Contig 013074:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019G15Sequence539013577 (22)emb|CDP00977.1|9e-96unnamed protein product [Coffea canephora]684013074 (4)emb|CAD10147.1|3e-107phosphoenolpyruvate carboxylase [Cucumis sativus]
JMFF023O22Sequence430013577 (22)ref|XP_011098224.1|9e-44PREDICTED: phosphoenolpyruvate carboxylase [Sesamum indicum]708013074 (4)emb|CAD10147.1|9e-108phosphoenolpyruvate carboxylase [Cucumis sativus]
JMFS003C06Sequence398013074 (4)emb|CAA96505.1|6e-24phosphoenolpyruvate carboxylase [Flaveria pringlei]
JMSF051J06Sequence675013577 (22)ref|XP_010108239.1|1e-87Phosphoenolpyruvate carboxylase, housekeeping isozyme [Morus notabilis] gb|EXC1755013074 (4)emb|CAD10147.1|8e-118phosphoenolpyruvate carboxylase [Cucumis sativus]

Alignment

This contig is upended


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rJMSF051J06+                                     TTCCATGGATTTTGCGTGGACGCAAACCAGGTT
                      ____________________________________________________________
consensus                                        TTCCATGGATTTTGCGTGGACGCAAACCAGGTT
 
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rJMSF051J06+          CCACCTCCCCGTTNGGCTAGGTGTTGGTGCAGCGTTCAAATGTGCTATCCAAAAGGACAT
rJMFF023O22+                           TAGGTGTTGGTGCAGCGTTCAAATGTGCTATCCAAAAGGACAT
rJMFF019G15+                           TAGGTGTTGGTGCAGCGTTCAAATGTGCTATCCAAAAGGACAT
                      ____________________________________________________________
consensus             CCACCTCCCCGTTNGGCTAGGTGTTGGTGCAGCGTTCAAATGTGCTATCCAAAAGGACAT
 
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rJMSF051J06+          CAAGAACCTCAAAATGTTTCAGGAAATGTACAACGAATGGCCATTCTTTCGGGTCACCAT
rJMFF023O22+          CAAGAACCTCAAAATGTTTCAGGAAATGTACAACGAATGGCCATTCTTTCGGGTCACCAT
rJMFF019G15+          CAAGAACCTCAAAATGTTTCAGGAAATGTACAACGAATGGCCATTCTTTCGGGTCACCAT
                      ____________________________________________________________
consensus             CAAGAACCTCAAAATGTTTCAGGAAATGTACAACGAATGGCCATTCTTTCGGGTCACCAT
 
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rJMSF051J06+          TGATTTGGTAGAAATGGTGTTCGCCAAGGGAGATCCAGGGATAGCTGCACTGTACGACAA
rJMFF023O22+          TGATTTGGTAGAAATGGTGTTCGCCAAGGGAGATCCAGGGATAGCTGCACTGTACGACAA
rJMFF019G15+          TGATTTGGTAGAAATGGTGTTCGCCAAGGGAGATCCAGGGATAGCTGCACTGTACGACAA
                      ____________________________________________________________
consensus             TGATTTGGTAGAAATGGTGTTCGCCAAGGGAGATCCAGGGATAGCTGCACTGTACGACAA
 
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rJMSF051J06+          GCTTCTCGTCTCAAAGGATTTATGGTCATTTGGCGAGCGCTTGAGGTCCAACTACGAGGA
rJMFF023O22+          GCTTCTCGTCTCAAAGGATTTATGGTCATTTGGCGAGCGCTTGAGGTCCAACTACGAGGA
rJMFF019G15+          GCTTCTCGTCTCAAAGGATTTATGGTCATTTGGCGAGCGCTTGAGGTCCAACTACGAGGA
                      ____________________________________________________________
consensus             GCTTCTCGTCTCAAAGGATTTATGGTCATTTGGCGAGCGCTTGAGGTCCAACTACGAGGA
 
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rJMSF051J06+          CACAAAGAGCCTTCTCCTACAGATTGCTGGACATAAGGATCTTCTCGAGGGAGATCCCTA
rJMFF023O22+          CACAAAGAGCCTTCTCCTACAGATTGCTGGACATAAGGATCTTCTCGAGGGAGATCCCTA
rJMFF019G15+          CACAAAGAGCCTTCTCCTACAGATTGCTGGACATAAGGATCTTCTCGAGGGAGATCCCTA
                      ____________________________________________________________
consensus             CACAAAGAGCCTTCTCCTACAGATTGCTGGACATAAGGATCTTCTCGAGGGAGATCCCTA
 
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rJMSF051J06+          CTTGAAACAGCAACTCAAGCTTCGCGATTCCTACATAACAACCTTAAATGTCTGTCAAGC
rJMFF023O22+          CTTGAAACAGCAACTCAAGCTTCGCGATTCCTACATAACAACCTTAAATGTCTGTCAAGC
rJMFF019G15+          CTTGAAACAGCAACTCAAGCTTCGCGATTCCTACATAACAACCTTAAATGTCTGTCAAGC
                      ____________________________________________________________
consensus             CTTGAAACAGCAACTCAAGCTTCGCGATTCCTACATAACAACCTTAAATGTCTGTCAAGC
 
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rJMSF051J06+          TTACACCCTGAAACGCATTCGTGACCCAGACTACCATGTCACCCTGAGGCCCCACATCAG
rJMFF023O22+          TTACACCCTGAAACGCATTCGTGACCCAGACTACCATGTCACCCTGAGGCCCCACATCAG
rJMFF019G15+          TTACACCCTGAAACGCATTCGTGACCCAGACTACCATGTCACCCTGAGGCCCCACATCAG
JMFS003C06+                                 GACCCAGACTACCATGTCACCCTGAGGCCCCACATCAG
                      ____________________________________________________________
consensus             TTACACCCTGAAACGCATTCGTGACCCAGACTACCATGTCACCCTGAGGCCCCACATCAG
 
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rJMSF051J06+          CAAAGACTATGTCGATTCCAAGCATGCTGATGAGCTCGTGAAGCTGAACCCAACGAGCGA
rJMFF023O22+          CAAAGACTATGTCGATTCCAAGCATGCTGATGAGCTCGTGAAGCTGAACCCAACGAGCGA
rJMFF019G15+          CAAAGACTATGTCGATTCCAAGCATGCTGATGAGCTCGTGAAGCTGAACCCAACGAGCGA
JMFS003C06+           CAAAGACTATGTCGATTCCAAGCATGCTGATGAGCTCGTGAAGCTGAACCCAACGAGCGA
                      ____________________________________________________________
consensus             CAAAGACTATGTCGATTCCAAGCATGCTGATGAGCTCGTGAAGCTGAACCCAACGAGCGA
 
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rJMSF051J06+          TTATGCCCCCGGGTTGGAGGACACCCTCATCTTGACCATGAAGGGTATTGCTGCTGGAAT
rJMFF023O22+          TTATGCCCCCGGGTTGGAGGACACCCTCATCTTGACCATGAAGGGTATTGCTGCTGGAAT
rJMFF019G15+          TTATGCCCCCGGGTTGGAGGACACCCTCATCTTGACCATGAAGGGTATTGCTGCTGGAAT
JMFS003C06+           TTATGCCCCCGGGTTGGAGGACACCCTCATCTTGCCCATGAAGGGTATTGCTGCTGGAAT
                      ____________________________________________________________
consensus             TTATGCCCCCGGGTTGGAGGACACCCTCATCTTGACCATGAAGGGTATTGCTGCTGGAAT
 
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rJMSF051J06+          GCAGAATACAGGTTAAGCT                                         
rJMFF023O22+          GCAGAATACAGGTTAAGCT                                         
rJMFF019G15+          GCAGAATACAGGTTAAGCTACTTTTGTTTTTTTCCAGTTGTTTTCTGGTATAAATAACAG
JMFS003C06+           GCAGAATACAGGTTAAGCTACTTTTGTTTTTTTCCAGTTGTTTTCTGGTATAAATAACAA
                      ____________________________________________________________
consensus             GCAGAATACAGGTTAAGCTACTTTTGTTTTTTTCCAGTTGTTTTCTGGTATAAATAACAG
 
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rJMFF019G15+          ATGCTGTTCCTCGTCTGATTGATGAATGTTTATCAGATAATGTACTATTAAACCGCCCGG
JMFS003C06+           ATGCTGTTCCTCGTCTGATTGATGAATGTTTATCAGATAATGTACTATTCACCCCCCCGG
                      ____________________________________________________________
consensus             ATGCTGTTCCTCGTCTGATTGATGAATGTTTATCAGATAATGTACTATTCACCCGCCCGG
 
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rJMFF019G15+          TAGAAAGCGCAACGCTTTGCTAGCATGTAATAACTATATAC                   
JMFS003C06+           TAGAAAGCGCAACGCTTTGCTAGCATGTAATAACTATATACTGAGAGTATTTGCTGAAGA
                      ____________________________________________________________
consensus             TAGAAAGCGCAACGCTTTGCTAGCATGTAATAACTATATACTGAGAGTATTTGCTGAAGA
 
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JMFS003C06+           ATTAAATGGTTTTGGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCGGGACTAGTTCTC
                      ____________________________________________________________
consensus             ATTAAATGGTTTTGGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGGGACTAGTTCTC