Contig 013108:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS105A10+                                              TGAGTGATTTATCGTTGAGCAACGA
                      ____________________________________________________________
consensus                                                TGAGTGATTTATCGTTGAGCAACGA
 
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JMFS105A10+           CTCCATTGTTACATGCATGCGATATCTCCAGTAGTGTCTTGGATNTGTCGGATCATTTAT
                      ____________________________________________________________
consensus             CTCCATTGTTACATGCATGCGATATCTCCAGTAGTGTCTTGGATNTGTCGGATCATTTAT
 
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JMFS105A10+           TGTCTCCTCGACTGCAGGGCGAGTAGCGTAATCCTCTTTGAGTGCTAGCAAATCCTGGAG
JMFS044G12+                                                      GCTAGCAAATCCTGGAG
                      ____________________________________________________________
consensus             TGTCTCCTCGACTGCAGGGCGAGTAGCGTAATCCTCTTTGAGTGCTAGCAAATCCTGGAG
 
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JMFS105A11+                                                                      T
JMFS105A10+           AGGAAATATTGACCACATTGATGGGGACTCAACATGCTTCCGCAAGACAAAGCGGGCAAT
JMFS044G12+           AGGAAATATTGACCACATTGATGGGGACTCAACATGCTTCCGCAAGACAAAGCGGGCAAT
                      ____________________________________________________________
consensus             AGGAAATATTGACCACATTGATGGGGACTCAACATGCTTCCGCAAGACAAAGCGGGCAAT
 
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JMFS105A11+           TTCAGGAGTACACTCATCGGGTGGCACCGCACCAGATCCCACAACAGTTTGGAAATAGCG
JMFS105A10+           TTCAGGAGTACACTCATCGGGTGGCACCGCACCAGATCCCACAACAGTTTGGAAATAGCG
JMFS044G12+           TTCAGGAGTACACTCATCGGGTGGCACCGCACCAGATCCCACAACAGTTTGGAAATAGCG
                      ____________________________________________________________
consensus             TTCAGGAGTACACTCATCGGGTGGCACCGCACCAGATCCCACAACAGTTTGGAAATAGCG
 
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JMFS105A11+           ACGCCTTCTTCCTTCATCTTCTTCCCGCCAGGCACGCAAAGTGGAACAATCATGGCTCGA
JMFS105A10+           ACGCCTTCTTCCTTCATCTTCTTCCCACCAGGCACGCAAAGTGGAACAATCATGGCACGA
JMFS044G12+           ACGCCTTCTTCCTTCATCTTCTTCCCACCAGGCACGCAAAGTGGAACAATCATGGCACGA
                      ____________________________________________________________
consensus             ACGCCTTCTTCCTTCATCTTCTTCCCACCAGGCACGCAAAGTGGAACAATCATGGCACGA
 
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JMFS105A11+           TGGAGCACATACCGTCATATAGCTGTATTTTGAAGGAATACCAAATTCTCGTCCAGGTTC
JMFS105A10+           TGGAGCACATACCGTCATATAGCTGTATTCTGAAGGAATACCAAATTCTCGTCCAGGTTC
JMFS044G12+           TGGAGCACATACCGTCATATAGCTGTATTCTGAAGGAATACCAAATTCTCGTCCAGGTTC
                      ____________________________________________________________
consensus             TGGAGCACATACCGTCATATAGCTGTATTCTGAAGGAATACCAAATTCTCGTCCAGGTTC
 
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JMFS105A11+           ACTTGGCATGCGTTGAATATGTAACCCTATTAAACCAAGCTCTTGCATGACAGGATTACC
JMFS105A10+           ACTTGGCATGCGTTGAATATGTAACCCTATTAAACCAAGCTCTTGCATGACAGGATTAAC
JMFS044G12+           ACTTGGCATGCGTTGAATATGTAACCCTATTAAACCAAGCTCTTGCATGACAGGATTAAC
                      ____________________________________________________________
consensus             ACTTGGCATGCGTTGAATATGTAACCCTATTAAACCAAGCTCTTGCATGACAGGATTAAC
 
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JMFS105A11+           ACAGGCAGGAATCATGCCGAGATCTTCCCCACAAGTGAGCATATCAGATGAGTTCATAAG
JMFS105A10+           ACAGGCAGGAATCATGCCGAGATCTTCCCCACAAGTGAGCATATCAGATGAGTTCATAAG
JMFS044G12+           ACAGGCAGGAATCATGCCGAGATCTTCCCCACAAGTGAGCATATCAGATGAGTTCATAAG
                      ____________________________________________________________
consensus             ACAGGCAGGAATCATGCCGAGATCTTCCCCACAAGTGAGCATATCAGATGAGTTCATAAG
 
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JMFS105A11+           AACAGGCAGAGTGTTCAAAGCATTTTGACGCCACAGGCTTTCTTGTCGGTGGAAGTAGTA
JMFS105A10+           AACAGGCAGAGTGTTCAAAGCATTTTGACGCCACAGGCTTTCTTGTCGGTGGAAGTAGTA
JMFS044G12+           AACAGGCAGAGTGTTCAAAGCATTTTGACGCCACAGGCTTTCTTGTCGGTGGAAGTAGTA
                      ____________________________________________________________
consensus             AACAGGCAGAGTGTTCAAAGCATTTTGACGCCACAGGCTTTCTTGTCGGTGGAAGTAGTA
 
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JMFS105A11+           ATCATAGTATAGTCTTTTCAGAACATTTTTACTGTGCTGATCTAAACCCTT         
JMFS105A10+           ATCATAGTATAGTCTTTTCAGAACATTTTTACTGTGCTGATCTAAACCCTT         
JMFS044G12+           ATCATAGTATAGTCTTTTCAGAACATTTTTACTGTGCTGATCTAAACCCTTGAAACTTGA
                      ____________________________________________________________
consensus             ATCATAGTATAGTCTTTTCAGAACATTTTTACTGTGCTGATCTAAACCCTTGAAACTTGA
 
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JMFS044G12+           AGTGTCTTCAAGGTTGAAACGAGGATAAAACTTTCTTGGATCTTCTCGATCCCGGATAAG
                      ____________________________________________________________
consensus             AGTGTCTTCAAGGTTGAAACGAGGATAAAACTTTCTTGGATCTTCTCGATCCCGGATAAG
 
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JMFS044G12+           GACTACTTCCTGTAAAAGATCAAAGAGATTCCTTCGCAGTTTCTCTTCATTCTCTACAAA
                      ____________________________________________________________
consensus             GACTACTTCCTGTAAAAGATCAAAGAGATTCCTTCGCAGTTTCTCTTCATTCTCTACAAA