Contig 013112:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047P07Sequence612013112 (5)emb|CAN74575.1|4e-41hypothetical protein VITISV_000297 [Vitis vinifera]610002712 (2)gb|KJB34632.1|6e-21hypothetical protein B456_006G076100 [Gossypium raimondii]
JMFS015F01Sequence591013112 (5)emb|CAN74575.1|5e-59hypothetical protein VITISV_000297 [Vitis vinifera]
JMFS053B08Sequence611013112 (5)emb|CAN74575.1|2e-40hypothetical protein VITISV_000297 [Vitis vinifera]
JMFS097D08Sequence606013112 (5)emb|CAN74575.1|1e-41hypothetical protein VITISV_000297 [Vitis vinifera]
JMFS110A06Sequence615013112 (5)emb|CAN74575.1|7e-48hypothetical protein VITISV_000297 [Vitis vinifera]

Alignment

This contig is upended


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JMFS015F01+                      TCCAAAAGTCCAGCTCCANAATCACCCCTGAACTCTGNAGAATAAAAAC
JMFS110A06+                                           TCACCCCTGAACTCTGGAGAATAAAANC
                      ____________________________________________________________
consensus                        TCCAAAAGTCCAGCTCCANAATCACCCCTGAACTCTGGAGAATAAAAAC
 
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JMFS015F01+           CATCTGACACTGCAATAGCACCTGAACTTTGGGCAGTTGGAGTATATGGCTCAGACCCAG
JMFS097D08+                    CTGCAATAGCACCTGAACTTTGGGCAGTTGGAGTATATGGCTCAGACCCAG
JMFS110A06+           CATCTGACACTGCAATAGCACCTGAACTTTGGGCAGTTGGAGTATATGGCTCAGACCCAG
JMFF047P07+                               CCTGAACTTTGGGCAGTTGGAGTATATGGCTCAGACCCAG
JMFS053B08+                                                            CTCAGACCCAG
                      ____________________________________________________________
consensus             CATCTGACACTGCAATAGCACCTGAACTTTGGGCAGTTGGAGTATATGGCTCAGACCCAG
 
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JMFS015F01+           ATTCACCATTAAAATTGAGGTTTCTCATTAATTTGAGAAGTCTCTGTTTCTCTTCTACAG
JMFS097D08+           ATTCACCATTAAAATTGAGGTTTCTCATTAATNTGAGAAGTCTCTGTTTCTCTTCTACAG
JMFS110A06+           ATTCACCATTAAAATTGAGGTTTCTCATTAATNTGAGAAGTCTCTGTTTCTCTTCTACAG
JMFF047P07+           ATTCACCATTAAAATTGAGGTTTCTCATTAATNTGAGAAGTCTCTGTTTCTCTTCTACAG
JMFS053B08+           ATTCACCATTAAAATTGAGGTTTCTCATTAATTTGAGAAGTCTCTGTTTCTCTTCTACAG
                      ____________________________________________________________
consensus             ATTCACCATTAAAATTGAGGTTTCTCATTAATTTGAGAAGTCTCTGTTTCTCTTCTACAG
 
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JMFS015F01+           ATTGTGCTCCATATCCCTGCATAAGAAGGTTAGGTAGCAGCCGGTGGTCGACACCAGTGG
JMFS097D08+           ATTGTGCTCCATATCCCTGCATAAGAAGGTTAGGTAGCAGCCGGTGGTCGACACCAGTGG
JMFS110A06+           ATTGTGCTCCATATCCCTGCATAAGAAGGTTAGGTAGCAGCCGGTGGTCGACACCAGTGG
JMFF047P07+           ATTGTGCTCCATATCCCTGCATAAGAAGGTTAGGTAGCAGCCGGTGGTCGACACCAGTGG
JMFS053B08+           ATTGTGCTCCATATCCCTGCATAAGAAGGTTAGGTAGCAGCCGGTGGTCGACACCAGTGG
                      ____________________________________________________________
consensus             ATTGTGCTCCATATCCCTGCATAAGAAGGTTAGGTAGCAGCCGGTGGTCGACACCAGTGG
 
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JMFS015F01+           ACGCCAAGGGAGAGGCCAGATGCTGCAAGCCGGCGGACTGAAGCCACCGCGCCATGACGG
JMFS097D08+           ACGCCAAGGGAGAGGCCAGATGCTGCAAGCCGGCGGACTGAAGCCACCGCGCCATGACGG
JMFS110A06+           ACGCCAAGGGAGAGGCCAGATGCTGCAAGCCGGCGGACTGAAGCCACCGCGCCATGACGG
JMFF047P07+           ACGCCAAGGGAGAGGCCAGATGCTGCAAGCCGGCGGACTGAAGCCACCGCGCCATGACGG
JMFS053B08+           ACGCCAAGGGAGAGGCCAGATGCTGCAAGCCGGCGGACTGAAGCCACCGCGCCATGACGG
                      ____________________________________________________________
consensus             ACGCCAAGGGAGAGGCCAGATGCTGCAAGCCGGCGGACTGAAGCCACCGCGCCATGACGG
 
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JMFS015F01+           CGTCCCCTGCATCACCGGCATGGCCAGCATTGCCGGGGTGATCGTACAGAGCTGTCGCTG
JMFS097D08+           CGTCCCCTGCATCACCGGCATGGCCAGCATTGCCGGGGTGATCGTACAGAGCTGTCGCTG
JMFS110A06+           CGTCCCCTGCATCACCGGCATGGCCAGCATTGCCGGGGTGATCGTACAGAGCTGTCGCTG
JMFF047P07+           CGTCCCCTGCATCACCGGCATGGCCAGCATTGCCGGGGTGATCGTGCAGAGCTGTCGCTG
JMFS053B08+           CGTCCCCTGCATCACCGGCATGGCCAGCATTGCCGGGGTGATCGTACAGAGCTGTCGCTG
                      ____________________________________________________________
consensus             CGTCCCCTGCATCACCGGCATGGCCAGCATTGCCGGGGTGATCGTACAGAGCTGTCGCTG
 
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JMFS015F01+           CGGCACTGCTTTGCTGCATCTGGCCACCCATGTGGCGCTGAGACCGACGTTGCGGAGCCA
JMFS097D08+           CGGCACTGCTTTGCTGCATCTGGCCACCCATGTGGCGCTGAGACCGACGTTGCGGAGCCA
JMFS110A06+           CGGCACTGCTTTGCTGCATCTGGCCACCCATGTGGCGCTGAGACCGACGTTGCGGAGCCA
JMFF047P07+           CGGCACTGCTTTGCTGCATCTGGCCACCCATGTGGCGCTGAGACCGACGTTGCGGAGCCA
JMFS053B08+           CGGCACTGCTTTGNTGCATCTGGCCACCCATGTGGCGCTGAGACCGACGTTGCGGAGCCA
                      ____________________________________________________________
consensus             CGGCACTGCTTTGCTGCATCTGGCCACCCATGTGGCGCTGAGACCGACGTTGCGGAGCCA
 
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JMFS015F01+           ATTTCAATATTTGCAATTCAAAGTGGAAGAAAAATCAAAATGGAAGGCGCACATTCAAGC
JMFS097D08+           ATTTCAA                                                     
JMFS110A06+           ATTTCAATATTTGCAATTCAAAGTGGAAGAAAAATCAAAATGGAAGGCGCACATTCAAGC
JMFF047P07+           ATTTCAATATTTGCAATTCAAAGTGGAAGAAAAATCAAAATGGAAGGCGCACATTCAAGC
JMFS053B08+           ATTTCAATATTTGCAATTCAAAGTGGAAGAAAAATCAAAATGGAAGGCGCACATTCAAGC
                      ____________________________________________________________
consensus             ATTTCAATATTTGCAATTCAAAGTGGAAGAAAAATCAAAATGGAAGGCGCACATTCAAGC
 
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JMFS015F01+           GTTGGCACCCGGTAACCAATTCAACTCGACCGAATCCAGAAAATCAACACAAATTGCTGG
JMFS110A06+           GTTGGCACCCGGTAACCAATTCAACTCGACCGAATCCAGAAAATCAACACAAATTGCTGG
JMFF047P07+           GTTGGCACCCGGTAACCAATTCAACTCGACCGAATCCAGAAAATCAACACAAATTGCTGG
JMFS053B08+           GTTGGCACCCGGTAACCAATTCAACTCGACCGAATCCAGAAAATCAACACAAATTGCTGG
                      ____________________________________________________________
consensus             GTTGGCACCCGGTAACCAATTCAACTCGACCGAATCCAGAAAATCAACACAAATTGCTGG
 
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JMFS015F01+           CGTAATCCCCGAAATGCACCGACCGTCCTTCAAACCATACCAATGCAGAATCGAATTGAA
JMFS110A06+           CGTAATCCCCGAAATGCACCGACCGTCCTTCAAACCATACCAATGCAGAATCGAATTGAA
JMFF047P07+           CGTAATCCCCGAAATGCACCGACCGTCCTTCAAACCATACCAATGCAGAATCGAATTGAA
JMFS053B08+           CGTAATCCCCGAAATGCACCGACCGTCCTTCAAACCATACCAATGCAGAATCGAATTGAA
                      ____________________________________________________________
consensus             CGTAATCCCCGAAATGCACCGACCGTCCTTCAAACCATACCAATGCAGAATCGAATTGAA
 
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JMFS015F01+           GA                                                          
JMFS110A06+           GAGTTTTGAAGGCCGGAAATAGATCTGAGAGAGAAGAAGAGGAAAGC             
JMFF047P07+           GAGTTTTGAAGGCCGGAAATAGATCTGAGAGAGAAGAAGAGGAAAGCAAAAACCCTAATC
JMFS053B08+           GAGTTTTGAAGGCCGGAAATAGATCTGAGAGAGAAGAAGAGGAAAGCAAAAACCCTAATC
                      ____________________________________________________________
consensus             GAGTTTTGAAGGCCGGAAATAGATCTGAGAGAGAAGAAGAGGAAAGCAAAAACCCTAATC
 
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JMFF047P07+           TTTTATT                                                     
JMFS053B08+           TTTTATTAGATATTATAGAAGAAAGGTTGAAAAATATATATAGGAATTGCTGGAAGTGAA
                      ____________________________________________________________
consensus             TTTTATTAGATATTATAGAAGAAAGGTTGAAAAATATATATAGGAATTGCTGGAAGTGAA