Contig 013080:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF049M21Sequence385013080 (9)ref|XP_011074635.1|9e-05PREDICTED: uncharacterized TPR repeat-containing protein At1g05150-like [Sesamu167022404
JMFS012B08Sequence640013080 (9)emb|CDP07440.1|3e-44unnamed protein product [Coffea canephora]
JMFS022F12Sequence603013080 (9)gb|KDO63187.1|5e-50hypothetical protein CISIN_1g035984mg [Citrus sinensis]
JMFS022G11Sequence608013080 (9)ref|XP_011074635.1|1e-45PREDICTED: uncharacterized TPR repeat-containing protein At1g05150-like [Sesamu
JMFS028H07Sequence639013080 (9)ref|XP_011074635.1|9e-45PREDICTED: uncharacterized TPR repeat-containing protein At1g05150-like [Sesamu
JMFS053G04Sequence627013080 (9)gb|KDO63187.1|1e-42hypothetical protein CISIN_1g035984mg [Citrus sinensis]
JMFS054A12Sequence622013080 (9)ref|XP_011074635.1|1e-45PREDICTED: uncharacterized TPR repeat-containing protein At1g05150-like [Sesamu
JMFS090F01Sequence605013080 (9)emb|CDP07440.1|5e-45unnamed protein product [Coffea canephora]
JMSF047D20Sequence687013080 (9)emb|CDP07440.1|1e-48unnamed protein product [Coffea canephora]634013193 (2)ref|XP_009797690.1|1e-44PREDICTED: uncharacterized TPR repeat-containing protein At1g05150-like [Nicoti

Alignment

This contig is upended


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JMSF047D20+                                                                    TCT
                      ____________________________________________________________
consensus                                                                      TCT
 
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JMFS054A12+                                                              AAGCCATCG
JMFS022G11+                                                              AAGCCATCG
JMSF047D20+           TGTGCGGCTCCATCACTCGCTCATCAGCAATCGACGACGACGCNTCTTCCGAAGCCATCG
                      ____________________________________________________________
consensus             TGTGCGGCTCCATCACTCGCTCATCAGCAATCGACGACGACGCNTCTTCCGAAGCCATCG
 
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JMFS054A12+           AAATCCCGTTATCATTNTCCGGCTTGAGTTCGAGGCCCAGCGCGTCAAAGTCCCGGTCGA
JMFS022G11+           AAATCCCGTTATCATTTTCCGGCTTGAGTTCGAGGCCCAGCGCGTCAAAGTCCCGGTCGA
JMFS090F01+                 CGTTATCATTTTCCGGCTTGAGTTCGAGGCCCAGCGCGTCAAAGTCCCGGTCGA
JMSF047D20+           AAATCCCGTTATCATTTTCCGGCTTGAGTTCGAGGCCCAGCGCGTCAAAGTCCCGGTCGA
JMFS028H07+              TCCCGTTATCATTTNCCGGCTTGAGTTCGAGGCCCAGCGCGTCAAAGTCCCGGTCGA
JMFS053G04+                                  TTGAGTTCGAGGCCCAGCGCGTCAAAGTCCCGGTCGA
JMFS022F12+                                                          AAGTCCCGGTCGA
JMFS012B08+                              CGGCTTGAGTTCGAGGCCCAGCGCGTCAAAGTCCCGGTCGA
                      ____________________________________________________________
consensus             AAATCCCGTTATCATTTTCCGGCTTGAGTTCGAGGCCCAGCGCGTCAAAGTCCCGGTCGA
 
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JMFS054A12+           CGTCGCCAGCTCCGTCATCGTAAGTACGTAACAGGCCGTCGAATGTGAGACCCTTCTCGC
JMFS022G11+           CGTCGCCAGCTCCGTCATCGTAAGTACGTAACAGGCCGTCGAATGTGAGACCCTTCTCGC
JMFS090F01+           CGTCGCCAGCTCCGTCATCGTAAGTACGTAACAGGCCGTCGAATGTGAGACCCTTCTCGC
JMSF047D20+           CGTCGCCAGCTCCGTCATCGTAAGTACGTAACAGGCCGTCGAATGTGAGACCCTTCTCGC
JMFS028H07+           CGTCGCCAGCTCCGTCATCGTAAGTACGTAACAGGCCGTCGAATGTGAGACCCTTCTCGC
JMFS053G04+           CGTCGCCAGCTCCGTCATCGTAAGTACGTAACAGGCCGTCGAATGTGAGACCCTTCTCGC
JMFS022F12+           CGTCGCCAGCTCCGTCATCGTAAGTACGTAACAGGCCGTCGAATGTGAGACCCTTCTCGC
JMFS012B08+           CGTCGCCAGCTCCGTCATCGTAAGTACGTAACAGGCCGTCGAATGTGAGACCCTTCTCGC
                      ____________________________________________________________
consensus             CGTCGCCAGCTCCGTCATCGTAAGTACGTAACAGGCCGTCGAATGTGAGACCCTTCTCGC
 
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JMFS054A12+           CGTCAATGAACTCGCCGTAGGTCCTGAAAACCTCGTCGAGAATGGCATTGATTTGCTCGT
JMFS022G11+           CGTCAATGAACTCGCCGTAGGTCCTGAAAACCTCGTCGAGAATGGCATTGATTTGCTCGT
JMFS090F01+           CGTCAATGAACTCGCCGTAGGTCCTGAAAACCTCGTCGAGAATGGCATTGATTTGCTCGT
JMSF047D20+           CGTCAATGAACTCGCCGTAGGTCCTGAAAACCTCGTCGAGAATGGCATTGATTTGCTCGT
JMFS028H07+           CGTCAATGAACTCGCCGTAGGTCCTGAAAACCTCGTCGAGAATGGCATTGATTTGCTCGT
JMFS053G04+           CGTCAATGAACTCGCCGTAGGTCCTGAAAACCTCGTCGAGAATGGCATTGATTTGCTCGT
JMFS022F12+           CGTCAATGAACTCGCCGTAGGTCCTGAAAACCTCGTCGAGAATGGCATTGATTTGCTCGT
JMFS012B08+           CGTCAATGAACTCGCCGTAGGTCCTGAAAACCTCGTCGAGAATGGCATTGATTTGCTCGT
                      ____________________________________________________________
consensus             CGTCAATGAACTCGCCGTAGGTCCTGAAAACCTCGTCGAGAATGGCATTGATTTGCTCGT
 
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JMFS054A12+           CGCTGAACTTGACCCGGGGGTTCACGGCGACCACCAAAGCCGCCATTTCCTCCCGATTCA
JMFS022G11+           CGCTGAACTTGACCCGGGGGTTCACGGCGACCACCAAAGCCGCCATTTCCTCCCGATTCA
JMFS090F01+           CGCTGAACTTGACCCGGGGGTTCACGGCGACCACCAAAGCCGCCATTTCCTCCCGATTCA
JMSF047D20+           CGCTGAACTTGACCCGGGGGTTCACGGCGACCACCAAAGCCGCCATTTCCTCCCGATTCA
JMFF049M21+                                                                 GATTCA
JMFS028H07+           CGCTGAACTTGACCCGGGGGTTCACGGCGACCACCAAAGCCGCCATTTCCTCCCGATTCA
JMFS053G04+           CGCTGAACTTGACCCGGGGGTTCACGGCGACCACCAAAGCCGCCATTTCCTCCCGATTCA
JMFS022F12+           CGCTGAACTTGACCCGGGGGTTCACGGCGACCACCAAAGCCGCCATTTCCTCCCGATTCA
JMFS012B08+           CGCTGAACTTGACCCGGGGGTTCACGGCGACCACCAAAGCCGCCATTTCCTCCCGATTCA
                      ____________________________________________________________
consensus             CGCTGAACTTGACCCGGGGGTTCACGGCGACCACCAAAGCCGCCATTTCCTCCCGATTCA
 
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JMFS054A12+           GACCGCCGTCCCTGTTCACATCGAATTGCTGGAATATTCTCTTCACCTTCTCAGATCTGC
JMFS022G11+           GACCGCCGTCCCTGTTCACATCGAATTGCTGGAATATTCTCTTCACCTTCTCAGATCTGC
JMFS090F01+           GACCGCCGTCCCTGTTCACATCGAATTGCTGGAATATTCTCTTCACCTTCTCAGATCTGC
JMSF047D20+           GACCGCCGTCCCTGTTCACATCGAATTGCTGGAATATTCTCTTCACCTTCTCAGATCTGC
JMFF049M21+           GACCGCGGTCCCTGTTCACATGGAATTGCTGGAATATTCTCTTCACCTTCTCAGATCTGC
JMFS028H07+           GACCGCCGTCCCTGTTCACATCGAATTGCTGGAATATTCTCTTCACCTTCTCAGATCTGC
JMFS053G04+           GACCGCCGTCCCTGTTCACATCGAATTGCTGGAATATTCTCTTCACCTTCTCAGATCTGC
JMFS022F12+           GACCGCCGTCCCTGTTCACATCGAATTGCTGGAATATTCTCTTCACCTTCTCAGATCTGC
JMFS012B08+           GACCGCCGTCCCTGTTCACATCGAATTGCTGGAATATTCTCTTCACCTTCTCAGATCTGC
                      ____________________________________________________________
consensus             GACCGCCGTCCCTGTTCACATCGAATTGCTGGAATATTCTCTTCACCTTCTCAGATCTGC
 
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JMFS054A12+           TCCCCCTCGTCGACATTTTTTCCTTTCAATTAGGGTTTTGAACAACAATTCAAAACCCCA
JMFS022G11+           TCCCCCTCGTCGACATTTTTTCCTTTCAATTAGGGTTTTGAACAACAATTCAAAACCCCA
JMFS090F01+           TCCCCCTCGTCGACATTTTTTCCTTTCAATTAGGGTTTTGAACAACAATTCAAAACCCCA
JMSF047D20+           TCCCCCTCGTCGACATTTTTTCCTTTCAATTAGGGTTTTGAACAACAATTCAAAACCCCA
JMFF049M21+           TCCCCCTCGTCGACATTTTTTCCTTTCAATTAGGGTTTTGAACAACAATTCAAAACGCCA
JMFS028H07+           TCCCCCTCGTCGACATTTTTTCCTTTCAATTAGGGTTTTGAACAACAATTCAAAACCCCA
JMFS053G04+           TCCCCCTCGTCGACATTTTTTCCTTTCAATTAGGGTTTTGAACAACAATTCAAAACCCCA
JMFS022F12+           TCCCCCTCGTCGACATTTTTTCCTTTCAATTAGGGTTTTGAACAACAATTCAAAACCCCA
JMFS012B08+           TCCCCCTCGTCGACATTTTTTCCTTTCAATTAGGGTTTTGAACAACAATTCAAAACCCCA
                      ____________________________________________________________
consensus             TCCCCCTCGTCGACATTTTTTCCTTTCAATTAGGGTTTTGAACAACAATTCAAAACCCCA
 
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JMFS054A12+           GATTC-CAAAGTCGCGAATTTGGAAACCAAAAATTGATAACAAAGGGAGGTCGAAATCCA
JMFS022G11+           GATTC-CAAAGTCGCGAATTTGGAAACCAAAAATTGATAACAAAGGGAGGTCGAAATCCA
JMFS090F01+           GATTC-CAAAGTCGCGAATTTGGAAACCAAAAATTGATAACAAAGGGAGGTCGAAATCCA
JMSF047D20+           GATTC-CAAAGTCGCGAATTTGGAAACCAAAAATTGATAACAAAGGGAGGTCGAAATCCA
JMFF049M21+           GATTCGCAGAGTCGCGAATTTGGAAACCAAAAATTGATAACAAAGGGAGGTCGAAATCCA
JMFS028H07+           GATTC-CAAAGTCGCGAATTTGGAAACCAAAAATTGATAACAAAGGGAGGTCGAAATCCA
JMFS053G04+           GATTC-CAAAGTCGCGAATTTGGAAACCAAAAATTGATAACAAAGGGAGGTCGAAATCCA
JMFS022F12+           GATTC-CAAAGTCGCGAATTTGGAAACCAAAAATTGATAACAAAGGGAGGTCGAAATCCA
JMFS012B08+           GATTC-CAAAGTCGCGAATTTGGAAACCAAAAATTGATAACAAAGGGAGGTCGAAATCCA
                      ____________________________________________________________
consensus             GATTC-CAAAGTCGCGAATTTGGAAACCAAAAATTGATAACAAAGGGAGGTCGAAATCCA
 
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JMFS054A12+           ATTGAAGATTGAATCTTTGAACGAGGGTTTTTACAATGGAATTGGAAACAGAGACGATAG
JMFS022G11+           ATTGAAGATTGAATCTTTGAACGAGGGTTTTTACAATGGAATTGGAAACAGAGACGATAG
JMFS090F01+           ATTGAAGATTGAATCTTTGAACGAGGGTTTTTACAATGGAATTGGAAACAGAGACGATAG
JMSF047D20+           ATTGAAGATTGAATCTTTGAACGAGGGTTTTTACAATGGAATTGGAAACAGAGACGATAG
JMFF049M21+           ATTGAAGATTGAATCTTTGAACGAGGGTTTTTACAATGGAATTGGAAACAGAGACGATAG
JMFS028H07+           ATTGAAGATTGAATCTTTGAACGAGGGTTTTTACAATGGAATTGGAAACAGAGACGATAG
JMFS053G04+           ATTGAAGATTGAATCTTTGAACGAGGGTTTTTACAATGGAATTGGAAACAGAGACGATAG
JMFS022F12+           ATTGAAGATTGAATCTTTGAACGAGGGTTTTTACAATGGAATTGGAAACAGAGACGATAG
JMFS012B08+           ATTGAAGATTGAATCTTTGAACGAGGGTTTTTACAATGGAATTGGAAACAGAGACGATAG
                      ____________________________________________________________
consensus             ATTGAAGATTGAATCTTTGAACGAGGGTTTTTACAATGGAATTGGAAACAGAGACGATAG
 
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JMFS054A12+           GGTTCGATAGAAAACAAAAATAAAAAATTAAATCTTGGATAAAGGATAGGGCTGCGGAAA
JMFS022G11+           GGTTCGATAGAAAACAAAAATAAAAAATTAAATCTTGGATAAAGGATAGGGCTGCGGAAA
JMFS090F01+           GGTTCGATAGAAAACAAAAATAAAAAATTAAATCTTGGATAAAGGATAGGGCTGCGGAAA
JMSF047D20+           GGTTCGATAGAAAACAAAAATAAAAAATTAAATCTTGGATAAAGGATAGGGCTGCGGAAA
JMFF049M21+           GGTTCGATAGAAAACAAAAATAAAAAATTAAATCTTGGATAAAGGATAGGGCTGCGGAAA
JMFS028H07+           GGTTCGATAGAAAACAAAAATAAAAAATTAAATCTTGGATAAAGGATAGGGCTGCGGAAA
JMFS053G04+           GGTTCGATAGAAAACAAAAATAAAAAATTAAATCTTGGATAAAGGATAGGGCTGCGGAAA
JMFS022F12+           GGTTCGATAGAAAACAAAAATAAAAAATTAAATCTTGGATAAAGGATAGGGCTGCGGAAA
JMFS012B08+           GGTTCGATAGAAAACAAAAATAAAAAATTAAATCTTGGATAAAGGATAGGGCTGCGGAAA
                      ____________________________________________________________
consensus             GGTTCGATAGAAAACAAAAATAAAAAATTAAATCTTGGATAAAGGATAGGGCTGCGGAAA
 
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JMFS054A12+           TGGATTCACCTGGGAAGGCAAATCGGGTCAGAAATATGGAAAATCGTTGAGCTTAATAGC
JMFS022G11+           TGGATTCACCTGGGAAGGCAAATCGGGTCAGAAATATGGAAAATCGTTGAGCTTAATAGC
JMFS090F01+           TGGATTCACCTGGGAAGGCAAATCGGGTCAGAAATATGGAAAATCGTTGAGCTTAATAGC
JMSF047D20+           TGGATTCACCTGGGAAGGCAAATCGGGTCAGAAATATGGAAAATCGTTGAGCTTAATAGC
JMFF049M21+           TGGATTCAACTGGGAAGGCAAATCGGGTCAGAAATATGGAAAATCGTTGAGCGTAATAGC
JMFS028H07+           TGGATTCACCTGGGAAGGCAAATCGGGTCAGAAATATGGAAAATCGTTGAGCTTAATAGC
JMFS053G04+           TGGATTCACCTGGGAAGGCAAATCGGGTCAGAAATATGGAAAATCGTTGAGCTTAATAGC
JMFS022F12+           TGGATTCACCTGGGAAGGCAAATCGGGTCAGAAATATGGAAAATCGTTGAGCTTAATAGC
JMFS012B08+           TGGATTCACCTGGGAAGGCAAATCGGGTCAGAAATATGGAAAATCGTTGAGCTTAATAGC
                      ____________________________________________________________
consensus             TGGATTCACCTGGGAAGGCAAATCGGGTCAGAAATATGGAAAATCGTTGAGCTTAATAGC
 
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JMFS054A12+           TCATATGTAG                                                  
JMFS090F01+           TCATATGTAGCA                                                
JMSF047D20+           TCATATGTAGCATTGGATCCACA                                     
JMFF049M21+           TCATATGTAGCATTG                                             
JMFS028H07+           TCATATGTAGCATTGGATCCACAGAAGAAATGAAATGATTGTA                 
JMFS053G04+           TCATATGTAGCATTGGATCCACAGAAGAAATGAAATGATTGTAGTAAGAGA         
JMFS022F12+           TCATATGTAGCATTGGATCCACAGAAGAAATGAAATGATTGTAGTAAGAGA         
JMFS012B08+           TCATATGTAGCATTGGATCCACAGAAGAAATGAAATGATTGTAGTAAGAGAGATAAACAG
                      ____________________________________________________________
consensus             TCATATGTAGCATTGGATCCACAGAAGAAATGAAATGATTGTAGTAAGAGAGATAAACAG