Contig 013081:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS014A12Sequence610013081 (6)
JMFS039A03Sequence595013081 (6)
JMFS041D05Sequence665013081 (6)
JMFS159H05Sequence528013081 (6)
JMFS167B01Sequence613013081 (6)
JMSF051H03Sequence673013081 (6)650010188 (3)ref|XP_009618686.1|162PREDICTED: uncharacterized protein LOC104110833 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFS159H05+                        CTTCATCAACACTATCCTTTCTCTCATCATCATCATCAGCTTCATTT
                      ____________________________________________________________
consensus                          CTTCATCAACACTATCCTTTCTCTCATCATCATCATCAGCTTCATTT
 
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JMFS159H05+           CCTAATCTTCCATCCCCATTAATAGCTTCAGTTTGTGGCTTCTCCTCTTTCTTCAAAACA
JMFS041D05+                                                       CTCTTTCTTCAAAACA
                      ____________________________________________________________
consensus             CCTAATCTTCCATCCCCATTAATAGCTTCAGTTTGTGGCTTCTCCTCTTTCTTCAAAACA
 
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JMFS159H05+           GGAGAATTATTATTATTATTATTATCATTTCCTCTTAGTGCCAATTCCTCTTTCTCAGTC
JMFS041D05+           GGAGAATTATTATTATATNNATTATCATTTCCTCTTAGTGCCAATTCCTCTTTCTCAGTC
JMFS039A03+                                                              TTCTCAGTC
JMFS167B01+                                                   CCAATTCCTCTTTCTCAGTC
                      ____________________________________________________________
consensus             GGAGAATTATTATTATTTTTATTATCATTTCCTCTTAGTGCCAATTCCTCTTTCTCAGTC
 
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JMFS159H05+           TCCAATGTACCATGGACTTGTACCAAAAGAGAAATCCCATCACCAATAACGGCATCCTGT
JMFS041D05+           TCCAATGTACCATGGACTTGTACCAAAAGAGAAATCCCATCACCAATAACGGCATCCTGT
JMFS039A03+           TCCAATGTACCATGGACTTGTACCAAAAGAGAAATCCCATCACCAATAACGGCATCCTGT
JMFS167B01+           TCCAATGTACCATGGACTTGTACCAAAAGAGAAATCCCATCACCAATAACGGCATCCTGT
JMSF051H03+                               TACCAAAAGAGAAATCCCATCACCAATAACGGCATCCTGT
                      ____________________________________________________________
consensus             TCCAATGTACCATGGACTTGTACCAAAAGAGAAATCCCATCACCAATAACGGCATCCTGT
 
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JMFS159H05+           TCATTAACGGACAAAAAGTCCCCATTTTGATCACTGCCCAAACCTCCATTATCACCAGGA
JMFS041D05+           TCATTAACGGACAAAAAGTCCCCATTTTGATCACTGCCCAAACCTCCATTATCACCAGGA
JMFS039A03+           TCATTAACGGACAAAAAGTCCCCATTTTGATCACTGCCCAAACCTCCATTATCACCAGGA
JMFS167B01+           TCATTAACGGACAAAAAGTCCCCATTTTGATCACTGCCCAAACCTCCATTATCACCAGGA
JMSF051H03+           TCATTAACGGACAAAAAGTCCCCATTTTGATCACTGCCCAAACCTCCATTATCACCAGGA
                      ____________________________________________________________
consensus             TCATTAACGGACAAAAAGTCCCCATTTTGATCACTGCCCAAACCTCCATTATCACCAGGA
 
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JMFS159H05+           GGGGGGGTTTTGGAATTGGTGAGTTCAGTAAAACCAGCCGCTAGGGTTTCAGCGGTCTCT
JMFS041D05+           GGGGGGGTTTTGGAATTGGTGAGTTCAGTAAAACCAGCCGCTAGGGTTTCAGCGGTCTCT
JMFS039A03+           GGGGGGGTTTTGGAATTGGTGAGTTCAGTAAAACCAGCCGCTAGGGTTTCAGCGGTCTCT
JMFS167B01+           GGGGGGGTTTTGGAATTGGTGAGTTCAGTAAAACCAGCCGCTAGGGTTTCAGCGGTCTCT
JMSF051H03+           GGGGGGGTTTTGGAATTGGTGAGTTCAGTAAAACCAGCCGCTAGGGTTTCAGCGGTCTCT
                      ____________________________________________________________
consensus             GGGGGGGTTTTGGAATTGGTGAGTTCAGTAAAACCAGCCGCTAGGGTTTCAGCGGTCTCT
 
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JMFS159H05+           GATTCTTTCTGCGTTGCCATTTTAGGGGAAATATCTTAAAGATTGCCCTGCCCTATCTAA
JMFS041D05+           GATTCTTTCTGCGTTGCCATTTTAGGGGAAATATCTTAAAGATTGCCCTGCCCTATCTAA
JMFS039A03+           GATTCTTTCTGCGTTGCCATTTTAGGGGAAATATCTTAAAGATTGCCCTGCCCTATCTAA
JMFS167B01+           GATTCTTTCTGCGTTGCCATTTTAGGGGAAATATCTTAAAGATTGCCCTGCCCTATCTAA
JMSF051H03+           GATTCTTTCTGCGTTGCCATTTTAGGGGAAATATCTTAAAGATTGCCCTGCCCTATCTAA
                      ____________________________________________________________
consensus             GATTCTTTCTGCGTTGCCATTTTAGGGGAAATATCTTAAAGATTGCCCTGCCCTATCTAA
 
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JMFS159H05+           TACCCCGATAATCGCGGGGACCAAGTCTCAACAAAAATGGGACCTTTGGACTCTCTTCTT
JMFS041D05+           TACCCCGATAATCGCGGGGACCAAGTCTCAACAAAAATGGGACCTTTGGACTCTCTTCTT
JMFS039A03+           TACCCCGATAATCGCGGGGACCAAGTCTCAACAAAAATGGGACCTTTGGACTCTCTTCTT
JMFS167B01+           TACCCCGATAATCGCGGGGACCAAGTCTCAACAAAAATGGGACCTTTGGACTCTCTTCTT
JMSF051H03+           TACCCCGATAATCGCGGGGACCAAGTCTCAACAAAAATGGGACCTTTGGACTCTCTTCTT
JMFS014A12+                                     CTCAACAAAAATGGGACCTTTGGACTCTCTTCTT
                      ____________________________________________________________
consensus             TACCCCGATAATCGCGGGGACCAAGTCTCAACAAAAATGGGACCTTTGGACTCTCTTCTT
 
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JMFS159H05+           CTTCAACCAGTCAACACAGATTTCTGCAGCTTCTAGATAGGCTTCTTCTTCTTCTTCAGA
JMFS041D05+           CTTCAACCAGTCAACACAGATTTCTGCAGCTTCTAGATAGGCTTCTTCTTCTTCTTCAGA
JMFS039A03+           CTTCAACCAGTCAACACAGATTTCTGCAGCTTCTAGATAGGCTTCTTCTTCTTCTTCAGA
JMFS167B01+           CTTCAACCAGTCAACACAGATTTCTGCAGCTTCTAGATAGGCTTCTTCTTCTTCTTCAGA
JMSF051H03+           CTTCAACCAGTCAACACAGATTTCTGCAGCTTCTAGATAGGCTTCTTCTTCTTCTTCAGA
JMFS014A12+           CTTCAACCAGTCAACACAGATTTCTGCAGCTTCTAGATAGGCTTCTTCTTCTTCTTCAGA
                      ____________________________________________________________
consensus             CTTCAACCAGTCAACACAGATTTCTGCAGCTTCTAGATAGGCTTCTTCTTCTTCTTCAGA
 
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JMFS159H05+           G                                                           
JMFS041D05+           GCTTCCCAAACCAAGAAATGAACAAGTCAAGAAAGTTTGAGAAACGAATAAATAAAGTGA
JMFS039A03+           GCTTCCCAAACCAAGAAATGAACAAGTCAAGAAAGTTTGAGAAACGAATAAATAAAGTGA
JMFS167B01+           GCTTCCCAAACCAAGAAATGAACAAGTCAAGAAAGTTTGAGAAACGAATAAATAAAGTGA
JMSF051H03+           GCTTCCCAAACCAAGAAATGAACAAGTCAAGAAAGTTTGAGAAACGAATAAATAAAGTGA
JMFS014A12+           GCTTCCCAAACCAAGAAATGAACAAGTCAAGAAAGTTTGAGAAACGAATAAATAAAGTGA
                      ____________________________________________________________
consensus             GCTTCCCAAACCAAGAAATGAACAAGTCAAGAAAGTTTGAGAAACGAATAAATAAAGTGA
 
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JMFS041D05+           TGAATAGGTAGCGCTCTTCTTTTCTAGTTAAACGCGATTTCGACCCGGCGCTTATCTCAA
JMFS039A03+           TGAATAGGTAGCGCTCTTCTTTTCTAGTTAAACGCGATTTCGACCCGGCGCTTATCTCAA
JMFS167B01+           TGAATAGGTAGCGCTCTTCTTTTCTAGTTAAACGCGATTTCGACCCGGCGCTTATCTCAA
JMSF051H03+           TGAATAGGTAGCGCTCTTCTTTTCTAGTTAAACGCGATTTCGACCCGGCGCTTATCTCAA
JMFS014A12+           TGAATAGGTAGCGCTCTTCTTTTCTAGTTAAACGCGATTTCGACCCGGCGCTTATCTCAA
                      ____________________________________________________________
consensus             TGAATAGGTAGCGCTCTTCTTTTCTAGTTAAACGCGATTTCGACCCGGCGCTTATCTCAA
 
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JMFS041D05+           GATCAAAATATCACATCATTTTACTGCTCGAAACTCGAAACCTTTTTAATTAATATGTTT
JMFS039A03+           GATCAAAATATCACATCATTTTACTGCTCGAAACTCGAAACCTTTTTAATTAATATGTTT
JMFS167B01+           GATCAAAATATCACATCATTTTACTGCTCGAAACTCGAAACCTTTTTAATTAATATGTTT
JMSF051H03+           GATCAAAATATCACATCATTTTACTGCTCGAAACTCGAAACCTTTTTAATTAATATGTTT
JMFS014A12+           GATCAAAATATCACATCATTTTACTGCTCGAAACTCGAAACCTTTTTAATTAATATGTTT
                      ____________________________________________________________
consensus             GATCAAAATATCACATCATTTTACTGCTCGAAACTCGAAACCTTTTTAATTAATATGTTT
 
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JMFS041D05+           TGAGTTTTTTTTATTTGTTTTTTGAGACGGTGA                           
JMFS039A03+           TGAGTTTTTTTTATTTGTTTTTTGAGACGGTGAAGTGAGGATGATT              
JMFS167B01+           TGAGTTTTTTTTATTTGTTTTTTGAGACGGTGAAGTGAGGATGATT              
JMSF051H03+           TGAGTTTTTTTTATTTGTTTTTTGAGACGGTGAAGTGAGGATGATTGATCGCGGAGGAGG
JMFS014A12+           TGAGTTTTTTTTATTTGTTTTTTGAGACGGTGAAGTGAGGATGATTGATCGCGGAGGAGG
                      ____________________________________________________________
consensus             TGAGTTTTTTTTATTTGTTTTTTGAGACGGTGAAGTGAGGATGATTGATCGCGGAGGAGG
 
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JMSF051H03+           TCTCACTCACTCGCTGGGATGCAAAAATAAAAGCATACTCGCTTGAGGCTGAGGTGGTGA
JMFS014A12+           TCTCACTCACTCGCTGGGATGCAAAAATAAAAGCATACTCGCTTGAGGCTGAGGTGGTGA
                      ____________________________________________________________
consensus             TCTCACTCACTCGCTGGGATGCAAAAATAAAAGCATACTCGCTTGAGGCTGAGGTGGTGA
 
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JMSF051H03+           GTGGTGGGTGGTGTGCGGTGTCGCCACCCAAT                            
JMFS014A12+           GTGGTGGGTGGTGTGCGGTGTCGCCACCCAATGAGTGACAGCCGTACAGTAAAGATTCCA
                      ____________________________________________________________
consensus             GTGGTGGGTGGTGTGCGGTGTCGCCACCCAATGAGTGACAGCCGTACAGTAAAGATTCCA