Contig 013109:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS047D06Sequence642013109 (2)ref|XP_009629784.1|6e-75PREDICTED: telomere repeat-binding protein 5-like [Nicotiana tomentosiformis] r
JMSF025P20Sequence624009354 (2)ref|XP_002313432.2|2e-14telomere-binding family protein [Populus trichocarpa] gb|EEE87387.2| telomere-bi740013109 (2)emb|CDP09072.1|3e-74unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF025P20-                                    TCAGCATTTACAATGCGCTAAGCCCTCACGCAGG
                      ____________________________________________________________
consensus                                       TCAGCATTTACAATGCGCTAAGCCCTCACGCAGG
 
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rJMSF025P20-          AGACAAATCACCACCTGAAGCTACACAATAATATCGCATGTACTAATTTACTTGCACCAT
                      ____________________________________________________________
consensus             AGACAAATCACCACCTGAAGCTACACAATAATATCGCATGTACTAATTTACTTGCACCAT
 
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rJMSF025P20-          TTCGTATTCTTTACATCAAGTTTATATGAGTAATTAACATATAGTCGAGTCAGAGTCCCC
                      ____________________________________________________________
consensus             TTCGTATTCTTTACATCAAGTTTATATGAGTAATTAACATATAGTCGAGTCAGAGTCCCC
 
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rJMSF025P20-          TGCGCCCCCTCCCTCCCTAATACTCCTAGAGAAGAAGACAAGTCTCGGGGTGCTGTTTCA
                      ____________________________________________________________
consensus             TGCGCCCCCTCCCTCCCTAATACTCCTAGAGAAGAAGACAAGTCTCGGGGTGCTGTTTCA
 
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rJMSF025P20-          TCTGTTGCTTCGCTTGTTGCTGCGACCAGTAGGCGTGGGCGGTCAGGACCCTGTCTAGCA
                      ____________________________________________________________
consensus             TCTGTTGCTTCGCTTGTTGCTGCGACCAGTAGGCGTGGGCGGTCAGGACCCTGTCTAGCA
 
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rJMSF025P20-          GCTCCTGGGGCACCGGCTCGCCTCTTCTTTGCTGTGGAGATATTCTTGCAGTATGCACTA
                      ____________________________________________________________
consensus             GCTCCTGGGGCACCGGCTCGCCTCTTCTTTGCTGTGGAGATATTCTTGCAGTATGCACTA
 
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rJMSF025P20-          ATGTTTTCCATTTGTCCTTCAAGTCGACATAAGTTCGGTGCTTGGCGTTGTCAAAAGCCC
JMFS047D06+                                                    TTGGCGTTGTCAAAAGCCC
                      ____________________________________________________________
consensus             ATGTTTTCCATTTGTCCTTCAAGTCGACATAAGTTCGGTGCTTGGCGTTGTCAAAAGCCC
 
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rJMSF025P20-          GAAGCTTAACATCACGCCATCTTCCAGTACCAAGCTTCTCAACAGCTTGAACAAGCGCTT
JMFS047D06+           GAAGCTTAACATCACGCCATCTTCCAGTACCAAGCTTCTCAACAGCTTGAACAAGCGCTT
                      ____________________________________________________________
consensus             GAAGCTTAACATCACGCCATCTTCCAGTACCAAGCTTCTCAACAGCTTGAACAAGCGCTT
 
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rJMSF025P20-          CCACTTCAGTAACGGAGAAAGGTCGGCGAATTCNACGTCGTGCTGCCTCAGATCGCTTTG
JMFS047D06+           CCACTTCAGTAACGGAGAAAGGTCGGCGAATTCGACGTCGTGCTGCCTCAGATCGCTTTG
                      ____________________________________________________________
consensus             CCACTTCAGTAACGGAGAAAGGTCGGCGAATTCGACGTCGTGCTGCCTCAGATCGCTTTG
 
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rJMSF025P20-          GTTTCCGCACTGGAACTGCGGCAAATGTTTCCAGATTTACCCCTGGGGCAGCAACCAATG
JMFS047D06+           GTTTCCGCACTGGAACTGCGGCAAATGTTTCCAGATTTACCCCTGGGGCAGCAACCAATG
                      ____________________________________________________________
consensus             GTTTCCGCACTGGAACTGCGGCAAATGTTTCCAGATTTACCCCTGGGGCAGCAACCAATG
 
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rJMSF025P20-          CTCTTGAATCTGCTGCATGTTTTTCTAACGAGACATTGGCACGGGATGGATCTAAATCAT
JMFS047D06+           CTCTTGAATCTGCTGCATGTTTTTCTAACGAGACATTGGCACGGGATGGATCTAAATCAT
                      ____________________________________________________________
consensus             CTCTTGAATCTGCTGCATGTTTTTCTAACGAGACATTGGCACGGGATGGATCTAAATCAT
 
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rJMSF025P20-          GACTACTTCCAATGAAATTGATCAAATTTGTTCCTGCTTCATCATTGAGGATATTGGCAG
JMFS047D06+           GACTACTTCCAATGAAATTGATCAAATTTGTTCCTGCTTCATCATTGAGGATATTGGCAG
                      ____________________________________________________________
consensus             GACTACTTCCAATGAAATTGATCAAATTTGTTCCTGCTTCATCATTGAGGATATTGGCAG
 
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rJMSF025P20-          GTCCCGCTTGCACCACAGCATGAGCTATGCTGCGAGCAGCTGGATA              
JMFS047D06+           GTCCCGCTTGCACCACAGCATGAGCTATGCTGCGAGCAGCTGGATACCTTTTTAGTGGTC
                      ____________________________________________________________
consensus             GTCCCGCTTGCACCACAGCATGAGCTATGCTGCGAGCAGCTGGATACCTTTTTAGTGGTC
 
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JMFS047D06+           TTGGTGTATCACAATAAGGTTGAGTATGGGCTTCTGAACCCAGAAGTGGGGGATCTTGAG
                      ____________________________________________________________
consensus             TTGGTGTATCACAATAAGGTTGAGTATGGGCTTCTGAACCCAGAAGTGGGGGATCTTGAG
 
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JMFS047D06+           AAGGATTGGGCTCAAGAGTGAAACCCAGAGCATCGAGCTTGTTATTGTGAGAAATTCCTG
                      ____________________________________________________________
consensus             AAGGATTGGGCTCAAGAGTGAAACCCAGAGCATCGAGCTTGTTATTGTGAGAAATTCCTG
 
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JMFS047D06+           TCTGTAATAAGGTTTTCTTGTCATCTCCAACTTTCTTTCCTTGGAAAACCACACCAACAC
                      ____________________________________________________________
consensus             TCTGTAATAAGGTTTTCTTGTCATCTCCAACTTTCTTTCCTTGGAAAACCACACCAACAC
 
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JMFS047D06+           ATAGCCCATCTCCAAGAATTCTGGTCACTGCCTCCATTGGTTCTCTCAAGAGGACAGTCA
                      ____________________________________________________________
consensus             ATAGCCCATCTCCAAGAATTCTGGTCACTGCCTCCATTGGTTCTCTCAAGAGGACAGTCA