Contig 013078:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024F14Sequence463013078 (9)ref|XP_007014163.1|9e-41Calmodulin-binding protein isoform 4 [Theobroma cacao] gb|EOY31782.1| Calmodulin531004036 (7)ref|XP_010323248.1|1e-14PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101245373 [Solanum l
JMFF026J03Sequence575013078 (9)ref|XP_007014163.1|2e-91Calmodulin-binding protein isoform 4 [Theobroma cacao] gb|EOY31782.1| Calmodulin724004036 (7)ref|XP_002526232.1|7e-48calmodulin binding protein, putative [Ricinus communis] gb|EEF36173.1| calmoduli
JMFF032B02Sequence524013078 (9)ref|XP_007014160.1|8e-79Calmodulin-binding protein isoform 1 [Theobroma cacao] ref|XP_007014161.1| Calmo719004036 (7)ref|XP_002526232.1|2e-47calmodulin binding protein, putative [Ricinus communis] gb|EEF36173.1| calmoduli
JMFS011D10Sequence622013078 (9)ref|XP_011079310.1|262PREDICTED: uncharacterized protein LOC105162855 [Sesamum indicum]
JMFS079G08Sequence627013078 (9)ref|XP_007014160.1|1e-107Calmodulin-binding protein isoform 1 [Theobroma cacao] ref|XP_007014161.1| Calmo
JMFS112D02Sequence627013078 (9)ref|XP_007014163.1|5e-81Calmodulin-binding protein isoform 4 [Theobroma cacao] gb|EOY31782.1| Calmodulin
JMFS138E07Sequence620013078 (9)ref|XP_007014160.1|1e-81Calmodulin-binding protein isoform 1 [Theobroma cacao] ref|XP_007014161.1| Calmo
JMSF022H18Sequence652013078 (9)ref|XP_007014163.1|2e-113Calmodulin-binding protein isoform 4 [Theobroma cacao] gb|EOY31782.1| Calmodulin744004036 (7)ref|XP_002526232.1|6e-53calmodulin binding protein, putative [Ricinus communis] gb|EEF36173.1| calmoduli
JMSF041I17Sequence825013078 (9)ref|XP_007014163.1|3e-126Calmodulin-binding protein isoform 4 [Theobroma cacao] gb|EOY31782.1| Calmodulin632004036 (7)ref|XP_002526232.1|4e-34calmodulin binding protein, putative [Ricinus communis] gb|EEF36173.1| calmoduli

Alignment

This contig is upended


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JMSF041I17+                                            CCAACTAGAATTATCTGTAAATATCAG
                      ____________________________________________________________
consensus                                              CCAACTAGAATTATCTGTAAATATCAG
 
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JMSF041I17+           CTCTCCAAGAGTTCCAACACCTTCTTTTAGTGTTACTTGCAAATCACCAGTCAACAATGG
JMFS079G08+                                                     ATCACCAGTCAACAATGG
JMSF022H18+                                     TTAGTGTTACTTGCAAATCACCAGTCAACAATGG
                      ____________________________________________________________
consensus             CTCTCCAAGAGTTCCAACACCTTCTTTTAGTGTTACTTGCAAATCACCAGTCAACAATGG
 
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JMSF041I17+           TCTCTTGCCTTCTCGTTCTTTTACAACATGACTTTCAAATTCTTCCTGGGTCCAATCATC
JMFS079G08+           TCTCTGCCTTTCTCGTTCTTNTACAACATGACTTTCAAATTCTTCCTGGGTCCAATCATC
JMSF022H18+           TCTCTTGCCTTCTCGTTCTTTTACAACATGACTTTCAAATTCTTCCTGGGTCCAATCATC
JMFF026J03+                                                               CAATCATC
                      ____________________________________________________________
consensus             TCTCTTGCCTTCTCGTTCTTTTACAACATGACTTTCAAATTCTTCCTGGGTCCAATCATC
 
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JMSF041I17+           ATCATCTTCATTATTAAAATCACCTTCTAGCACAACAACATCCAGCTTCATACATGACTC
JMFS079G08+           ATCATCTTCATTATTAAAATCACCTTCTAGCACAACAACATCCAGCTTCATACATGACTC
JMSF022H18+           ATCATCTTCATTATTAAAATCACCTTCTAGCACAACAACATCCAGCTTCATACATGACTC
JMFF026J03+           ATCATCTTCATTATTAAAATCACCTTCTAGCACAACAACATCCAGCTTCATACATGACTC
JMFS138E07+                                       AGCACAACAACATCCAGCTTCATACATGACTC
JMFF032B02+                                                      AGCTTCATACATGACTC
JMFS112D02+                                           CAACAACATCCAGCTTCATACATGACTC
JMFS011D10+                                                 CATCCAGCTTCATACATGACTC
                      ____________________________________________________________
consensus             ATCATCTTCATTATTAAAATCACCTTCTAGCACAACAACATCCAGCTTCATACATGACTC
 
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JMSF041I17+           AGGTCCAGTTGTTACAACATGTCCACTATTAGAATCAATTAGGACAACATGGATGGCAGC
JMFS079G08+           AGGTCCAGTTGTTACAACATGTCCACTATTAGAATCAATTAGGACAACATGGATGGCAGC
JMSF022H18+           AGGTCCAGTTGTTACAACATGTCCACTATTAGAATCAATTAGGACAACATGGATGGCAGC
JMFF026J03+           AGGTCCAGTTGTTACAACATGTCCACTATTAGAATCAATTAGGACAACATGGATGGCAGC
JMFS138E07+           AGGTCCAGTTGTTACAACATGTCCACTATTAGAATCAATTAGGACAACATGGATGGCAGC
JMFF032B02+           AGGTCCAGTTGTTACAACATGTCCACTATTAGAATCAATTAGGACAACATGGATGGCAGC
JMFS112D02+           AGGTCCAGTTGTTACAACATGTCCACTATTAGAATCAATTAGGACAACATGGATGGCAGC
JMFS011D10+           AGGTCCAGTTGTTACAACATGTCCACTATTAGAATCAATTAGGACAACATGGATGGCAGC
                      ____________________________________________________________
consensus             AGGTCCAGTTGTTACAACATGTCCACTATTAGAATCAATTAGGACAACATGGATGGCAGC
 
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JMSF041I17+           ACCCTGTTCCCCTTCAACTTTACCCCCAGTAAAGAGGGGCAAGGAAAGTCTGGATCTAAA
JMFS079G08+           ACCCTGTTCCCCTTCAACTTTACCCCCAGTAAAGAGGGGCAAGGAAAGTCTGGATCTAAA
JMSF022H18+           ACCCTGTTCCCCTTCAACTTTACCCCCAGTAAAGAGGGGCAAGGAAAGTCTGGATCTAAA
JMFF026J03+           ACCCTGTTCCCCTTCAACTTTACCCCCAGTAAAGAGGGGCAAGGAAAGTCTGGATCTAAA
JMFS138E07+           ACCCTGTTCCCCTTCAACTTTACCCCCAGTAAAGAGGGGCAAGGAAAGTCTGGATCTAAA
JMFF032B02+           ACCCTGTTCCCCTTCAACTTTACCCCCAGTAAAGAGGGGCAAGGAAAGTCTGGATCTAAA
JMFS112D02+           ACCCTGTTCCCCTTCAACTTTACCCCCAGTAAAGAGGGGCAAGGAAAGTCTGGATCTAAA
JMFS011D10+           ACCCTGTTCCCCTTCAACTTTACCCCCAGTAAAGAGGGGCAAGGAAAGTCTGGATCTAAA
                      ____________________________________________________________
consensus             ACCCTGTTCCCCTTCAACTTTACCCCCAGTAAAGAGGGGCAAGGAAAGTCTGGATCTAAA
 
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JMSF041I17+           ATGAAGTTGCATGTTCCGTCCATCAGGCCCTTCAATTCGCTTAGGCGATGACCTTGCAGC
JMFS079G08+           ATGAAGTTGCATGTTCCGTCCATCAGGCCCTTCAATTCGCTTAGGCGATGACCTTGCAGC
JMSF022H18+           ATGAAGTTGCATGTTCCGTCCATCAGGCCCTTCAATTCGCTTAGGCGATGACCTTGCAGC
JMFF026J03+           ATGAAGTTGCATGTTCCGTCCATCAGGCCCTTCAATTCGCTTAGGCGATGACCTTGCAGC
JMFS138E07+           ATGAAGTTGCATGTTCCGTCCATCAGGCCCTTCAATTCGCTTAGGCGATGACCTTGCAGC
JMFF032B02+           ATGAAGTTGCATGTTCCGTCCATCAGGCCCTTCAATTCGCTTAGGCGATGACCTTGCAGC
JMFF024F14+                                             ATTCGCTTAGGCGATGACCTTGCAGC
JMFS112D02+           ATGAAGTTGCATGTTCCGTCCATCAGGCCCTTCAATTCGCTTAGGCGATGACCTTGCAGC
JMFS011D10+           ATGAAGTTGCATGTTCCGTCCATCAGGCCCTTCAATTCGCTTAGGCGATGACCTTGCAGC
                      ____________________________________________________________
consensus             ATGAAGTTGCATGTTCCGTCCATCAGGCCCTTCAATTCGCTTAGGCGATGACCTTGCAGC
 
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JMSF041I17+           AATTCTTGCAGGGCCTAACTTTGCCAAAGCTCGTTCCACTTCTTCACTAACAACTCTGCG
JMFS079G08+           AATTCTTGCAGGGCCTAACTTTGCCAAAGCTCGTTCCACTTCTTCACTAACAACTCTGCG
JMSF022H18+           AATTCTTGCAGGGCCTAACTTTGCCAAAGCTCGTTCCACTTCTTCACTAACAACTCTGCG
JMFF026J03+           AATTCTTGCAGGGCCTAACTTTGCCAAAGCTCGTTCCACTTCTTCACTAACAACTCTGCG
JMFS138E07+           AATTCTTGCAGGGCCTAACTTTGCCAAAGCTCGTTCCACTTCTTCACTAACAACTCTGCG
JMFF032B02+           AATTCTTGCAGGGCCTAACTTTGCCAAAGCTCGTTCCACTTCTTCACTAACAACTCTGCG
JMFF024F14+           AATTCTTGCAGGGCCTAACTTTGCCAAAGCTCGTTCCACTTCTTCACTAACAACTCTGCG
JMFS112D02+           AATTCTTGCAGGGCCTAACTTTGCCAAAGCTCGTTCCACTTCTTCACTAACAACTCTGCG
JMFS011D10+           AATTCTTGCAGGGCCTAACTTTGCCAAAGCTCGTTCCACTTCTTCACTAACAACTCTGCG
                      ____________________________________________________________
consensus             AATTCTTGCAGGGCCTAACTTTGCCAAAGCTCGTTCCACTTCTTCACTAACAACTCTGCG
 
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JMSF041I17+           AAGAATTGGTTCCAAGGAAGAGCACAGCTTTTGGAGACTATCCACCTTGAGAGCTTCCAC
JMFS079G08+           AAGAATTGGTTCCAAGGAAGAGCACAGCTTTTGGAGACTATCCACCTTGAGAGCTTCCAC
JMSF022H18+           AAGAATTGGTTCCAAGGAAGAGCACAGCTTTTGGAGACTATCCACCTTGAGAGCTTCCAC
JMFF026J03+           AAGAATTGGTTCCAAGGAAGAGCACAGCTTTTGGAGACTATCCACCTTGAGAGCTTCCAC
JMFS138E07+           AAGAATTGGTTCCAAGGAAGAGCACAGCTTTTGGAGACTATCCACCTTGAGAGCTTCCAC
JMFF032B02+           AAGAATTGGTTCCAAGGAAGAGCACAGCTTTTGGAGACTATCCACCTTGAGAGCTTCCAC
JMFF024F14+           AAGAATTGGTTCCAAGGAAGAGCACAGCTTTTGGAGACTATCCACCTTGAGAGCTTCCAC
JMFS112D02+           AAGAATTGGTTCCAAGGAAGAGCACAGCTTTTGGAGACTATCCACCTTGAGAGCTTCCAC
JMFS011D10+           AAGAATTGGTTCCAAGGAAGAGCACAGCTTTTGGAGACTATCCACCTTGAGAGCTTCCAC
                      ____________________________________________________________
consensus             AAGAATTGGTTCCAAGGAAGAGCACAGCTTTTGGAGACTATCCACCTTGAGAGCTTCCAC
 
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JMSF041I17+           AATAACACTAGCTAAAGCAGGTCGTTTGCGCTCCGGCTGCTGCTCCTCATCTCCTTCCAA
JMFS079G08+           AATAACACTAGCTAAAGCAGGTCGTTTGCGCTCCGGCTGCTGCTCCTCATCTCCTTCCAA
JMSF022H18+           AATAACACTAGCTAAAGCAGGTCGTTTGCGCTCCGGCTGCTGCTCCTCATCTCCTTCCAA
JMFF026J03+           AATAACACTAGCTAAAGCAGGTCGTTTGCGCTCCGGCTGCTGCTCCTCATCTCCTTCCAA
JMFS138E07+           AATAACACTAGCTAAAGCAGGTCGTTTGCGCTCCGGCTGCTGCTCCTCATCTCCTTCCAA
JMFF032B02+           AATAACACTAGCTAAAGCAGGTCGTTTGCGCTCCGGCTGCTGCTCCTCATCTCCTTCCAA
JMFF024F14+           AATAACACTAGCTAAAGCAGGTCGTTTGCGCTCCGGCTGCTGCTCCTCATCTCCTTCCAA
JMFS112D02+           AATAACACTAGCTAAAGCAGGTCGTTTGCGCTCCGGCTGCTGCTCCTCATCTCCTTCCAA
JMFS011D10+           AATAACACTAGCTAAAGCAGGTCGTTTGCGCTCCGGCTGCTGCTCCTCATCTCCTTCCAA
                      ____________________________________________________________
consensus             AATAACACTAGCTAAAGCAGGTCGTTTGCGCTCCGGCTGCTGCTCCTCATCTCCTTCCAA
 
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JMSF041I17+           ACTCCTCTTTCCTCTCATTGAGTTGGTCCTTTCCATGTACCGAGTCTGCATTCTAATCCA
JMFS079G08+           ACTCCTCTTTCCTCTCATTGAGTTGGTCCTTTCCATGTACCGAGTCTGCATTCTAATCCA
JMSF022H18+           ACTCCTCTTTCCTCTCATTGAGTTGGTCCTTTCCATGTACCGAGTCTGCATTCTAATCCA
JMFF026J03+           ACTCCTCTTTCCTCTCATTGAGTTGGTCCTTTCCATGTACCGAGTCTGCATTCTAATCCA
JMFS138E07+           ACTCCTCTTTCCTCTCATTGAGTTGGTCCTTTCCATGTACCGAGTCTGCATTCTAATCCA
JMFF032B02+           ACTCCTCTTTCCTCTCATTGAGTTGGTCCTTTCCATGTACCGAGTCTGCATTCTAATCCA
JMFF024F14+           ACTCCTCTTTCCTCTCATTGAGTTGGTCCTTTCCATGTACCGAGTCTGCATTCTAATCCA
JMFS112D02+           ACTCCTCTTTCCTCTCATTGAGTTGGTCCTTTCCATGTACCGAGTCTGCATTCTAATCCA
JMFS011D10+           ACTCCTCTTTCCTCTCATTGAGTTGGTCCTTTCCATGTACCGAGTCTGCATTCTAATCCA
                      ____________________________________________________________
consensus             ACTCCTCTTTCCTCTCATTGAGTTGGTCCTTTCCATGTACCGAGTCTGCATTCTAATCCA
 
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JMSF041I17+           CCAAACAGAAGCCCTATCCACT                                      
JMFS079G08+           CCAAACAGAAGCCCTATCCACTGATTGGTTGTTGACGTTTCCGTTGAGGTCTCCGAGGTT
JMSF022H18+           CCAAACAGAAGCC-------CTGATTGGTTGTTGACGTTTCCGTTGAGGTCTCCGAGGTT
JMFF026J03+           CCAAACAGAAGCCCTATCCACTGATTGGTTGTTGACGTTTCCGTTGAGGTCTCCGAGGTT
JMFS138E07+           CCAAACAGAAGCCCTATCCACTGATTGGTTGTTGACGTTTCCGTTGAGGTCTCCGAGGTT
JMFF032B02+           CCAAACAGAAGCCCTATCCACTGATTGGTTGTTGACGTTTCCGTTGAGGTCTCCGAGGTT
JMFF024F14+           CCAAACAGAAGCCCTATCCACT                                      
JMFS112D02+           CCAAACAGAAGCCCTATCCACTGATTGGTTGTTGACGTTTCCGTTGAGGTCTCCGAGGTT
JMFS011D10+           CCAAACAGAAGCCCTATCCACTGATTGGTTGTTGACGTTTCCGTTGAGGTCTCCGAGGTT
                      ____________________________________________________________
consensus             CCAAACAGAAGCCCTATCCACTGATTGGTTGTTGACGTTTCCGTTGAGGTCTCCGAGGTT
 
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JMFS079G08+           TCCCTCTGT                                                   
JMSF022H18+           TCCCTCTGTGTCTCTCTCTCTCTC                                    
JMFF026J03+           TCCCTCTGTGTCTCTCTCTCTCTCAAC                                 
JMFS138E07+           TCCCTCTGTGTCTCTCTCTCTCTCAACAGCTCAGAGTAACGCTTCAGTGCTCTTATTGGG
JMFF032B02+           TCCCTCTGTGTCTCTCTCTCTCTC                                    
JMFS112D02+           TCCCTCTGTGTCTCTCTCTCTCTCAACAGCTCAGAGTAACGCTTCAGTGCTCTTATTGGG
JMFS011D10+           TCCCTCTGTGTCTCTCTCTCTCTCAACAGCTCAGAGTAACGCTTCAGTGCTCTTATTGGG
                      ____________________________________________________________
consensus             TCCCTCTGTGTCTCTCTCTCTCTCAACAGCTCAGAGTAACGCTTCAGTGCTCTTATTGGG
 
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JMFS138E07+           CGGCCCAGAGGGGTGGTGAACGCGCGTGGGGGTGGCGCGTGGGTTGCA            
JMFS112D02+           CGGCCCAGAGGGGTGGTGAACGCGCGTGGGGGTGGCGCGTGGGTTGCAGCTAGTCTCGA 
JMFS011D10+           CGGCCCAGAGGGGTGGTGAACGCGCGTGGGGGTGGCGCGTGGGTTGCAGCTAGTCTCGAC
                      ____________________________________________________________
consensus             CGGCCCAGAGGGGTGGTGAACGCGCGTGGGGGTGGCGCGTGGGTTGCAGCTAGTCTCGAC