCATCAGATCCTCCG
rJMFF033O06- CCTAGGAGTTTAGCCAATTTTCCGCTTTCATAGGCCTCGATAGTATCATCAGATCCTCCG
rJMFF026O05- CCTAGGAGTTTAGCCAATTTTCCGCTTTCATAGGCCTCGATAGTATCATCAGATCCTCCG
JMSF003L10+ TTTCATAGGCCTCGATAGTATCATCAGATCCTCCG
JMFF026O05+ CCTAGGAGTTTAGCCAATTTTCCGCTTTCATAGGCCTCGATAGTATCATCAGATCCTCCG
JMFF049I04+ CCTAGGAGTTTAGCCAATTTTCCGCTTTCATAGGCCTCGATAGTATCATCAGATCCTCCG
JMFF043I19+ CCTAGGAGTTTAGCCAATTTTCCGCTTTCATAGGCCTCGATAGTATCATCAGATCCTCCG
JMFF033O06+ CCTCGATAGTATCATCAGATCCTNCG
____________________________________________________________
consensus CCTAGGAGTTTAGCCAATTTTCCGCTTTCATAGGCCTCGATAGTATCATCAGATCCTCCG
. : . : . : . : . : . :
rJMFF043I19- ATGTGATTTCCATTAATGAAAACCTGTGGCACCGTACGCCTTCCAACCACCTCATTTACG
rJMFF049I04- ATGTGCTTTCCATTAATGAAAACCTGTGGCACCGTACGCCTTCCAACCACCTCACTTACG
rJMFF033O06- ATGTGCTTTCCATTAATGAAAACCTGTGGCACCGTACGCCTTCCAACCACCTCACTTACG
rJMFF026O05- ATGTGCTTTCCATTAATGAAAACCTGTGGCACCGTACGCCTTCCAACCACCTCACTTACG
JMSF003L10+ ATGTGCTTTCCATTAATGAAAACCTGTGGCACCGTACGCCTTCCAACCACCTCACTTACG
JMFF026O05+ ATGTGCTTTCCATTAATGAAAACCTGTGGCACCGTACGCCTTCCAACCACCTCACTTACG
JMFF049I04+ ATGTGCTTTCCATTAATGAAAACCTGTGGCACCGTACGCCTTCCAACCACCTCACTTACG
JMFF043I19+ ATGTGATTTCCATTAATGAAAACCTGTGGCACCGTACGCCTTCCAACCACCTCACTTACG
JMFF033O06+ ATGTGCTTTCCATTAATGAAAACCTGTGGCACCGTACGCCTTCCAACCACCTCACTTACG
JMFS071A06+ GCTTTCCATTAATGAAAACCTGTGGCACCGTACGCCTTCCAACCACCTCACTTACG
____________________________________________________________
consensus ATGTGCTTTCCATTAATGAAAACCTGTGGCACCGTACGCCTTCCAACCACCTCACTTACG
. : . : . : . : . : . :
rJMFF043I19- GCATTTTGAATAAGCCATCCATCATCTCTCTCATCAAGCTCAACAACATAAGCTTTCTGC
rJMFF049I04- GCATTTTGAATAAGCCATCCATCATCTCTCTCATCAAGCTCAACAACATAAGCTTTCTGC
rJMFF033O06- GCATTTTGAATAAGCCATCCATCATCTCTCTCATCAAGCTCAACAACATAAGCTTTCTGC
rJMFF026O05- GCATTTTGAATAAGCCATCCATCATCTCTCTCATCAAGCTCAACAACATAAGCTTTCTGC
JMSF003L10+ GCATTTTGAATAAGCCATCCATCATCTCTCTCATCAAGCTCAACAACATAAGCTTTCTGC
JMFF026O05+ GCATTTTGAATAAGCCATCCATCATCTCTCTCATCAAGCTCAACAACATAAGCTTTCTGC
JMFF049I04+ GCATTTTGAATAAGCCATCCATCATCTCTCTCATCAAGCTCAACAACATAAGCTTTCTGC
JMFF043I19+ GCATTTTGAATAAGCCATCCATCATCTCTCTCATCAAGCTCAACAACATAAGCTTTCTGC
JMFF033O06+ GCATTTTGAATAAGCCATCCATCATCTCTCTCATCAAGCTCAACAACATAAGCTTTCTGC
JMFS071A06+ GCATTTTGAATAAGCCATCCATCATCTCTCTCATCAAGCTCAACAACATAAGCTTTCTGC
____________________________________________________________
consensus GCATTTTGAATAAGCCATCCATCATCTCTCTCATCAAGCTCAACAACATAAGCTTTCTGC
. : . : . : . : . : . :
rJMFF043I19- TTCAATTCTTTAAAGACAGCCTTTGCCCTTTTA
rJMFF049I04- TTCAATTCTTTAAAGACAGCCTTTGCCCTTTTACAATATGGGCAGTAGGATTTGGAGAAA
rJMFF033O06- TTCAATTCTTTAAAGACAGCCTTTGCCCTTTTACAATATGGGCAGTAGGATTTGGAGAAA
rJMFF026O05- TTCAATTCTTTAAAGACAGCCTTTGCCCTTTTACAATATGGGCAGTAGGATTTGGAGAAA
JMSF003L10+ TTCAATTCTTTAAAGACAGCCTTTGCCCTTTTACAATATGGGCAGTAGGATTTGGAGAAA
JMFF026O05+ TTCAATTCTTTAAAGACAGCCTTTGCCCTTTTACAATATGGGCAGTAGGATTTGGAGAAA
JMFF049I04+ TTCAATTCTTTAAAGACAGCCTTTGCCCTTTTACAATATGGGCAGTAGGATTTGGAGAAA
JMFF043I19+ TTCAATTCTTTAAAGACAGCCTTTGCCCTTTTACAATATGGGCAGTAGGATTTGGAGAAA
JMFF033O06+ TTCAATTCTTTAAAGACAGCCTTTGCCCTTTTACAATATGGGCAGTAGGATTTGGAGAAA
JMFS071A06+ TTCAATTCTTTAAAGACAGCCTTTGCCCTTTTACAATATGGGCAGTAGGATTTGGAGAAA
____________________________________________________________
consensus TTCAATTCTTTAAAGACAGCCTTTGCCCTTTTACAATATGGGCAGTAGGATTTGGAGAAA
. : . : . : . : . : . :
rJMFF049I04- ATGACAATGGAATGAGAAGAAATGGTTTTCTTCACAAAGGCGGCGGCAGCTTCCGATTGG
rJMFF033O06- ATGACAATGGAATGAGAAGAAATGGTTTTCTTCACAAAGGCGGCGGCAGCTTCCGATTGG
rJMFF026O05- ATGACAATGGAATGAGAAGAAATGGTTTTCTTCACAAAGGCGGCGGCAGCTTCCGATTGG
JMSF003L10+ ATGACAATGGAATGAGAAGAAATGGTTTTCTTCACAAAGGCGGCGGCAGCTTCCGATTGG
JMFF026O05+ ATGACAATGGAATGAGAAGAAATGGTTTTCTTCACAAAGGCGGCGGCAGCTTCCGATTGG
JMFF049I04+ ATGACAATGGAATGAGAAGAAATGGTTTTCTTCACAAAGGCGGCGGCAGCTTCCGATTGG
JMFF043I19+ ATGACAATGGAATGAGAAGAAATGGTTTTCTTCACAAAGGCGGCGGCAGCTTCCGATTGG
JMFF033O06+ ATGACAATGGAATGAGAAGAAATGGTTTTCTTCACAAAGGCGGCGGCAGCTTCCGATTGG
JMFS071A06+ ATGACAATGGAATGAGAAGAAATGGTTTTCTTCACAAAGGCGGCGGCAGCTTCCGATTGG
____________________________________________________________
consensus ATGACAATGGAATGAGAAGAAATGGTTTTCTTCACAAAGGCGGCGGCAGCTTCCGATTGG
. : . : . : . : . : . :
rJMFF049I04- GCATCGTCTTCGTCGGAATCGTCGATGGATGCAGATGTGGTCCCCGCAAACACAAGGGCA
rJMFF033O06- GCATCGTCTTCGTCGGAATCGTCGATGGATGCAGATGTGGTCCCCGCAAACACAAGGGCA
rJMFF026O05- GCATCGTCTTCGTCGGAATCGTCGATGGATGCAGATGTGGTCCCCGCAAACACAAGGGCA
JMSF003L10+ GCATCGTCTTCGTCGGAATCGTCGATGGATGCAGATGTGGTCCCCGCAAACACAAGGGCA
JMFF026O05+ GCATCGTCTTCGTCGGAATCGTCGATGGATGCAGATGTGGTCCCCGCAAACACAAGGGCA
JMFF049I04+ GCATCGTCTTCGTCGGAATCGTCGATGGATGCAGATGTGGTCCCCGCAAACACAAGGGCA
JMFF043I19+ GCATCGTCTTCGTCGGAATCGTCGATGGATGCAGATGTGGTCCCCGCAAACACAAGGGCA
JMFF033O06+ GCATCGTCTTCGTCGGAATCGTCGATGGATGCAGATGTGGTCCCCGCAAACACAAGGGCA
JMFS071A06+ GCATCGTCTTCGTCGGAATCGTCGATGGATGCAGATGTGGTCCCCGCAAACACAAGGGCA
____________________________________________________________
consensus GCATCGTCTTCGTCGGAATCGTCGATGGATGCAGATGTGGTCCCCGCAAACACAAGGGCA
. : . : . : . : . : . :
rJMFF049I04- AACAGGATTGTGACC
rJMFF033O06- AACAGGATTGTGACCCCAAACACTACCAAGAGAGATGATTTCGCCATTTGATATAGGGNT
rJMFF026O05- AACAGGATTGTGACCCCAAACACTACCAAGAGAGATGATTTCGCCATTTGATATAGGGTT
JMSF003L10+ AACAGGATTGTGACCCCAAACACTACCAAGAGAGATGATTTCGCCATTTGATATAGGGTT
JMFF026O05+ AACAGGATTGTGACCCCAAACACTACCAAGAGAGATGATTTCGCCATTTGATATAGGGTT
JMFF049I04+ AACAGGATTGTGACCCCAAACACTACCAAGAGAGATGATTTCGCCATTTGATATAGGGTT
JMFF043I19+ AACAGGATTGTGACCCCAAACACTACCAAGAGAGATGATTTCGCCATTTGATATAGGGTT
JMFF033O06+ AACAGGATTGTGACCCCAAACACTACCAAGAGAGATGATTTCGCCATTTGATATAGGGTT
JMFS071A06+ AACAGGATTGTGACCCCAAACCCTACCAAGAGAGATGATTTCGCCATTTGATATAGGGTT
____________________________________________________________
consensus AACAGGATTGTGACCCCAAACACTACCAAGAGAGATGATTTCGCCATTTGATATAGGGTT
. : . : . : . : . : . :
rJMFF033O06- GAG
rJMFF026O05- GAGAAAGATCGATGTAAAGAAATTCGGGCAAGGAGAC
JMSF003L10+ GAGAAAGATCGATGTAAAGAAATTCG
JMFF026O05+ GAGAAAGATCGATGTAAAGAAATTCGGGCAAGGAGAC
JMFF049I04+ GAGAAAGATCGATGTAAAGAAATTCGGGCAAGGAGAC
JMFF043I19+ GAGAAAGATCGATGTAAAGAAATTCGGGCAAGGAGACTTCTGCAGACTTAAAAACTCTGG
JMFF033O06+ GAGAAAGATCGATGTAAAGAAATTCGGGCAAGGAGACTTCTGCAGACTTAAAAACTCTGG
JMFS071A06+ GAGAAAGATCGATGTAAAGAAATTCGGGCAAGGAGACTTCTGCAGACTTAAAAACTCTGG
____________________________________________________________
consensus GAGAAAGATCGATGTAAAGAAATTCGGGCAAGGAGACTTCTGCAGACTTAAAAACTCTGG
. : . : . : . : . : . :
JMFF043I19+ ATGGGTGTGTT
JMFF033O06+ ATGGGTGTGTT
JMFS071A06+ ATGGGTGTGTTCTCGAGTTTTTTTTTTTTTTTTTTGGCTGCTAATAGTTGAGTGTGGCAG
____________________________________________________________
consensus ATGGGTGTGTTCTCGAGTTTTTTTTTTTTTTTTTTGGCTGCTAATAGTTGAGTGTGGCAG
. : . : . : . : . : . :
JMFS071A06+ AACTAATAGCTTAATTTTGAGTGCATTTTGGTAGGGAATGAAATTTTGTATTCACTGCTG
____________________________________________________________
consensus AACTAATAGCTTAATTTTGAGTGCATTTTGGTAGGGAATGAAATTTTGTATTCACTGCTG