Contig 013098:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF029G02Sequence710013098 (4)ref|XP_008365616.1|4e-06PREDICTED: protein MEI2-like 2 [Malus domestica]
JMFF037H01Sequence537011819 (3)716013098 (4)ref|XP_009773170.1|1e-07PREDICTED: protein MEI2-like 2 isoform X1 [Nicotiana sylvestris]
JMFS032B08Sequence543013098 (4)
JMSF025G07Sequence611011819 (3)718013098 (4)ref|XP_009773170.1|5e-15PREDICTED: protein MEI2-like 2 isoform X1 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF025G07+                                                                  CTTC
                      ____________________________________________________________
consensus                                                                     CTTC
 
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rJMSF025G07+          CAGTCAGAGGGGCAGGAGACTGCAGACGAGGAACCTTTACCTTCCAGCAACCTGAATGTT
rJMFF029G02+                                                            CCTGAATGTT
rJMFF037H01+                                                            CCTGAATGTT
                      ____________________________________________________________
consensus             CAGTCAGAGGGGCAGGAGACTGCAGACGAGGAACCTTTACCTTCCAGCAACCTGAATGTT
 
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rJMSF025G07+          TGTATTCGACGGCCTGATGGGTCCTATACCGGAGACTCCCTGGATAGTCCCAAGGATAAT
rJMFF029G02+          TGTATTCGACGGCCTGATGGGTCCTATACCGGAGACTCCCTGGATAGTCCCAAGGATAAT
rJMFF037H01+          TGTATTCGACGGCCTGATGGGTCCTATACCGGAGACTCCCTGGATAGTCCCAAGGATAAT
                      ____________________________________________________________
consensus             TGTATTCGACGGCCTGATGGGTCCTATACCGGAGACTCCCTGGATAGTCCCAAGGATAAT
 
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rJMSF025G07+          CTCGATGAGAAG-CCAGTGACTTCTACATTTACTGGAAGCGCCTGACCCTCGAATATGAT
rJMFF029G02+          CTCGATGAGAAGCCCAGTGACTTCTACATTTACTGGAAGCGCCTGACCCTCGAATATGAT
rJMFF037H01+          CTCGATGAGAAG-CCAGTGACTTCTACATTTACTGGAAGCGCCTGACCCTCGAATATGAT
                      ____________________________________________________________
consensus             CTCGATGAGAAG-CCAGTGACTTCTACATTTACTGGAAGCGCCTGACCCTCGAATATGAT
 
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rJMSF025G07+          GGCCGTGGATTCTAACTGTTAATAGATATTTCAGTACATATAATAAGTCAGCAGAAATGT
rJMFF029G02+          GGCCGTGGATTCTAACTGTTAATAGATATTTCAGTACATATAATAAGTCAGCAGAAATGT
rJMFF037H01+          GGCCGTGGATTCTAACTGTTAATAGATATTTCAGTACATATAATAAGTCAGCAGAAATGT
                      ____________________________________________________________
consensus             GGCCGTGGATTCTAACTGTTAATAGATATTTCAGTACATATAATAAGTCAGCAGAAATGT
 
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rJMSF025G07+          GAAGATTGCTTTGAGGTTGTATGCTAGGCCGTGTCTGGTTTTTGGATGGAGGACACTCGG
rJMFF029G02+          GAAGATTGCTTTGAGGTTGTATGNTAGGCCGTGTCTGGTTTTTGGATGGAGGACACTCGG
rJMFF037H01+          GAAGATTGCTTTGAGGTTGTATGCTAGGCCGTGTCTGGTTTTTGGATGGAGGACACTCGG
JMFS032B08+                                                                    CGG
                      ____________________________________________________________
consensus             GAAGATTGCTTTGAGGTTGTATGCTAGGCCGTGTCTGGTTTTTGGATGGAGGACACTCGG
 
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rJMSF025G07+          GGCATTTCCCGCAAGGCAGAGGGAACAGTTAACTTATGTTTTGTAGCGCACGAATTGGTA
rJMFF029G02+          GGCATTTCCCGCAAGGCAGAGGGAACAGTTAACTTATGTTTTGTAGCGCACGAATTGGTA
rJMFF037H01+          GGCATTTCCCGCAAGGCAGAGGGAACAGTTAACTTATGTTTTGTAGCGCACGAATTGGTA
JMFS032B08+           GGCATTTCCCGCAAGGCAGAGGGAACAGTTAACTTATGTTTTGTAGCGCACGAATTGGTA
                      ____________________________________________________________
consensus             GGCATTTCCCGCAAGGCAGAGGGAACAGTTAACTTATGTTTTGTAGCGCACGAATTGGTA
 
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rJMSF025G07+          GTATTTAACACGGTGACAAGAATTCTACCGTCCGGGCTGCTGGCGCAAAGCATCTCCTTT
rJMFF029G02+          GTATTTAACACGGTGACAAGAATTCTACCGTCCGGGCTGCTGGCGCAAAGCATCTCCTTT
rJMFF037H01+          GTATTTAACACGGTGACAAGAATTCTACCGTCCGGGCTGCTGGCGCAAAGCATCTCCTTT
JMFS032B08+           GTATTTAACACGGTGACAAGAATTCTACCGTCCGGGCTGCTGGCGCAAAGCATCTCCTTT
                      ____________________________________________________________
consensus             GTATTTAACACGGTGACAAGAATTCTACCGTCCGGGCTGCTGGCGCAAAGCATCTCCTTT
 
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rJMSF025G07+          GTGATCTTACTTGTTCATCGTCCTTGTAATTTCCTTGTATAGTGTTTTGTTATGGGGTAA
rJMFF029G02+          GTGATCTTACTTGTTCATCGTCCTTGTAATTTCCTTGTATAGTGTTTTGTTATGGGGTAA
rJMFF037H01+          GTGATCTTACTTGTTCATCGTCCTTGTAATTTCCTTGTATAGTGTTTTGTTATGGGGTAA
JMFS032B08+           GTGATCTTACTTGTTCATCGTCCTTGTAATTTCCTTGTATAGTGTTTTGTTATGGGGTAA
                      ____________________________________________________________
consensus             GTGATCTTACTTGTTCATCGTCCTTGTAATTTCCTTGTATAGTGTTTTGTTATGGGGTAA
 
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rJMSF025G07+          TGCTAAACAGGACACTAGTTAAGGATGTTGGTTCGGTTCTTTTCTTTTTGTTTTGGACAA
rJMFF029G02+          TGCTAAACAGGACACTAGTTAAGGATGTTGGTTCGGTTCTTTTCTTTTTGTTTTGGACAA
rJMFF037H01+          TGCTAAACAGGACACTAGTTAAGGATGTTGGTTCGGTTCTTTTCTTTTTGTTTTGGACAA
JMFS032B08+           TGCTAAACAGGACACTAGTTAAGGATGTTGGTTCGGTTCTTTTCTTTTTGTTTTGGACAA
                      ____________________________________________________________
consensus             TGCTAAACAGGACACTAGTTAAGGATGTTGGTTCGGTTCTTTTCTTTTTGTTTTGGACAA
 
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rJMSF025G07+          CATGGGAGTTGGGGCCTGGGGGGCTCCAATCTTTGTTTTACAAGTCCAAAATAAAGAAGA
rJMFF029G02+          CATGGGAGTTGGGGCCTGGGGGGCTCCAATCTTTGTTTTACAAGTCCAAAATAAAGAAGA
rJMFF037H01+          CATGGGAGTTGGGGCCTGGGGGGCTCCAATCTTTGTTTTACAAGTCCAAAATAAAGAAGA
JMFS032B08+           CATGGGAGTTGGGGCCTGGGGGGCTCCAATCTTTGTTTTACAAGTCCAAAATAAAGAAGA
                      ____________________________________________________________
consensus             CATGGGAGTTGGGGCCTGGGGGGCTCCAATCTTTGTTTTACAAGTCCAAAATAAAGAAGA
 
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rJMSF025G07+          AAAGGATTGAAGATATGTCCTAATAGTAAAACCCTTCTTGTATAGTGGGTTTAGGGCAGT
rJMFF029G02+          AAAGGATTGAAGATATGTCCTAATAGTAAAACCCTTCTTGTATAGTGGGTTTAGGGCAGT
rJMFF037H01+          AAAGGATTGAAGATATGTCCTAATAGTAAAACCCTTCTTGTATAGTGGGTTTAGGGCAGT
JMFS032B08+           AAAGGATTGAAGATATGTCCTAATAGTAAAACCCTTCTTGTATAGTGGGTTTAGGGCAGT
                      ____________________________________________________________
consensus             AAAGGATTGAAGATATGTCCTAATAGTAAAACCCTTCTTGTATAGTGGGTTTAGGGCAGT
 
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rJMSF025G07+          CTCTCAAGTGTATAGGATGCAGGCAAACAGACCACC                        
rJMFF029G02+          CTCTCAAGTGTATAGGATGCAGGCAAACAGACCACCTGCATCTTTTGAGTTTACTTGTGA
rJMFF037H01+          CTCTCAAGTGTATAGGATGCAGGCAAACAGACCACCTGCATCTTTTGAGTTTACTTGTGA
JMFS032B08+           CTCTCAAGTGTATAGGATGCAGGCAAACAGACCACCTGCATCTTTTGAGTTTACTTGTGA
                      ____________________________________________________________
consensus             CTCTCAAGTGTATAGGATGCAGGCAAACAGACCACCTGCATCTTTTGAGTTTACTTGTGA
 
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rJMFF029G02+          TCATGTACCTAGAAAACTGTTGCGTTTATGAT                            
rJMFF037H01+          TCATGTACCTAGAAAACTGTTGCGTTTATGAT                            
JMFS032B08+           TCATGTACCTAGAAAACTGTTGCGTTTATGATGTTAATGTACATGGAATTTTTTCAATTG
                      ____________________________________________________________
consensus             TCATGTACCTAGAAAACTGTTGCGTTTATGATGTTAATGTACATGGAATTTTTTCAATTG
 
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JMFS032B08+           TATTTTGACCTCCTTACTCTGTAAAAAAAAAAAAAAAAAACTCGAGATAGTCTCTCTCTC
                      ____________________________________________________________
consensus             TATTTTGACCTCCTTACTCTGTAAAAAAAAAAAAAAAAAACTCGAGATAGTCTCTCTCTC