Contig 013112:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047P07Sequence612013112 (5)emb|CAN74575.1|4e-41hypothetical protein VITISV_000297 [Vitis vinifera]610002712 (2)gb|KJB34632.1|6e-21hypothetical protein B456_006G076100 [Gossypium raimondii]
JMFS015F01Sequence591013112 (5)emb|CAN74575.1|5e-59hypothetical protein VITISV_000297 [Vitis vinifera]
JMFS053B08Sequence611013112 (5)emb|CAN74575.1|2e-40hypothetical protein VITISV_000297 [Vitis vinifera]
JMFS097D08Sequence606013112 (5)emb|CAN74575.1|1e-41hypothetical protein VITISV_000297 [Vitis vinifera]
JMFS110A06Sequence615013112 (5)emb|CAN74575.1|7e-48hypothetical protein VITISV_000297 [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS015F01+ TCCAAAAGTCCAGCTCCANAATCACCCCTGAACTCTGNAGAATAAAAAC
JMFS110A06+ TCACCCCTGAACTCTGGAGAATAAAANC
                      ____________________________________________________________
consensus TCCAAAAGTCCAGCTCCANAATCACCCCTGAACTCTGGAGAATAAAAAC
 
. : . : . : . : . : . :
JMFS015F01+ CATCTGACACTGCAATAGCACCTGAACTTTGGGCAGTTGGAGTATATGGCTCAGACCCAG
JMFS097D08+ CTGCAATAGCACCTGAACTTTGGGCAGTTGGAGTATATGGCTCAGACCCAG
JMFS110A06+ CATCTGACACTGCAATAGCACCTGAACTTTGGGCAGTTGGAGTATATGGCTCAGACCCAG
JMFF047P07+ CCTGAACTTTGGGCAGTTGGAGTATATGGCTCAGACCCAG
JMFS053B08+ CTCAGACCCAG
                      ____________________________________________________________
consensus CATCTGACACTGCAATAGCACCTGAACTTTGGGCAGTTGGAGTATATGGCTCAGACCCAG
 
. : . : . : . : . : . :
JMFS015F01+ ATTCACCATTAAAATTGAGGTTTCTCATTAATTTGAGAAGTCTCTGTTTCTCTTCTACAG
JMFS097D08+ ATTCACCATTAAAATTGAGGTTTCTCATTAATNTGAGAAGTCTCTGTTTCTCTTCTACAG
JMFS110A06+ ATTCACCATTAAAATTGAGGTTTCTCATTAATNTGAGAAGTCTCTGTTTCTCTTCTACAG
JMFF047P07+ ATTCACCATTAAAATTGAGGTTTCTCATTAATNTGAGAAGTCTCTGTTTCTCTTCTACAG
JMFS053B08+ ATTCACCATTAAAATTGAGGTTTCTCATTAATTTGAGAAGTCTCTGTTTCTCTTCTACAG
                      ____________________________________________________________
consensus ATTCACCATTAAAATTGAGGTTTCTCATTAATTTGAGAAGTCTCTGTTTCTCTTCTACAG
 
. : . : . : . : . : . :
JMFS015F01+ ATTGTGCTCCATATCCCTGCATAAGAAGGTTAGGTAGCAGCCGGTGGTCGACACCAGTGG
JMFS097D08+ ATTGTGCTCCATATCCCTGCATAAGAAGGTTAGGTAGCAGCCGGTGGTCGACACCAGTGG
JMFS110A06+ ATTGTGCTCCATATCCCTGCATAAGAAGGTTAGGTAGCAGCCGGTGGTCGACACCAGTGG
JMFF047P07+ ATTGTGCTCCATATCCCTGCATAAGAAGGTTAGGTAGCAGCCGGTGGTCGACACCAGTGG
JMFS053B08+ ATTGTGCTCCATATCCCTGCATAAGAAGGTTAGGTAGCAGCCGGTGGTCGACACCAGTGG
                      ____________________________________________________________
consensus ATTGTGCTCCATATCCCTGCATAAGAAGGTTAGGTAGCAGCCGGTGGTCGACACCAGTGG
 
. : . : . : . : . : . :
JMFS015F01+ ACGCCAAGGGAGAGGCCAGATGCTGCAAGCCGGCGGACTGAAGCCACCGCGCCATGACGG
JMFS097D08+ ACGCCAAGGGAGAGGCCAGATGCTGCAAGCCGGCGGACTGAAGCCACCGCGCCATGACGG
JMFS110A06+ ACGCCAAGGGAGAGGCCAGATGCTGCAAGCCGGCGGACTGAAGCCACCGCGCCATGACGG
JMFF047P07+ ACGCCAAGGGAGAGGCCAGATGCTGCAAGCCGGCGGACTGAAGCCACCGCGCCATGACGG
JMFS053B08+ ACGCCAAGGGAGAGGCCAGATGCTGCAAGCCGGCGGACTGAAGCCACCGCGCCATGACGG
                      ____________________________________________________________
consensus ACGCCAAGGGAGAGGCCAGATGCTGCAAGCCGGCGGACTGAAGCCACCGCGCCATGACGG
 
. : . : . : . : . : . :
JMFS015F01+ CGTCCCCTGCATCACCGGCATGGCCAGCATTGCCGGGGTGATCGTACAGAGCTGTCGCTG
JMFS097D08+ CGTCCCCTGCATCACCGGCATGGCCAGCATTGCCGGGGTGATCGTACAGAGCTGTCGCTG
JMFS110A06+ CGTCCCCTGCATCACCGGCATGGCCAGCATTGCCGGGGTGATCGTACAGAGCTGTCGCTG
JMFF047P07+ CGTCCCCTGCATCACCGGCATGGCCAGCATTGCCGGGGTGATCGTGCAGAGCTGTCGCTG
JMFS053B08+ CGTCCCCTGCATCACCGGCATGGCCAGCATTGCCGGGGTGATCGTACAGAGCTGTCGCTG
                      ____________________________________________________________
consensus CGTCCCCTGCATCACCGGCATGGCCAGCATTGCCGGGGTGATCGTACAGAGCTGTCGCTG
 
. : . : . : . : . : . :
JMFS015F01+ CGGCACTGCTTTGCTGCATCTGGCCACCCATGTGGCGCTGAGACCGACGTTGCGGAGCCA
JMFS097D08+ CGGCACTGCTTTGCTGCATCTGGCCACCCATGTGGCGCTGAGACCGACGTTGCGGAGCCA
JMFS110A06+ CGGCACTGCTTTGCTGCATCTGGCCACCCATGTGGCGCTGAGACCGACGTTGCGGAGCCA
JMFF047P07+ CGGCACTGCTTTGCTGCATCTGGCCACCCATGTGGCGCTGAGACCGACGTTGCGGAGCCA
JMFS053B08+ CGGCACTGCTTTGNTGCATCTGGCCACCCATGTGGCGCTGAGACCGACGTTGCGGAGCCA
                      ____________________________________________________________
consensus CGGCACTGCTTTGCTGCATCTGGCCACCCATGTGGCGCTGAGACCGACGTTGCGGAGCCA
 
. : . : . : . : . : . :
JMFS015F01+ ATTTCAATATTTGCAATTCAAAGTGGAAGAAAAATCAAAATGGAAGGCGCACATTCAAGC
JMFS097D08+ ATTTCAA
JMFS110A06+ ATTTCAATATTTGCAATTCAAAGTGGAAGAAAAATCAAAATGGAAGGCGCACATTCAAGC
JMFF047P07+ ATTTCAATATTTGCAATTCAAAGTGGAAGAAAAATCAAAATGGAAGGCGCACATTCAAGC
JMFS053B08+ ATTTCAATATTTGCAATTCAAAGTGGAAGAAAAATCAAAATGGAAGGCGCACATTCAAGC
                      ____________________________________________________________
consensus ATTTCAATATTTGCAATTCAAAGTGGAAGAAAAATCAAAATGGAAGGCGCACATTCAAGC
 
. : . : . : . : . : . :
JMFS015F01+ GTTGGCACCCGGTAACCAATTCAACTCGACCGAATCCAGAAAATCAACACAAATTGCTGG
JMFS110A06+ GTTGGCACCCGGTAACCAATTCAACTCGACCGAATCCAGAAAATCAACACAAATTGCTGG
JMFF047P07+ GTTGGCACCCGGTAACCAATTCAACTCGACCGAATCCAGAAAATCAACACAAATTGCTGG
JMFS053B08+ GTTGGCACCCGGTAACCAATTCAACTCGACCGAATCCAGAAAATCAACACAAATTGCTGG
                      ____________________________________________________________
consensus GTTGGCACCCGGTAACCAATTCAACTCGACCGAATCCAGAAAATCAACACAAATTGCTGG
 
. : . : . : . : . : . :
JMFS015F01+ CGTAATCCCCGAAATGCACCGACCGTCCTTCAAACCATACCAATGCAGAATCGAATTGAA
JMFS110A06+ CGTAATCCCCGAAATGCACCGACCGTCCTTCAAACCATACCAATGCAGAATCGAATTGAA
JMFF047P07+ CGTAATCCCCGAAATGCACCGACCGTCCTTCAAACCATACCAATGCAGAATCGAATTGAA
JMFS053B08+ CGTAATCCCCGAAATGCACCGACCGTCCTTCAAACCATACCAATGCAGAATCGAATTGAA
                      ____________________________________________________________
consensus CGTAATCCCCGAAATGCACCGACCGTCCTTCAAACCATACCAATGCAGAATCGAATTGAA
 
. : . : . : . : . : . :
JMFS015F01+ GA
JMFS110A06+ GAGTTTTGAAGGCCGGAAATAGATCTGAGAGAGAAGAAGAGGAAAGC
JMFF047P07+ GAGTTTTGAAGGCCGGAAATAGATCTGAGAGAGAAGAAGAGGAAAGCAAAAACCCTAATC
JMFS053B08+ GAGTTTTGAAGGCCGGAAATAGATCTGAGAGAGAAGAAGAGGAAAGCAAAAACCCTAATC
                      ____________________________________________________________
consensus GAGTTTTGAAGGCCGGAAATAGATCTGAGAGAGAAGAAGAGGAAAGCAAAAACCCTAATC
 
. : . : . : . : . : . :
JMFF047P07+ TTTTATT
JMFS053B08+ TTTTATTAGATATTATAGAAGAAAGGTTGAAAAATATATATAGGAATTGCTGGAAGTGAA
                      ____________________________________________________________
consensus TTTTATTAGATATTATAGAAGAAAGGTTGAAAAATATATATAGGAATTGCTGGAAGTGAA