Contig 013114:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS055D03Sequence627013114 (3)
JMSF028I15Sequence469013114 (3)121007136 (5)
JMSF051L05Sequence600013114 (3)745022678emb|CDP02332.1|5e-15unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF051L05+                                                                 TTTGAG
                      ____________________________________________________________
consensus                                                                   TTTGAG
 
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JMSF051L05+           ACGACACGCGCCTTACGGGCCCAATGAAGTACCTATGAAGTACTTCATTCTTGCTCTCTT
                      ____________________________________________________________
consensus             ACGACACGCGCCTTACGGGCCCAATGAAGTACCTATGAAGTACTTCATTCTTGCTCTCTT
 
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JMSF028I15+                                                                   TGAT
JMSF051L05+           GTTCATCATCATCCTCACTCTCTGTTTCATAATGGAAAATTTTTTTGGCATAGAGTTGAT
                      ____________________________________________________________
consensus             GTTCATCATCATCCTCACTCTCTGTTTCATAATGGAAAATTTTTTTGGCATAGAGTTGAT
 
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JMSF028I15+           GCTGTGTGCAAAAGGATTTGACCCTTTTCTTTATATGAGCCGGCATGCCTGATACCGGCA
JMSF051L05+           GCTGCGTGCAAAAGGATTTGACCCTTTTGTTTATATGAGGCGGCATGCTTGATACCGGCA
                      ____________________________________________________________
consensus             GCTGTGTGCAAAAGGATTTGACCCTTTTGTTTATATGAGGCGGCATGCTTGATACCGGCA
 
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JMSF028I15+           GCATGAAGTGCTTGGGTAGGATACGCAACATAGAATTGAAATCCATAGTTTTCA---TGT
JMSF051L05+           GCGTGAAGTGCTTCCCTATGATCTCCATCACAGAATTGAAATCCATAGTTTCCAAGCCGC
                      ____________________________________________________________
consensus             GCGTGAAGTGCTTGGGTATGATCTGCATCATAGAATTGAAATCCATAGTTTTCAAGCTGT
 
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JMSF028I15+           CTTTAATTGCTCGATTCAAGATTGGGAGAAGCTTCTGAGCAGAGTGAAGTCTAACCTTCA
JMSF051L05+           CTTTAATTGCTCGATTCAATAACGGAAGAAGCTTTTTAGCAGAGTGAAGCCTAAGCTTCA
                      ____________________________________________________________
consensus             CTTTAATTGCTCGATTCAATATTGGGAGAAGCTTTTTAGCAGAGTGAAGTCTAAGCTTCA
 
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JMSF028I15+           TGGATTTCCCTAGATAAAACAATGTCAAATAGTGTTCAATTTGGAACCTTAGTTCAACGC
JMSF051L05+           TGGATTTCCCCAGGTAAAACAATCTCAATTGGTGTTCCATTTGGAACCTTAGTTCAACCG
                      ____________________________________________________________
consensus             TGGATTTCCCTAGGTAAAACAATGTCAATTGGTGTTCCATTTGGAACCTTAGTTCAACGG
 
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JMSF028I15+           AGGCATCTCTCAGTTGTGCTTCCAAACCTTTGAT                          
JMSF051L05+           AGACATATCCCACTTGTGCTTCCAAAGCTTTGATAGCTTCATCACAGTCCCCCACTTTGA
                      ____________________________________________________________
consensus             AGGCATCTCTCAGTTGTGCTTCCAAAGCTTTGATAGCTTCATCACAGTCCCCCACTTTGA
 
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JMSF051L05+           AATCTTGTTGAAGAGAGGTTTGCAAAGAAGAAAGATTTTTGTAAAGTAATCTGACCTTTG
JMFS055D03+                                                                 CCTTTG
                      ____________________________________________________________
consensus             AATCTTGTTGAAGAGAGGTTTGCAAAGAAGAAAGATTTTTGTAAAGTAATCTGACCTTTG
 
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JMSF051L05+           TTTTGTTGCGAAGAGGGAAACGAGGAGTGGGTTGGAGGAAGTGTTGATGGAG        
JMFS055D03+           TTTTGTTGCGAAGAGGGAAACGAGGATTGGGTTGGAGGAAGTGTTGGTGGAGTGTATCCA
                      ____________________________________________________________
consensus             TTTTGTTGCGAAGAGGGAAACGAGGATTGGGTTGGAGGAAGTGTTGGTGGAGTGTATCCA
 
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JMFS055D03+           TTAAAATTGTTACAGCAGCAAAAGCCATAGCCGGTGATGTGATGTGATGTTGTAGAGAGA
                      ____________________________________________________________
consensus             TTAAAATTGTTACAGCAGCAAAAGCCATAGCCGGTGATGTGATGTGATGTTGTAGAGAGA
 
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JMFS055D03+           AAGAGCAGGAACGAATGAAGTTGAAAGAAATAACTCTGCAGATGAAAGGATGGGATTGAA
                      ____________________________________________________________
consensus             AAGAGCAGGAACGAATGAAGTTGAAAGAAATAACTCTGCAGATGAAAGGATGGGATTGAA
 
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JMFS055D03+           AATAAGGACTCAATTTTTGCAGAGTAGAATTTGCAAAATAAGAATACCATGGAAAATCTT
                      ____________________________________________________________
consensus             AATAAGGACTCAATTTTTGCAGAGTAGAATTTGCAAAATAAGAATACCATGGAAAATCTT
 
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JMFS055D03+           TCTAGTTCTCAATAACAATATTTTGAATAGTTAATTCCCAAAATGTCCTCCGATTATGAC
                      ____________________________________________________________
consensus             TCTAGTTCTCAATAACAATATTTTGAATAGTTAATTCCCAAAATGTCCTCCGATTATGAC
 
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JMFS055D03+           CTTTTTTCAAATTGGTTCCTTGGCTTTTAATTGCATCTAAAGTGGTCCTCCGACTATTGA
                      ____________________________________________________________
consensus             CTTTTTTCAAATTGGTTCCTTGGCTTTTAATTGCATCTAAAGTGGTCCTCCGACTATTGA
 
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JMFS055D03+           ATTTTAAGCCAAAATGGTCTTCCGTTAGTTTTGGTGTTAAGTGGGTGTTAAAATGAGGGA
                      ____________________________________________________________
consensus             ATTTTAAGCCAAAATGGTCTTCCGTTAGTTTTGGTGTTAAGTGGGTGTTAAAATGAGGGA
 
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JMFS055D03+           TAAAAATTGGTGTCTATTACAAAAATATAATATTGGTTTATAGGGGCAGAACCAAAAATG
                      ____________________________________________________________
consensus             TAAAAATTGGTGTCTATTACAAAAATATAATATTGGTTTATAGGGGCAGAACCAAAAATG
 
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JMFS055D03+           TTTGTCAGTGGAGGCGGAAAAAGAATTTCAAAACGTGATAAAAGAATATTTATAATAAAA
                      ____________________________________________________________
consensus             TTTGTCAGTGGAGGCGGAAAAAGAATTTCAAAACGTGATAAAAGAATATTTATAATAAAA
 
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JMFS055D03+           TATGAAATGCATGGTCGGAATAAATTGTATATCATCGCTATTAATATTACATTCATAAAT
                      ____________________________________________________________
consensus             TATGAAATGCATGGTCGGAATAAATTGTATATCATCGCTATTAATATTACATTCATAAAT