Contig 013106:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN019E02Sequence341013106 (3)gb|ABK95037.1|9e-47unknown [Populus trichocarpa]
JMFS044B10Sequence624013106 (3)ref|XP_007009874.1|2e-137Adenosine kinase 2 [Theobroma cacao] gb|EOY18684.1| Adenosine kinase 2 [Theobrom
JMFS117G07Sequence612013106 (3)ref|XP_007009874.1|5e-132Adenosine kinase 2 [Theobroma cacao] gb|EOY18684.1| Adenosine kinase 2 [Theobrom

Alignment

This contig is upended


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JMFN019E02+                                                     TAAAGATGATAGGAAAGC
                      ____________________________________________________________
consensus                                                       TAAAGATGATAGGAAAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN019E02+           AACCGTAATGAATAGAACATGAAAATTTTTAGGAAAACTGGGATTAAGAAAGAAATTTTG
                      ____________________________________________________________
consensus             AACCGTAATGAATAGAACATGAAAATTTTTAGGAAAACTGGGATTAAGAAAGAAATTTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN019E02+           AAGTGCCTATTGAAAGTCTGGCTTCTCAGGGTAGGTGCAGCCAGATCTCTGGATTATGAC
                      ____________________________________________________________
consensus             AAGTGCCTATTGAAAGTCTGGCTTCTCAGGGTAGGTGCAGCCAGATCTCTGGATTATGAC
 
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JMFN019E02+           ATTTGCACCATAAACACCGGCTCGAACACAGTCTGCAATGGGTTTTTTTTGGACCAACTG
                      ____________________________________________________________
consensus             ATTTGCACCATAAACACCGGCTCGAACACAGTCTGCAATGGGTTTTTTTTGGACCAACTG
 
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JMFN019E02+           CGAGAGGAACCCTCCAACAAACGCATCGCCTGCACCATTGGTGTCAACAAGTTTCTCTTT
JMFS117G07+                        CCAACAAACGCATCGCCTGCACCATTGGTGTCAACAAGTTTCTCTTT
                      ____________________________________________________________
consensus             CGAGAGGAACCCTCCAACAAACGCATCGCCTGCACCATTGGTGTCAACAAGTTTCTCTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN019E02+           TGGCAACAGTGTAACGGGGAACAGTCTTACTTTCCCATCTTCAGCAACAACAACAGGATC
JMFS117G07+           TGGCAACAGTGTAACGGGGAACAGTCTTACTTTCCCATCTTCAGCAACAACAACAGGATC
                      ____________________________________________________________
consensus             TGGCAACAGTGTAACGGGGAACAGTCTTACTTTCCCATCTTCAGCAACAACAACAGGATC
 
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JMFN019E02+           AGCACCCTGGGTGATTACAGTAA                                     
JMFS117G07+           AGCACCCTGGGTGATTACAGTAATTCTCTTGTGCGTTCCAGATGCCTTGGGCCACTGGGA
                      ____________________________________________________________
consensus             AGCACCCTGGGTGATTACAGTAATTCTCTTGTGCGTTCCAGATGCCTTGGGCCACTGGGA
 
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JMFS117G07+           GATCTTCAGCGCTATTTCTTCGACATTGTCGGTCTCCCAACCATGAACTTTGGAGAAAGT
JMFS044B10+                                               CCAACCATGAACTTTGGAGAAAGT
                      ____________________________________________________________
consensus             GATCTTCAGCGCTATTTCTTCGACATTGTCGGTCTCCCAACCATGAACTTTGGAGAAAGT
 
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JMFS117G07+           TCTGGCTTCTGTCTCGTTTCCAAAGACATAGTCTATATACGGAAAAGCTTTCTCCTGTAC
JMFS044B10+           TCTGGCTTCTGTCTCGTTTCCAAAGACATAGTCTATATACGGAAAAGCTTTCTCCTGTAC
                      ____________________________________________________________
consensus             TCTGGCTTCTGTCTCGTTTCCAAAGACATAGTCTATATACGGAAAAGCTTTCTCCTGTAC
 
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JMFS117G07+           ATCCTTGAAGAACTCACATATAAATGGTGCAGAAAGGTTCATCATGAAAACCTTGTTTTT
JMFS044B10+           ATCCTTGAAGAACTCACATATAAATGGTGCAGAAAGGTTCATCATGAAAACCTTGTTTTT
                      ____________________________________________________________
consensus             ATCCTTGAAGAACTCACATATAAATGGTGCAGAAAGGTTCATCATGAAAACCTTGTTTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS117G07+           TGCAGCTGCATGCTCAGCAACGAGTTGAATGGATTCTGGGGAAACGGTGAGAAAGAATCC
JMFS044B10+           TGCAGCTGCATGCTCAGCAACGAGTTGAATGGATTCTGGGGAAACGGTGAGAAAGAATCC
                      ____________________________________________________________
consensus             TGCAGCTGCATGCTCAGCAACGAGTTGAATGGATTCTGGGGAAACGGTGAGAAAGAATCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS117G07+           AGCAATGTAGTAGTACTTGGCCTTTTCAACCAATGCCCAATTTTCTGGTTTTTTCAAGTG
JMFS044B10+           AGCAATGTAGTAGTACTTGGCCTTTTCAACCAATGCCCAATTTTCTGGTTTTTTCAAGTG
                      ____________________________________________________________
consensus             AGCAATGTAGTAGTACTTGGCCTTTTCAACCAATGCCCAATTTTCTGGTTTTTTCAAGTG
 
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JMFS117G07+           GTCCGACTTATAGCAATTTGCAGCTGACAAGTTGGCAACAAGTGACCTTTCTCCATCCAC
JMFS044B10+           GTCCGACTTATAGCAATTTGCAGCTGACAAGTTGGCAACAAGTGACCTTTCTCCATCCAC
                      ____________________________________________________________
consensus             GTCCGACTTATAGCAATTTGCAGCTGACAAGTTGGCAACAAGTGACCTTTCTCCATCCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS117G07+           CACACAAACAGCACAAGTACCTGTCGGAGTATTCTCATCCTCATAATAGTGAAC      
JMFS044B10+           CACACAAACAGCACAAGTACCTGTCGGAGTATTCTCATCCTCATAATAGTGAACATTAAC
                      ____________________________________________________________
consensus             CACACAAACAGCACAAGTACCTGTCGGAGTATTCTCATCCTCATAATAGTGAACATTAAC
 
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JMFS044B10+           ACCAGCTTCTTTTGCATGCTTCTTCATTTCGCCCCCAAATTTGTCCTTTCCAATGCAACC
                      ____________________________________________________________
consensus             ACCAGCTTCTTTTGCATGCTTCTTCATTTCGCCCCCAAATTTGTCCTTTCCAATGCAACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS044B10+           CATGTAACTGGTGGCACCTGGTTTTTGAATCATCCACTGAGCAACTCTGATCGAATTCTG
                      ____________________________________________________________
consensus             CATGTAACTGGTGGCACCTGGTTTTTGAATCATCCACTGAGCAACTCTGATCGAATTCTG
 
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JMFS044B10+           AGTTGAACCTCCAGCAATGTATTCAACAGAGTACTTTGATGACATTTCTTCATACATAGG
                      ____________________________________________________________
consensus             AGTTGAACCTCCAGCAATGTATTCAACAGAGTACTTTGATGACATTTCTTCATACATAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS044B10+           CAAGTGCTTTTCCTCTGCCAGAATTGCATTGTTCAACTTGATTTCATACTTGTTTAAGAA
                      ____________________________________________________________
consensus             CAAGTGCTTTTCCTCTGCCAGAATTGCATTGTTCAACTTGATTTCATACTTGTTTAAGAA