clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF047P07 | Sequence | 612 | 013112 (5) | emb|CAN74575.1| | 4e-41 | hypothetical protein VITISV_000297 [Vitis vinifera] | 610 | 002712 (2) | gb|KJB34632.1| | 6e-21 | hypothetical protein B456_006G076100 [Gossypium raimondii] |
JMFS015F01 | Sequence | 591 | 013112 (5) | emb|CAN74575.1| | 5e-59 | hypothetical protein VITISV_000297 [Vitis vinifera] | |||||
JMFS053B08 | Sequence | 611 | 013112 (5) | emb|CAN74575.1| | 2e-40 | hypothetical protein VITISV_000297 [Vitis vinifera] | |||||
JMFS097D08 | Sequence | 606 | 013112 (5) | emb|CAN74575.1| | 1e-41 | hypothetical protein VITISV_000297 [Vitis vinifera] | |||||
JMFS110A06 | Sequence | 615 | 013112 (5) | emb|CAN74575.1| | 7e-48 | hypothetical protein VITISV_000297 [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
JMFS015F01+ TCCAAAAGTCCAGCTCCANAATCACCCCTGAACTCTGNAGAATAAAAAC
JMFS110A06+ TCACCCCTGAACTCTGGAGAATAAAANC
____________________________________________________________
consensus TCCAAAAGTCCAGCTCCANAATCACCCCTGAACTCTGGAGAATAAAAAC
. : . : . : . : . : . :
JMFS015F01+ CATCTGACACTGCAATAGCACCTGAACTTTGGGCAGTTGGAGTATATGGCTCAGACCCAG
JMFS097D08+ CTGCAATAGCACCTGAACTTTGGGCAGTTGGAGTATATGGCTCAGACCCAG
JMFS110A06+ CATCTGACACTGCAATAGCACCTGAACTTTGGGCAGTTGGAGTATATGGCTCAGACCCAG
JMFF047P07+ CCTGAACTTTGGGCAGTTGGAGTATATGGCTCAGACCCAG
JMFS053B08+ CTCAGACCCAG
____________________________________________________________
consensus CATCTGACACTGCAATAGCACCTGAACTTTGGGCAGTTGGAGTATATGGCTCAGACCCAG
. : . : . : . : . : . :
JMFS015F01+ ATTCACCATTAAAATTGAGGTTTCTCATTAATTTGAGAAGTCTCTGTTTCTCTTCTACAG
JMFS097D08+ ATTCACCATTAAAATTGAGGTTTCTCATTAATNTGAGAAGTCTCTGTTTCTCTTCTACAG
JMFS110A06+ ATTCACCATTAAAATTGAGGTTTCTCATTAATNTGAGAAGTCTCTGTTTCTCTTCTACAG
JMFF047P07+ ATTCACCATTAAAATTGAGGTTTCTCATTAATNTGAGAAGTCTCTGTTTCTCTTCTACAG
JMFS053B08+ ATTCACCATTAAAATTGAGGTTTCTCATTAATTTGAGAAGTCTCTGTTTCTCTTCTACAG
____________________________________________________________
consensus ATTCACCATTAAAATTGAGGTTTCTCATTAATTTGAGAAGTCTCTGTTTCTCTTCTACAG
. : . : . : . : . : . :
JMFS015F01+ ATTGTGCTCCATATCCCTGCATAAGAAGGTTAGGTAGCAGCCGGTGGTCGACACCAGTGG
JMFS097D08+ ATTGTGCTCCATATCCCTGCATAAGAAGGTTAGGTAGCAGCCGGTGGTCGACACCAGTGG
JMFS110A06+ ATTGTGCTCCATATCCCTGCATAAGAAGGTTAGGTAGCAGCCGGTGGTCGACACCAGTGG
JMFF047P07+ ATTGTGCTCCATATCCCTGCATAAGAAGGTTAGGTAGCAGCCGGTGGTCGACACCAGTGG
JMFS053B08+ ATTGTGCTCCATATCCCTGCATAAGAAGGTTAGGTAGCAGCCGGTGGTCGACACCAGTGG
____________________________________________________________
consensus ATTGTGCTCCATATCCCTGCATAAGAAGGTTAGGTAGCAGCCGGTGGTCGACACCAGTGG
. : . : . : . : . : . :
JMFS015F01+ ACGCCAAGGGAGAGGCCAGATGCTGCAAGCCGGCGGACTGAAGCCACCGCGCCATGACGG
JMFS097D08+ ACGCCAAGGGAGAGGCCAGATGCTGCAAGCCGGCGGACTGAAGCCACCGCGCCATGACGG
JMFS110A06+ ACGCCAAGGGAGAGGCCAGATGCTGCAAGCCGGCGGACTGAAGCCACCGCGCCATGACGG
JMFF047P07+ ACGCCAAGGGAGAGGCCAGATGCTGCAAGCCGGCGGACTGAAGCCACCGCGCCATGACGG
JMFS053B08+ ACGCCAAGGGAGAGGCCAGATGCTGCAAGCCGGCGGACTGAAGCCACCGCGCCATGACGG
____________________________________________________________
consensus ACGCCAAGGGAGAGGCCAGATGCTGCAAGCCGGCGGACTGAAGCCACCGCGCCATGACGG
. : . : . : . : . : . :
JMFS015F01+ CGTCCCCTGCATCACCGGCATGGCCAGCATTGCCGGGGTGATCGTACAGAGCTGTCGCTG
JMFS097D08+ CGTCCCCTGCATCACCGGCATGGCCAGCATTGCCGGGGTGATCGTACAGAGCTGTCGCTG
JMFS110A06+ CGTCCCCTGCATCACCGGCATGGCCAGCATTGCCGGGGTGATCGTACAGAGCTGTCGCTG
JMFF047P07+ CGTCCCCTGCATCACCGGCATGGCCAGCATTGCCGGGGTGATCGTGCAGAGCTGTCGCTG
JMFS053B08+ CGTCCCCTGCATCACCGGCATGGCCAGCATTGCCGGGGTGATCGTACAGAGCTGTCGCTG
____________________________________________________________
consensus CGTCCCCTGCATCACCGGCATGGCCAGCATTGCCGGGGTGATCGTACAGAGCTGTCGCTG
. : . : . : . : . : . :
JMFS015F01+ CGGCACTGCTTTGCTGCATCTGGCCACCCATGTGGCGCTGAGACCGACGTTGCGGAGCCA
JMFS097D08+ CGGCACTGCTTTGCTGCATCTGGCCACCCATGTGGCGCTGAGACCGACGTTGCGGAGCCA
JMFS110A06+ CGGCACTGCTTTGCTGCATCTGGCCACCCATGTGGCGCTGAGACCGACGTTGCGGAGCCA
JMFF047P07+ CGGCACTGCTTTGCTGCATCTGGCCACCCATGTGGCGCTGAGACCGACGTTGCGGAGCCA
JMFS053B08+ CGGCACTGCTTTGNTGCATCTGGCCACCCATGTGGCGCTGAGACCGACGTTGCGGAGCCA
____________________________________________________________
consensus CGGCACTGCTTTGCTGCATCTGGCCACCCATGTGGCGCTGAGACCGACGTTGCGGAGCCA
. : . : . : . : . : . :
JMFS015F01+ ATTTCAATATTTGCAATTCAAAGTGGAAGAAAAATCAAAATGGAAGGCGCACATTCAAGC
JMFS097D08+ ATTTCAA
JMFS110A06+ ATTTCAATATTTGCAATTCAAAGTGGAAGAAAAATCAAAATGGAAGGCGCACATTCAAGC
JMFF047P07+ ATTTCAATATTTGCAATTCAAAGTGGAAGAAAAATCAAAATGGAAGGCGCACATTCAAGC
JMFS053B08+ ATTTCAATATTTGCAATTCAAAGTGGAAGAAAAATCAAAATGGAAGGCGCACATTCAAGC
____________________________________________________________
consensus ATTTCAATATTTGCAATTCAAAGTGGAAGAAAAATCAAAATGGAAGGCGCACATTCAAGC
. : . : . : . : . : . :
JMFS015F01+ GTTGGCACCCGGTAACCAATTCAACTCGACCGAATCCAGAAAATCAACACAAATTGCTGG
JMFS110A06+ GTTGGCACCCGGTAACCAATTCAACTCGACCGAATCCAGAAAATCAACACAAATTGCTGG
JMFF047P07+ GTTGGCACCCGGTAACCAATTCAACTCGACCGAATCCAGAAAATCAACACAAATTGCTGG
JMFS053B08+ GTTGGCACCCGGTAACCAATTCAACTCGACCGAATCCAGAAAATCAACACAAATTGCTGG
____________________________________________________________
consensus GTTGGCACCCGGTAACCAATTCAACTCGACCGAATCCAGAAAATCAACACAAATTGCTGG
. : . : . : . : . : . :
JMFS015F01+ CGTAATCCCCGAAATGCACCGACCGTCCTTCAAACCATACCAATGCAGAATCGAATTGAA
JMFS110A06+ CGTAATCCCCGAAATGCACCGACCGTCCTTCAAACCATACCAATGCAGAATCGAATTGAA
JMFF047P07+ CGTAATCCCCGAAATGCACCGACCGTCCTTCAAACCATACCAATGCAGAATCGAATTGAA
JMFS053B08+ CGTAATCCCCGAAATGCACCGACCGTCCTTCAAACCATACCAATGCAGAATCGAATTGAA
____________________________________________________________
consensus CGTAATCCCCGAAATGCACCGACCGTCCTTCAAACCATACCAATGCAGAATCGAATTGAA
. : . : . : . : . : . :
JMFS015F01+ GA
JMFS110A06+ GAGTTTTGAAGGCCGGAAATAGATCTGAGAGAGAAGAAGAGGAAAGC
JMFF047P07+ GAGTTTTGAAGGCCGGAAATAGATCTGAGAGAGAAGAAGAGGAAAGCAAAAACCCTAATC
JMFS053B08+ GAGTTTTGAAGGCCGGAAATAGATCTGAGAGAGAAGAAGAGGAAAGCAAAAACCCTAATC
____________________________________________________________
consensus GAGTTTTGAAGGCCGGAAATAGATCTGAGAGAGAAGAAGAGGAAAGCAAAAACCCTAATC
. : . : . : . : . : . :
JMFF047P07+ TTTTATT
JMFS053B08+ TTTTATTAGATATTATAGAAGAAAGGTTGAAAAATATATATAGGAATTGCTGGAAGTGAA
____________________________________________________________
consensus TTTTATTAGATATTATAGAAGAAAGGTTGAAAAATATATATAGGAATTGCTGGAAGTGAA