Contig 013087:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS020B09Sequence603013087 (2)dbj|BAP19107.1|1e-124ethylene insensitive2, partial [Ipomoea nil]
JMFS147D11Sequence642013087 (2)dbj|BAP19107.1|2e-133ethylene insensitive2, partial [Ipomoea nil]

Alignment

This contig is upended


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JMFS147D11+                 CTGTCAGAAGTCAAAGATTGATTATTTGTAGAGATCTCTTNTGTTGCTTCTTCA
                      ____________________________________________________________
consensus                   CTGTCAGAAGTCAAAGATTGATTATTTGTAGAGATCTCTTNTGTTGCTTCTTCA
 
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JMFS147D11+           GGCTCCCAAGAATCTCTATCATCATCCTTATCATTCTGAATATCACCTTCAATTTGAAGT
JMFS020B09+                                                                    AGT
                      ____________________________________________________________
consensus             GGCTCCCAAGAATCTCTATCATCATCCTTATCATTCTGAATATCACCTTCAATTTGAAGT
 
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JMFS147D11+           GTCTTTTCTACAACATCAAATGGTTCAGCAGGCAGGATTTCAGCATCTGTTAGTTCACCA
JMFS020B09+           GTCTTTTCTACAACATCAAATGGTTCAGCAGGCAGGATTTCAGCATCTGTTAGTTCACCA
                      ____________________________________________________________
consensus             GTCTTTTCTACAACATCAAATGGTTCAGCAGGCAGGATTTCAGCATCTGTTAGTTCACCA
 
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JMFS147D11+           ATTGAAATTTTGTCAGGAGTTTTGCTGACTGGATCAGCATCTTCAGCTGGTGTTGTTACC
JMFS020B09+           ATTGAAATTTTGTCAGGAGTTTTGCTGACTGGATCAGCATCTTCAGCTGGTGTTGTTACC
                      ____________________________________________________________
consensus             ATTGAAATTTTGTCAGGAGTTTTGCTGACTGGATCAGCATCTTCAGCTGGTGTTGTTACC
 
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JMFS147D11+           TGTGGATGGCAAGTAGAATTGCTTGCAAATGTTATTTCAGATTTGTTCTCATCAATGGTT
JMFS020B09+           TGTGGATGGCAAGTAGAATTGCTTGCAAATGTTATTTCAGATTTGTTCTCATCAATGGTT
                      ____________________________________________________________
consensus             TGTGGATGGCAAGTAGAATTGCTTGCAAATGTTATTTCAGATTTGTTCTCATCAATGGTT
 
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JMFS147D11+           GTTAGCTGAGGACCCCTTTCAAAATTCAACAGAGATTCAGGCAGGTTTGAATCAAGTTCT
JMFS020B09+           GTTAGCTGAGGACCCCTTTCAAAATTCAACAGAGATTCAGGCAGGTTTGAATCAAGTTCT
                      ____________________________________________________________
consensus             GTTAGCTGAGGACCCCTTTCAAAATTCAACAGAGATTCAGGCAGGTTTGAATCAAGTTCT
 
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JMFS147D11+           CGAGTAGGTAAATCTAAACGACAGCCAAAGGATTTATCAAATTGTAATGCAGGTTCCTGA
JMFS020B09+           CGAGTAGGTAAATCTAAACGACAGCCAAAGGATTTATCAAATTGTAATGCAGGTTCCTGA
                      ____________________________________________________________
consensus             CGAGTAGGTAAATCTAAACGACAGCCAAAGGATTTATCAAATTGTAATGCAGGTTCCTGA
 
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JMFS147D11+           CTATGCATAGGAATTCCTAAATTAGATATAGATTCATTAGCATTAGGTTCATCCCCGACT
JMFS020B09+           CTATGCATAGGAATTCCTAAATTAGATATAGATTCATTAGCATTAGGTTCATCCCCGACT
                      ____________________________________________________________
consensus             CTATGCATAGGAATTCCTAAATTAGATATAGATTCATTAGCATTAGGTTCATCCCCGACT
 
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JMFS147D11+           AGAGATGACTCGGGCATAGGAGGATCAAATCTAGAACTAGCAGATTTCAGTGGAGTAGCT
JMFS020B09+           AGAGATGACTCGGGCATAGGAGGATCAAATCTAGAACTAGCAGATTTCAGTGGAGTAGCT
                      ____________________________________________________________
consensus             AGAGATGACTCGGGCATAGGAGGATCAAATCTAGAACTAGCAGATTTCAGTGGAGTAGCT
 
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JMFS147D11+           GCTAACCACAGCATCAAACAAAGGGAACTAGAGGCAGCAATGAGAAGGATAGCATAAGGG
JMFS020B09+           GCTAACCACAGCATCAAACAAAGGGAACTAGAGGCAGCAATGAGAAGGATAGCATAAGGG
                      ____________________________________________________________
consensus             GCTAACCACAGCATCAAACAAAGGGAACTAGAGGCAGCAATGAGAAGGATAGCATAAGGG
 
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JMFS147D11+           CTACTCCCAGTATTCCACTTCAAATTGTTCACCCAATCACTATTTCCA            
JMFS020B09+           CTACTCCCAGTATTCCACTTCAAATTGTTCACCCAATCACTATTTCCAAATATCATCTCG
                      ____________________________________________________________
consensus             CTACTCCCAGTATTCCACTTCAAATTGTTCACCCAATCACTATTTCCAAATATCATCTCG
 
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JMFS020B09+           GTGACAAATATAATTTTGAGGCCAAGCATGGCAAAAAATGTACCCAGGGCTAAGAGCTCC
                      ____________________________________________________________
consensus             GTGACAAATATAATTTTGAGGCCAAGCATGGCAAAAAATGTACCCAGGGCTAAGAGCTCC