Contig 013123:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS056F01Sequence607013123 (2)emb|CDP02360.1|5e-69unnamed protein product [Coffea canephora]
JMFS068F09Sequence610013123 (2)ref|XP_009619273.1|1e-107PREDICTED: protein furry homolog-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFS056F01-                                                        GAAAACAAAAGATGA
                      ____________________________________________________________
consensus                                                          GAAAACAAAAGATGA
 
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JMFS056F01-           TATAATTAACTACATCAAACACAGCTAAAATCCTAGAGAAATTTTCTATATATACACAAA
                      ____________________________________________________________
consensus             TATAATTAACTACATCAAACACAGCTAAAATCCTAGAGAAATTTTCTATATATACACAAA
 
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JMFS056F01-           AGAGAGCACCTTGTTTCTGAATATTGTGTACACTTTAAACAAAAAGTAACTGGAGGAAAC
                      ____________________________________________________________
consensus             AGAGAGCACCTTGTTTCTGAATATTGTGTACACTTTAAACAAAAAGTAACTGGAGGAAAC
 
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JMFS056F01-           AAAATTATAGGCCGGTTCAAGAATTTCCAGTGCTGGTTACAAAAGGAACCAATCTTCGGT
                      ____________________________________________________________
consensus             AAAATTATAGGCCGGTTCAAGAATTTCCAGTGCTGGTTACAAAAGGAACCAATCTTCGGT
 
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JMFS056F01-           AATCTCGCCTCCTCCCGAGGGGAGAGTTATCGAGCACCCTCCCGAGCATCAACCTTGTGT
                      ____________________________________________________________
consensus             AATCTCGCCTCCTCCCGAGGGGAGAGTTATCGAGCACCCTCCCGAGCATCAACCTTGTGT
 
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JMFS056F01-           TCTTCAGCGCTATATCTCGAGGTGTTAGGCCAGATTCGGATGTGCTAGCTTGAGCAGAAC
                      ____________________________________________________________
consensus             TCTTCAGCGCTATATCTCGAGGTGTTAGGCCAGATTCGGATGTGCTAGCTTGAGCAGAAC
 
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JMFS056F01-           CTGTCCCGGGGGCAGTTCCCATTGGGAACTGTAACGGGCCACTGCGAGCTTTGAAGGAAG
                      ____________________________________________________________
consensus             CTGTCCCGGGGGCAGTTCCCATTGGGAACTGTAACGGGCCACTGCGAGCTTTGAAGGAAG
 
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JMFS056F01-           TCTGAGGAGCGAGAATCTTTTCTTCGATCCCACCAAGCCCATTCTCGAATGTCCCTGGCT
                      ____________________________________________________________
consensus             TCTGAGGAGCGAGAATCTTTTCTTCGATCCCACCAAGCCCATTCTCGAATGTCCCTGGCT
 
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JMFS056F01-           CGTGTGGATGGGACCCGGGGGGCATGGAGCTGCAGCTCTGCAAGAGGGCTTCCAGCACAC
                      ____________________________________________________________
consensus             CGTGTGGATGGGACCCGGGGGGCATGGAGCTGCAGCTCTGCAAGAGGGCTTCCAGCACAC
 
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JMFS056F01-           TAAGTGCCTCCCAGCACAGAGTGCTCTCCACCAGCTGAGATACAATGGCGTACATGTGAG
JMFS068F09+                                                             TACATGTGAG
                      ____________________________________________________________
consensus             TAAGTGCCTCCCAGCACAGAGTGCTCTCCACCAGCTGAGATACAATGGCGTACATGTGAG
 
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JMFS056F01-           GACTCTGAGCAGCGTCCATTGGAGTAGGCTGAAGCAACGCCTTCAACATCAG        
JMFS068F09+           GACTCTGAGCAGCGTCCATTGGAGTAGGCTGAAGCAACGCCTTCAACATCAGGAGTATAA
                      ____________________________________________________________
consensus             GACTCTGAGCAGCGTCCATTGGAGTAGGCTGAAGCAACGCCTTCAACATCAGGAGTATAA
 
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JMFS068F09+           CGCGCTGATATTCTGGCGGCCCTCTCTCGAGGAGCTTCAAAAGGTGGCCAAATGCTAGAG
                      ____________________________________________________________
consensus             CGCGCTGATATTCTGGCGGCCCTCTCTCGAGGAGCTTCAAAAGGTGGCCAAATGCTAGAG
 
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JMFS068F09+           CCGAGTGTTTAGGGAACCATTCGTTGCATAGTAGTGGTGAGACGCAGTCTAGAAGGGTCA
                      ____________________________________________________________
consensus             CCGAGTGTTTAGGGAACCATTCGTTGCATAGTAGTGGTGAGACGCAGTCTAGAAGGGTCA
 
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JMFS068F09+           ATGTGCTTCGGATCTCACCACGTGAATACGCGATGAAAACTGCAGCTAGCTCATCCAATG
                      ____________________________________________________________
consensus             ATGTGCTTCGGATCTCACCACGTGAATACGCGATGAAAACTGCAGCTAGCTCATCCAATG
 
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JMFS068F09+           ATTTTGCCCGACACCATCCCGCTATATTGGTTGCCACCGAGGATGCCTTTTGATGCTGCT
                      ____________________________________________________________
consensus             ATTTTGCCCGACACCATCCCGCTATATTGGTTGCCACCGAGGATGCCTTTTGATGCTGCT
 
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JMFS068F09+           GTTGGAATGGGGTTGCAGGTCCACCCACCGCATCCTGGCTGAGATGTAAGCAGAGCCAGG
                      ____________________________________________________________
consensus             GTTGGAATGGGGTTGCAGGTCCACCCACCGCATCCTGGCTGAGATGTAAGCAGAGCCAGG
 
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JMFS068F09+           GAAGCAATCCGATTATGTGCATCAAGAGTCGTGTTTCTGCATCGCCAAAGATTGAATCAC
                      ____________________________________________________________
consensus             GAAGCAATCCGATTATGTGCATCAAGAGTCGTGTTTCTGCATCGCCAAAGATTGAATCAC
 
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JMFS068F09+           ACGAAGGAACGGTGATGAGCGATAGAACTTCAATTGACACACCGTGACTGACAGTTGACA
                      ____________________________________________________________
consensus             ACGAAGGAACGGTGATGAGCGATAGAACTTCAATTGACACACCGTGACTGACAGTTGACA
 
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JMFS068F09+           TGAGTCCTTTAAGAACCAACGGTTGCACTCCTTCAAACACCGGGACCTTTTTGCTGTTTG
                      ____________________________________________________________
consensus             TGAGTCCTTTAAGAACCAACGGTTGCACTCCTTCAAACACCGGGACCTTTTTGCTGTTTG
 
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JMFS068F09+           GTGAGGGTGTAGAAGCATTCCTTGTTTCCAGGCGTTGAAAGTCAGAACTATCGCTAGCAC
                      ____________________________________________________________
consensus             GTGAGGGTGTAGAAGCATTCCTTGTTTCCAGGCGTTGAAAGTCAGAACTATCGCTAGCAC