Contig 013073:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002C10Sequence379013073 (4)721009795 (3)ref|XP_010067742.1|3e-100PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Eucalyptus grandis] gb|KCW6
JMFF044N03Sequence642013073 (4)ref|XP_004143754.1|8e-52PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Cucumis sativus] ref|XP_0041631009795 (3)ref|XP_008245586.1|8e-61PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Prunus mume]
JMFS001F10Sequence627013073 (4)ref|XP_004143754.1|3e-46PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Cucumis sativus] ref|XP_0041
JMSF040G05Sequence683013073 (4)ref|XP_004233165.1|3e-73PREDICTED: E3 ubiquitin-protein ligase SINAT5 isoform X1 [Solanum lycopersicum]892009795 (3)gb|KDP40517.1|2e-132hypothetical protein JCGZ_24516 [Jatropha curcas]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF040G05+ TGTAGTAAGGATAGATCCCCATGCACCCAAAGTCCTGA
                      ____________________________________________________________
consensus TGTAGTAAGGATAGATCCCCATGCACCCAAAGTCCTGA
 
. : . : . : . : . : . :
JMSF040G05+ TATTTACAAGGGAGCTCAAGAGATGCAGCAACCTTCTCCAAAGCAAGACATCTAATATTA
JMFF044N03+ AATATTA
                      ____________________________________________________________
consensus TATTTACAAGGGAGCTCAAGAGATGCAGCAACCTTCTCCAAAGCAAGACATCTAATATTA
 
. : . : . : . : . : . :
JMSF040G05+ CCAAGCTCATGCCTGCAAGTTGGGCAGCGGTTGTGTACCCTGGGCTTGCAACCAGAACAC
JMFF044N03+ CCAAGCTCATGCCTGCAAGTTGGGCAGCGGTTGTGTACCCTGGGCTTGCAACCAGAACAC
JMFS001F10+ TGCAAGTTGGGCAGCGGTTGTGTACCCTGGGCTTGCAACCAGAACAC
                      ____________________________________________________________
consensus CCAAGCTCATGCCTGCAAGTTGGGCAGCGGTTGTGTACCCTGGGCTTGCAACCAGAACAC
 
. : . : . : . : . : . :
JMSF040G05+ AATGTGTGACCATTGCAACACTGATGAATTGGTGGATACATGGCATTTAGGCACACCGGG
JMFF044N03+ AATGTGTGACCATTGCAACACTGATGAATTGGTGGATACATGGCATTTAGGCACACCGGG
JMFS001F10+ AATGTGTGACCATTGCAACACTGATGAATTGGTGGATACATGGCATTTAGGCACACCGGG
                      ____________________________________________________________
consensus AATGTGTGACCATTGCAACACTGATGAATTGGTGGATACATGGCATTTAGGCACACCGGG
 
. : . : . : . : . : . :
JMSF040G05+ CATTCCAACAGTTCACGAACATTGCTAGAAACAGTTACATTAGGTTTTAGAGTATTCTGC
JMFF044N03+ CATTCCAACAGTTCACGAACATTGCTAGAAACAGTTACATTAGGTTTTAGAGTATTCTGC
JMFS001F10+ CATTCCAACAGTTCACGAACATTGCTAGAAACAGTTACATTAGGTTTTAGAGTATTCTGC
                      ____________________________________________________________
consensus CATTCCAACAGTTCACGAACATTGCTAGAAACAGTTACATTAGGTTTTAGAGTATTCTGC
 
. : . : . : . : . : . :
JMSF040G05+ ATAGGCTCACTGGAAAGTTCACCAACATCCATTGAGTCTTCATCTTGTGGAGGATCAATG
JMFF044N03+ ATAGGCTCACTGGAAAGTTCACCAACATCCATTGAGTCTTCATCTTGTGGAGGATCAATG
JMFS001F10+ ATAGGCTCACTGGAAAGTTCACCAACATCCATTGAGTCTTCATCTTGTGGAGGATCAATG
                      ____________________________________________________________
consensus ATAGGCTCACTGGAAAGTTCACCAACATCCATTGAGTCTTCATCTTGTGGAGGATCAATG
 
. : . : . : . : . : . :
JMSF040G05+ ACCTCAGGTTTACATCGGATATCATCAAAATAAGGACTTCCCGTTGCCATTGATATTAAT
JMFF044N03+ ACCTCAGGTTTACATCGGATATCATCAAAATAAGGACTTCCCGTTGCCATTGATATTAAT
JMFS001F10+ ACCTCAGGTTTACATCGGATATCATCAAAATAAGGACTTCCCGTTGCCATTGATATTAAT
                      ____________________________________________________________
consensus ACCTCAGGTTTACATCGGATATCATCAAAATAAGGACTTCCCGTTGCCATTGATATTAAT
 
. : . : . : . : . : . :
JMSF040G05+ TGCTAATATAGTGATTGGTCCCTCCCTGAACACGTCACCTGTGTTAGTGTCTCGTCACAA
JMFF002C10+ CGTCACAA
JMFF044N03+ TGCTAATATAGTGATTGGTCCCTCCCTGAACACGTCACCTGTGTTAGTGTCTCGTCACAA
JMFS001F10+ TGCTAATATAGTGATTGGTCCCTCCCTGAACACG--------------------TCACAA
                      ____________________________________________________________
consensus TGCTAATATAGTGATTGGTCCCTCCCTGAACACGTCACCTGTGTTAGTGTCTCGTCACAA
 
. : . : . : . : . : . :
JMSF040G05+ TGGAAATGGCACACTGAGGTTCAAAGAAGAGTCGCAACAGATCTAGACCATTCCATTCCG
JMFF002C10+ TGGAAATGGCACACTGAGGTTCAAAGAAGAGTCGCAACAGATCTAGACCATTCCATTCCG
JMFF044N03+ TGGAAATGGCACACTGAGGTTCAAAGAAGAGTCGCAACAGATCTAGACCATTCCATTCCG
JMFS001F10+ TGGAAATGGCACACTGAGGTTCAAAGAAGAGTCGCAACAGATCTAGACCATTCCATTCCG
                      ____________________________________________________________
consensus TGGAAATGGCACACTGAGGTTCAAAGAAGAGTCGCAACAGATCTAGACCATTCCATTCCG
 
. : . : . : . : . : . :
JMSF040G05+ AAAACGACAACCGCCGTCCAACACGAAAAGAAAAACCATTCCAATCGGAGGAGGAGAAAC
JMFF002C10+ AAAACGACAACCGCCGTCCAACACGAAAAGAAAAACCATTCCAATCGGAGGAGGAGAAAC
JMFF044N03+ AAAACGACAACCGCCGTCCAACACGAAAAGAAAAACCATTCCAATCGGAGGAGGAGAAAC
JMFS001F10+ AAAACGACAACCGCCGTCCAACACGAAAAGAAAAACCATTCCAATCGGAGGAGGAGAAAC
                      ____________________________________________________________
consensus AAAACGACAACCGCCGTCCAACACGAAAAGAAAAACCATTCCAATCGGAGGAGGAGAAAC
 
. : . : . : . : . : . :
JMSF040G05+ CCTAAGAAGAAGCCAGGCGGCAGGGAGGCACTATCAGCTCTGCAAACTCAAAAGATGGAG
JMFF002C10+ CCTAAGAAGAAGCCAGGCGGCAGGGAGGCACTATCAGCTCTGCAAACTCAAAAGATGGAG
JMFF044N03+ CCTAAGAAGAAGCCAGGCGGCAGGGAGGCACTATCAGCTCTGCAAACTCAAAAGATGGAG
JMFS001F10+ CCTAAGAAGAAGCCAGGCGGCAGGGAGGCACTATCAGCTCTGCAAACTCAAAAGATGGAG
                      ____________________________________________________________
consensus CCTAAGAAGAAGCCAGGCGGCAGGGAGGCACTATCAGCTCTGCAAACTCAAAAGATGGAG
 
. : . : . : . : . : . :
JMSF040G05+ ACAGAAATGATAGGGATACATGAAATGGTGATTTGAAGAGGAG
JMFF002C10+ ACAGAAATGATAGGGATACATGAAATGGTGATTTGAAGAGGAGCAAATGATGGTGTAGTG
JMFF044N03+ ACAGAAATGATAGGGATACATGAAATGGTGATTTGAAGAGGAGCAAATGATGGTGTAGTG
JMFS001F10+ ACAGAAATGATAGGGATACATGAAATGGTGATTTGAAGAGGAGCAAATGATGGTGTAGTG
                      ____________________________________________________________
consensus ACAGAAATGATAGGGATACATGAAATGGTGATTTGAAGAGGAGCAAATGATGGTGTAGTG
 
. : . : . : . : . : . :
JMFF002C10+ AGGAGAGATTTGAGGAGCAGAAAAGGGGGATTTC
JMFF044N03+ AGGAGAGATTTGAGGAGCAGAAAAGGGGGATTTC
JMFS001F10+ AGGAGAGATTTGAGGAGCAGAAAAGGGGGATTTCAATTTTCAAAATAAAGGCGTGTCCTT
                      ____________________________________________________________
consensus AGGAGAGATTTGAGGAGCAGAAAAGGGGGATTTCAATTTTCAAAATAAAGGCGTGTCCTT