Contig 013110:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS047G04Sequence627013110 (2)ref|XP_009789184.1|218PREDICTED: uncharacterized protein LOC104236862 [Nicotiana sylvestris]
JMSF028O21Sequence585022144733013110 (2)ref|XP_009789184.1|256PREDICTED: uncharacterized protein LOC104236862 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF028O21-             ATTGTGTTGTAATGAAACTACATTGGTATATAAAATGAAACTACAGCATATACAAAA
                      ____________________________________________________________
consensus                ATTGTGTTGTAATGAAACTACATTGGTATATAAAATGAAACTACAGCATATACAAAA
 
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rJMSF028O21-          GCTTACACTGCCAGTCTAGTTTTCACTTGGTTCATTACTTTATAGATTAGTTAAGGAGAT
                      ____________________________________________________________
consensus             GCTTACACTGCCAGTCTAGTTTTCACTTGGTTCATTACTTTATAGATTAGTTAAGGAGAT
 
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rJMSF028O21-          GTGGGATCCATTTTTCAACAATGGCTGGAGAGCCATACCATGGCCTCGTGGTGTCATCGG
                      ____________________________________________________________
consensus             GTGGGATCCATTTTTCAACAATGGCTGGAGAGCCATACCATGGCCTCGTGGTGTCATCGG
 
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rJMSF028O21-          AACCGACAGGTGAGTGGTAAACTCCATCCAGAGTTATATTAAGAGCGCCTTCCAGGTGTG
                      ____________________________________________________________
consensus             AACCGACAGGTGAGTGGTAAACTCCATCCAGAGTTATATTAAGAGCGCCTTCCAGGTGTG
 
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rJMSF028O21-          CTGAGATTTCAGGCACAACTCCATCACCCCAAACATCAGCTTGCCCACAAACCTGTTTGT
                      ____________________________________________________________
consensus             CTGAGATTTCAGGCACAACTCCATCACCCCAAACATCAGCTTGCCCACAAACCTGTTTGT
 
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rJMSF028O21-          AGCCTTGACCAACAAATCGTGCTTGCAAAGTATTAGGTGTTGCAGTAGATGTGTCCATAC
                      ____________________________________________________________
consensus             AGCCTTGACCAACAAATCGTGCTTGCAAAGTATTAGGTGTTGCAGTAGATGTGTCCATAC
 
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rJMSF028O21-          TTCTTAGAGCAGCAGTATCAGGCAATGGCTGGTTAACATCAACCAAAACCGTGGAGCCAT
                      ____________________________________________________________
consensus             TTCTTAGAGCAGCAGTATCAGGCAATGGCTGGTTAACATCAACCAAAACCGTGGAGCCAT
 
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rJMSF028O21-          AATTTGTATCGGAGCCAAGGAAACGTTCGCCCTGAATGTACCTTCCTGCTACACATACGT
                      ____________________________________________________________
consensus             AATTTGTATCGGAGCCAAGGAAACGTTCGCCCTGAATGTACCTTCCTGCTACACATACGT
 
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rJMSF028O21-          ATCTAAGTTCTGGAGTATAAACAGCCTTTGCACAATGCTTTTCAACATAATCCAATAGGC
JMFS047G04+                                           CAATGCTTTTCAACATAATCCAATAGGC
                      ____________________________________________________________
consensus             ATCTAAGTTCTGGAGTATAAACAGCCTTTGCACAATGCTTTTCAACATAATCCAATAGGC
 
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rJMSF028O21-          CCCTTGTTTGGTCAATGACTCCCGGCAAGCCTTTAGGTGGTGGG                
JMFS047G04+           CCC-TGTTTGGTCAATGACTCCCGGCAAGCCTTTAGGTGGTGGGAGGTGAGGGGTCCCCA
                      ____________________________________________________________
consensus             CCCTTGTTTGGTCAATGACTCCCGGCAAGCCTTTAGGTGGTGGGAGGTGAGGGGTCCCCA
 
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JMFS047G04+           GAGTCAGTAACAGGGTGATGCCAGATAGCCCAAACTCTTGCATATAAACACGTGCTAGCC
                      ____________________________________________________________
consensus             GAGTCAGTAACAGGGTGATGCCAGATAGCCCAAACTCTTGCATATAAACACGTGCTAGCC
 
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JMFS047G04+           ATCCTCCTGCGGAATGGCCAATAAAGGATAAAGCCCCACTCCCACCTTGACCCAAATTCT
                      ____________________________________________________________
consensus             ATCCTCCTGCGGAATGGCCAATAAAGGATAAAGCCCCACTCCCACCTTGACCCAAATTCT
 
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JMFS047G04+           TTGCCTCACTGATAGCATCGTCAATTCTTTTGAAATACCAATCAAGAACGGGCCGAGGAC
                      ____________________________________________________________
consensus             TTGCCTCACTGATAGCATCGTCAATTCTTTTGAAATACCAATCAAGAACGGGCCGAGGAC
 
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JMFS047G04+           GGAGTGTTCCTCTCCAATAATTTGCATCTGCCAAACCTGCAGCATTCCTCAGCCAATCAA
                      ____________________________________________________________
consensus             GGAGTGTTCCTCTCCAATAATTTGCATCTGCCAAACCTGCAGCATTCCTCAGCCAATCAA
 
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JMFS047G04+           TTCTTGAAACCTTTGCAATCACTGATGGAATTCCATAGTCCTTTAATATGAGAGCCAATT
                      ____________________________________________________________
consensus             TTCTTGAAACCTTTGCAATCACTGATGGAATTCCATAGTCCTTTAATATGAGAGCCAATT
 
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JMFS047G04+           TCTGATAATCGTTGGAATTGTTTCCTAGTCCTGGAAGAATGACAGCAGGGCGATAAGTAG
                      ____________________________________________________________
consensus             TCTGATAATCGTTGGAATTGTTTCCTAGTCCTGGAAGAATGACAGCAGGGCGATAAGTAG
 
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JMFS047G04+           AGGAAGTGGTAGGCTGCGAGGAAGATCCATCTGCTTGGGAAATTGCAGAGCAGCGGCAAT
                      ____________________________________________________________
consensus             AGGAAGTGGTAGGCTGCGAGGAAGATCCATCTGCTTGGGAAATTGCAGAGCAGCGGCAAT
 
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JMFS047G04+           GGCGCCGTCCTAATGATTTGAACTTAGGCGATGGTGAAAATGTGGTGGGTGGCGACCATG
                      ____________________________________________________________
consensus             GGCGCCGTCCTAATGATTTGAACTTAGGCGATGGTGAAAATGTGGTGGGTGGCGACCATG
 
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JMFS047G04+           ACACAGCCATAGCCATCCTCTCCACACAGCCGTAGGAGTGACTGTGTGGTCTGTTAGTCG
                      ____________________________________________________________
consensus             ACACAGCCATAGCCATCCTCTCCACACAGCCGTAGGAGTGACTGTGTGGTCTGTTAGTCG