| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS068A12 | Sequence | 211 | 013122 (9) | ||||||||
| JMSF014D22 | Sequence | 142 | 013122 (9) | ref|XP_007011534.1| | 2e-11 | ABC1 family protein [Theobroma cacao] gb|EOY29153.1| ABC1 family protein [Theobr | |||||
| JMSF017L13 | Sequence | 228 | 009025 (11) | 756 | 013122 (9) | ref|XP_009622904.1| | 5e-43 | PREDICTED: uncharacterized protein LOC104114217 isoform X2 [Nicotiana tomentosi | |||
| JMSF020B14 | Sequence | 678 | 009025 (11) | ref|XP_006355214.1| | 275 | PREDICTED: uncharacterized protein LOC102585966 [Solanum tuberosum] | 759 | 013122 (9) | ref|XP_009622904.1| | 1e-43 | PREDICTED: uncharacterized protein LOC104114217 isoform X2 [Nicotiana tomentosi |
| JMSF027D16 | Sequence | 647 | 009025 (11) | ref|XP_008337091.1| | 9e-104 | PREDICTED: uncharacterized aarF domain-containing protein kinase 1-like [Malus | 804 | 013122 (9) | ref|XP_009622904.1| | 2e-50 | PREDICTED: uncharacterized protein LOC104114217 isoform X2 [Nicotiana tomentosi |
| JMSF028K16 | Sequence | 680 | 009025 (11) | ref|XP_008337091.1| | 3e-83 | PREDICTED: uncharacterized aarF domain-containing protein kinase 1-like [Malus | 746 | 013122 (9) | ref|XP_009622904.1| | 7e-42 | PREDICTED: uncharacterized protein LOC104114217 isoform X2 [Nicotiana tomentosi |
| JMSF040P17 | Sequence | 651 | 009025 (11) | ref|XP_008337091.1| | 6e-106 | PREDICTED: uncharacterized aarF domain-containing protein kinase 1-like [Malus | 783 | 013122 (9) | ref|XP_009622904.1| | 9e-48 | PREDICTED: uncharacterized protein LOC104114217 isoform X2 [Nicotiana tomentosi |
| JMSF048K14 | Sequence | 654 | 009025 (11) | ref|XP_006355214.1| | 268 | PREDICTED: uncharacterized protein LOC102585966 [Solanum tuberosum] | 738 | 013122 (9) | ref|XP_009622904.1| | 1e-39 | PREDICTED: uncharacterized protein LOC104114217 isoform X2 [Nicotiana tomentosi |
| JMSF052H02 | Sequence | 671 | 020129 | 803 | 013122 (9) | ref|XP_009622904.1| | 7e-47 | PREDICTED: uncharacterized protein LOC104114217 isoform X2 [Nicotiana tomentosi | |||
This contig is upended
. : . : . : . : . : . :
rJMSF052H02+ CCTATCATGTTTAATGCACTCN
rJMSF027D16+ TCTGCAGNTACCCTTCCTATCATGTTTAATGCACTCA
rJMSF040P17+ TTTAATGCACTCA
____________________________________________________________
consensus TCTGCAGNTACCCTTCCTATCATGTTTAATGCACTCA
. : . : . : . : . : . :
rJMSF052H02+ CTACTCGCCGTGCCATTATACCTGCTGCCAATGGACATTGCTCAGCTCGTGCACTTGCTC
rJMSF027D16+ CTACTCGCCGTGCCATTATACCTGCTGCCAATGGACATTGCTCAGCTCGTGCACTTGCTC
rJMSF040P17+ CTACTCGCCGTGCCATTATACCTGCTGCCAATGGACATTGCTCAGCTCGTGCACTTGCTC
rJMSF020B14+ GCCATTATACCTGCTGCCAATGGACATTGCTCAGCTCGTGCACTTGCTC
rJMSF028K16+ ACCTGCTGCCAATGGACATTGCTCAGCTCGTGCACTTGCTC
rJMSF048K14+ CCAATGGACATTGCTCAGCTCGTGCACTTGCTC
rJMSF017L13+ ATTATACCTGCTGCCAATGGACATTGCTCAGCTCGTGCACTTGCTC
____________________________________________________________
consensus CTACTCGCCGTGCCATTATACCTGCTGCCAATGGACATTGCTCAGCTCGTGCACTTGCTC
. : . : . : . : . : . :
rJMSF052H02+ GCTACTATGCAGCGCTTGTTGATGGTGGTAAAATTCCCCCACTGTCGTCTTCTTCCATGC
rJMSF027D16+ GCTACTATGCAGCGCTTGTTGATGGTGGTAAAATTCCCCCACTGTCGTCTTCTTCCATGC
rJMSF040P17+ GCTACTATGCAGCGCTTGTTGATGGTGGTAAAATTCCCCCACTGTCGTCTTCTTCCATGC
rJMSF020B14+ GCTACTATGCAGCGCTTGTTGATGGTGGTAAAATTCCCCCACTGTCGTCTTCTTCCATGC
rJMSF028K16+ GCTACTATGCAGCGCTTGTTGATGGTGGTAAAATTCCCCCACTGTCGTCTTCTTCCATGC
rJMSF048K14+ GCTACTATGCAGCGCTTGTTGATGGTGGTAAAATTCCCCCACTGTCGTCTTCTTCCATGC
rJMSF017L13+ GCTACTATGCAGCGCTTGTTGATGGTGGTAAAATTCCCCCACTGTCGTCTTCTTCCATGC
____________________________________________________________
consensus GCTACTATGCAGCGCTTGTTGATGGTGGTAAAATTCCCCCACTGTCGTCTTCTTCCATGC
. : . : . : . : . : . :
rJMSF052H02+ CACCACTGGGAAGCCACCGACACGTTCCTAAATTCCCTTCTCCGAAGACCCCCAAAAAAA
rJMSF027D16+ CACCACTGGGAAGCCACCGACACGTTCCTAAATTCCCTTCTCCGAAGACCCCCAAAAAAA
rJMSF040P17+ CACCACTGGGAAGCCACCGACACGTTCCTAAATTCCCTTCTCCGAAGACCCCCAAAAAAA
rJMSF020B14+ CACCACTGGGAAGCCACCGACACGTTCCTAAATTCCCTTCTCCGAAGACCCCCAAAAAAA
rJMSF028K16+ CACCACTGGGAAGCCACCGACACGTTCCTAAATTCCCTTCTCCGAAGACCCCCAAAAAAA
rJMSF048K14+ CACCACTGGGAAGCCACCGACACGTTCCTAAATTCCCTTCTCCGAAGACCCCCAAAAAAA
rJMSF017L13+ CACCACTGGGAAGCCACCGACACGTTCCTAAATTCCCTTCTCCGAAGACCCCCAAAAAAA
____________________________________________________________
consensus CACCACTGGGAAGCCACCGACACGTTCCTAAATTCCCTTCTCCGAAGACCCCCAAAAAAA
. : . : . : . : . : . :
rJMSF052H02+ AGCTATTAGCTAGATGGAGGAAGGCTGATTCAGAAAGCGGTGATAGCTCTGATAGCGANG
rJMSF027D16+ AGCTATTAGCTAGATGGAGGAAGGCTGATTCAGAAAGCGGTGATAGCTCTGATAGCGATG
rJMSF040P17+ AGCTATTAGCTAGATGGAGGAAGGCTGATTCAGAAAGCGGTGATAGCTCTGATAGCGATG
rJMSF020B14+ AGCTATTAGCTAGATGGAGGAAGGCTGATTCAGAAAGCGGTGATAGCTCTGATAGCGATG
rJMSF028K16+ AGCTATTAGCTAGATGGAGGAAGGCTGATTCAGAAAGCGGTGATAGCTCTGATAGCGATG
rJMSF048K14+ AGCTATTAGCTAGATGGAGGAAGGCTGATTCAGAAAGCGGTGATAGCTCTGATAGCGATG
rJMSF017L13+ AGCTATTAGCTAGATGGAGGAAGGCTGATTCAGAAAGCGGTGATAGCTCTGATAGCGATG
____________________________________________________________
consensus AGCTATTAGCTAGATGGAGGAAGGCTGATTCAGAAAGCGGTGATAGCTCTGATAGCGATG
. : . : . : . : . : . :
rJMSF052H02+ ATGGTTCTAGCAGAAATGCTAGTGGTAACGAGTACGTATTGGTTGTCAATGATGACGNCA
rJMSF027D16+ ATGGTTCTAGCAGAAATGCTAGTGGTAACGAGTACGTATTGGTTGTCAATGATGACGACA
rJMSF040P17+ ATGGTTCTAGCAGAAATGCTAGTGGTAACGAGTACGTATTGGTTGTCAATGATGACGACA
rJMSF020B14+ ATGGTTCTAGCAGAAATGCTAGTGGTAACGAGTACGTATTGGTTGTCAATGATGACGACA
rJMSF028K16+ ATGGTTCTAGCAGAAATGCTAGTGGTAACGAGTACGTATTGGTTGTCAATGATGACGACA
rJMSF048K14+ ATGGTTCTAGCAGAAATGCTAGTGGTAACGAGTACGTATTGGTTGTCAATGATGACGACA
rJMSF017L13+ ATGGTTCTAGCAGAAATGCTAGTGGTAACGAGTACGTATTGGTTGTCAATGATGACGACA
____________________________________________________________
consensus ATGGTTCTAGCAGAAATGCTAGTGGTAACGAGTACGTATTGGTTGTCAATGATGACGACA
. : . : . : . : . : . :
rJMSF052H02+ CTCCAACTGACAGCCACAATGCCAAACTTTTCAAAAACCCAAAAATCCACGAAGCATTTT
rJMSF027D16+ CTCCAACTGACAGCCACAATGCCAAACTTTTCAAAAACCCAAAAATCCACGAAGCATTTT
rJMSF040P17+ CTCCAACTGACAGCCACAATGCCAAACTTTTCAAAAACCCAAAAATCCACGAAGCATTTT
rJMSF020B14+ CTCCAACTGACAGCCACAATGCCAAACTTTTCAAAAACCCAAAAATCCACGAAGCATTTT
rJMSF028K16+ CTCCAACTGACAGCCACAATGCCAAACTTTTCAAAAACCCAAAAATCCACGAAGCATTTT
rJMSF048K14+ CTCCAACTGACAGCCACAATGCCAAACTTTTCAAAAACCCAAAAATCCACGAAGCATTTT
rJMSF017L13+ CTCCAACTGACAGCCACAATGCCAAACTTTTCAAAAACCCAAAAATCCACGAAGCATTTT
____________________________________________________________
consensus CTCCAACTGACAGCCACAATGCCAAACTTTTCAAAAACCCAAAAATCCACGAAGCATTTT
. : . : . : . : . : . :
rJMSF052H02+ TGGGCGTTGGAGAATATGAGAAGCTGACCTATCCGGATGGGCAGTTTGGGCTCGGTTTCA
rJMSF027D16+ TGGGCGTTGGAGAATATGAGAAGCTGACCTATCCGGATGGGCAGTTTGGGCTCGGTTTCA
rJMSF040P17+ TGGGCGTTGGAGAATATGAGAAGCTGACCTATCCGGATGGGCAGTTTGGGCTCGGTTTCA
rJMSF020B14+ TGGGCGTTGGAGAATATGAGAAGCTGACCTATCCGGATGGGCAGTTTGGGCTCGGTTTCA
rJMSF028K16+ TGGGCGTTGGAGAATATGAGAAGCTGACCTATCCGGATGGGCAGTTTGGGCTCGGTTTCA
rJMSF048K14+ TGGGCGTTGGAGAATATGAGAAGCTGACCTATCCGGATGGGCAGTTTGGGCTCGGTTTCA
rJMSF017L13+ TGGGCGTTGGAGAATATGAGAAGCTGACCTATCCGGATGGGCAGTTTGGGCTCGGTTTCA
____________________________________________________________
consensus TGGGCGTTGGAGAATATGAGAAGCTGACCTATCCGGATGGGCAGTTTGGGCTCGGTTTCA
. : . : . : . : . : . :
rJMSF052H02+ AAAGGATACACTCAAAGGACTCCGGCCTNATAGGGTTNGGTCATTCCGGCATGGGTGGAT
rJMSF027D16+ AAAGGATACACTCAAAGGACTCCGGCCTTATAGGGTTTGGTCATTCCGGCATGGGTGGAT
rJMSF040P17+ AAAGGATACACTCAAAGGACTCCGGCCTTATAGGGTTTGGTCATTCCGGCATGGGTGGAT
rJMSF020B14+ AAAGGATACACTCAAAGGACTCCGGCCTTATAGGGTTTGGTCATTCCGGCATGGGTGGAT
rJMSF028K16+ AAAGGATACACTCAAAGGACTCCGGCCTTATAGGGTTTGGTCATTCCGGCATGGGTGGAT
rJMSF048K14+ AAAGGATACACTCAAAGGACTCCGGCCTTATAGGGTTTGGTCATTCCGGCATGGGTGGAT
rJMSF017L13+ AAAGGATACACTCAAAGGACTCCGGCCTTATAGGGTTTGGTCATTCCGGCATGGGTGGAT
____________________________________________________________
consensus AAAGGATACACTCAAAGGACTCCGGCCTTATAGGGTTTGGTCATTCCGGCATGGGTGGAT
. : . : . : . : . : . :
rJMSF052H02+ CCACAGGCTTTTGCGACATGAAGAATAGGTTTGCTATTGCAATAACACTAAACAAGTTGT
rJMSF027D16+ CCACAGGCTTTTGCGACATGAAGAATAGGTTTGCTATTGCAATAACACTAAACAAGTTGT
rJMSF040P17+ CCACAGGCTTTTGCGACATGAAGAATAGGTTTGCTATTGCAATAACACTAAACAAGTTGT
rJMSF020B14+ CCACAGGCTTTTGCGACATGAAGAATAGGTTTGCTATTGCAATAACACTAAACAAGTTGT
rJMSF014D22+ CATGAAGAATAGGTTNGCTATTGCAATAACACTNAACAAGTNGT
rJMSF028K16+ CCACAGGCTTTTGCGACATGAAGAATAGGTTTGCTATTGCAATAACACTAAACAAGTTGT
rJMSF048K14+ CCACAGGCTTTTGCGACATGAAGAATAGGTTTGCTATTGCAATAACACTAAACAAGTTGT
rJMSF017L13+ CCACAGGCTTTTGCGACATGAAGAATAGGTTTGCTATTGCAATAACACTAAACAAGTTGT
____________________________________________________________
consensus CCACAGGCTTTTGCGACATGAAGAATAGGTTTGCTATTGCAATAACACTAAACAAGTTGT
. : . : . : . : . : . :
rJMSF052H02+ CGTTTGGGGGCGTGACTGCAAAAATAATTCAGCTGGTTTGCTCGGAACTTAATATACCAG
rJMSF027D16+ CGTTTGGGGGCGTGACTGCAAAAATAATTCAGCTGGTTTGCTCGGAACTTAATATACCAG
rJMSF040P17+ CGTTTGGGGGCGTGACTGCAAAAATAATTCAGCTGGTTTGCTCGGAACTTAATATACCAG
rJMSF020B14+ CGTTTGGGGGCGTGACTGCAAAAATAATTCAGCTGGTTTGCTCGGAACTTAATATACCAG
rJMSF014D22+ CGTTCGGGGGCGTGACTGCAAAAATAATTCAGCTGGTTTGCTCGGACCNTAATATACCAG
rJMSF028K16+ CGTTTGGGGGCGTGACTGCAAAAATAATTCAGCTGGTTTGCTCGGAACTTAATATACCAG
rJMSF048K14+ CGTTTGGGGGCGTGACTGCAAAAATAATTCAGCTGGTTTGCTCGGAACTTAATATACCAG
rJMSF017L13+ CGTTTGGGGGCGTGACTGCAAAAATAATTCAGCTGGTTTGCTCGGAACTTAATATACCAG
____________________________________________________________
consensus CGTTTGGGGGCGTGACTGCAAAAATAATTCAGCTGGTTTGCTCGGAACTTAATATACCAG
. : . : . : . : . : . :
rJMSF052H02+ TGCCTGAGGAGATTTCCATGAAATTGGAGAGTGAATCTAGTAATTTAGCTCAGCCCATTA
rJMSF027D16+ TGCCTGAGGAGATTTCCATGAAATTGGAGAGTGAATCTAGTAATTTAGCTCAGCCCATTA
rJMSF040P17+ TGCCTGAGGAGATTTCCATGAAATTGGAGAGTGAATCTAGTAATTTAGCTCAGCCCATTA
rJMSF020B14+ TGCCTGAGGAGATTTCCATGAAATTGGAGAGTGAATCTAGTAATTTAGCTCAGCCCATTA
rJMSF014D22+ TGCCTGAGGAGATTTCCANNAAATTGGAGAGTGAATCT
rJMSF028K16+ TGCCTGAGGAGATTTCCATGAAATTGGAGAGTGAATCTAGTAATTTAGCTCAGCCCATTA
rJMSF048K14+ TGCCTGAGGAGATTTCCATGAAATTGGAGAGTGAATCTAGTAATTTAGCTCAGCCCATTA
rJMSF017L13+ TGCCTGAGGAGATTTCCATGAAATTGGAGAGTGAATCTAGTAATTTAGCTCAGCCCATTA
JMFS068A12+ GAGTGAATCTAGTAATTTAGCTCAGCCCATTA
____________________________________________________________
consensus TGCCTGAGGAGATTTCCATGAAATTGGAGAGTGAATCTAGTAATTTAGCTCAGCCCATTA
. : . : . : . : . : . :
rJMSF052H02+ TAANCTGATATAAGCTCCCATCTCATTTTTGTTATTGTCAGATAGTAACATTATTATTAC
rJMSF027D16+ TAAACTGATATAAGCTCCCATCTCATTTTTGTTATTGTCAGATAGTAACATTATTATTA-
rJMSF040P17+ TAAACTGATATAAGCTCCCATCTCATTTTTGTTATTGTCAGATAGTAACATTATTATTA-
rJMSF020B14+ TAAACTGATATAAGCTCCCATCTCATTTTTGTTATTGTCAGATAGTAACATTATTATTA-
rJMSF028K16+ TAAACTGATATAAGCTCCCATCTCATTTTTGTTATTGTCAGATAGTAACATTATTATTA-
rJMSF048K14+ TAAACTGATATAAGCTCCCATCTCATTTTTGTTATTGTCAGATAGTAACATTATTATTA-
rJMSF017L13+ TAAACTGATATAAGCTCCCATCTCATTTTTGTTATTGTCAGATAGTAACATTATTATTA-
JMFS068A12+ TAAACTGATATAAGCTCCCATCTCATTTTTGTTATTGTCAGATAGTAACATTATTATTA-
____________________________________________________________
consensus TAAACTGATATAAGCTCCCATCTCATTTTTGTTATTGTCAGATAGTAACATTATTATTA-
. : . : . : . : . : . :
rJMSF052H02+ CTTAGTTGTAGTAATATAGGTAAATCTCAAGTA
rJMSF027D16+ CTTAGTTGTAGTA--ATAGGTAAATCTCAAGTACTGACAACGATTT
rJMSF040P17+ CTTAGTTGTAGTAATATAGGTAAATCTCAAGTACTGACAACGATTT
rJMSF020B14+ CTTAGTTGTAGTAATATAGGTAAATCTCAAGTACTGACAACGATTT
rJMSF028K16+ CTTAGTTATAGTAATATAGGTAAATCTCAAGTACTGACAACGATTT
rJMSF048K14+ CTTAGTTGTAGTAATATAGGTAAATCTCAAGTACTGACAACGATTT
rJMSF017L13+ CTTAGTTGTAGTAATATAGGTAAATCTCAAGTACTGACAACGATTT
JMFS068A12+ CTTAGTTGTAGTAATATAGGTAAATCTCCAGTACTGACAACGATTTTGAGGTGTAAAATG
____________________________________________________________
consensus CTTAGTTGTAGTAATATAGGTAAATCTCAAGTACTGACAACGATTTTGAGGTGTAAAATG
. : . : . : . : . : . :
JMFS068A12+ GTATTTACATATGAAGGCTCTTATATTCCGCAAAAAAAAAAAAAAAAAAACTCGAGACTA
____________________________________________________________
consensus GTATTTACATATGAAGGCTCTTATATTCCGCAAAAAAAAAAAAAAAAAAACTCGAGACTA