Contig 013069:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN025G12Sequence504013069 (3)
JMFN029D02Sequence492013069 (3)
JMFN046K05Sequence453013069 (3)

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN029D02+              AAATAAAAAGATGTTTGTATATTTTATTTTTTAATAAAAGCAAATACTTGTGCATGA
JMFN025G12+              AAATAAAAAGATGTTTGTATATTTTATTTTTTAATAAAAGCAAATACTTGTGCATGA
                      ____________________________________________________________
consensus                AAATAAAAAGATGTTTGTATATTTTATTTTTTAATAAAAGCAAATACTTGTGCATGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN029D02+           CAAGTCCATAAATTACAACGAAGTTATAATACAAAATGGAAGAACATTAGTCTCGAAAGG
JMFN025G12+           CAAGTCCATAAATTACAACGAAGTTATAATACAAAATGGAAGAACATTAGTCTCGAAAGG
JMFN046K05+                                      AATACAAAATGGAAGAACATTAGTCTCGAAAGG
                      ____________________________________________________________
consensus             CAAGTCCATAAATTACAACGAAGTTATAATACAAAATGGAAGAACATTAGTCTCGAAAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN029D02+           GATGAAGCATAACAAGGCTATAATACAAGGTTGAGAGGCATCAATTCCAATCTTAATTTT
JMFN025G12+           GATGAAGCATAACAAGGCTATAATACAAGGTTGAGAGGCATCAATTCCAATCTTAATTTT
JMFN046K05+           GATGAAGCATAACAAGGCTATAATACAAGGTTGAGAGGCATCAATTCCAATCTTAATTTT
                      ____________________________________________________________
consensus             GATGAAGCATAACAAGGCTATAATACAAGGTTGAGAGGCATCAATTCCAATCTTAATTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN029D02+           CTTGCTAATACTCTCGTGGTCGAGCTTTAGGCTTCTCTGATTTTATGAAATTTTGGAAAA
JMFN025G12+           CTTGCTAATACTCTCGTGGTCGAGCTTTAGGCTTCTCTGATTTTATGAAATTTTGGAAAA
JMFN046K05+           CTTGCTAATACTCTCGTGGTCGAGCTTTAGGCTTCTCTGATTTTATGAAATTTTGGAAAA
                      ____________________________________________________________
consensus             CTTGCTAATACTCTCGTGGTCGAGCTTTAGGCTTCTCTGATTTTATGAAATTTTGGAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN029D02+           TAAAACCAAGAAAAGGTATACTAAATCAAAAGTAGAGGATAAAGGAAGAAGAATGTTGAG
JMFN025G12+           TAAAACCAAGAAAAGGTATACTAAATCAAAAGTAGAGGATAAAGGAAGAAGAATGTTGAG
JMFN046K05+           TAAAACCAAGAAAAGGTATACTAAATCAAAAGTAGAGGATAAAGGAAGAAGAATGTTGAG
                      ____________________________________________________________
consensus             TAAAACCAAGAAAAGGTATACTAAATCAAAAGTAGAGGATAAAGGAAGAAGAATGTTGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN029D02+           AAGAGGATGAAGAATAGCGAGGTGTTGATGAGAGGAAAGAAGGACGCCTGGTGGGGACAA
JMFN025G12+           AAGAGGATGAAGAATAGCGAGGTGTTGATGAGAGGAAAGAAGGACGCCTGGTGGGGACAA
JMFN046K05+           AAGAGGATGAAGAATAGCGAGGTGTTGATGAGAGGAAAGAAGGACGCCTGGTGGGGACAA
                      ____________________________________________________________
consensus             AAGAGGATGAAGAATAGCGAGGTGTTGATGAGAGGAAAGAAGGACGCCTGGTGGGGACAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN029D02+           TAATAAGTAGAATTTGGTCTGTCATCCTCCCCATCACCATTCCCCACTCTGCAACTAACT
JMFN025G12+           TAATAAGTAGAATTTGGTCTGTCATCCTCCCAATCACCATTCCCCACTCTGCAACTAACT
JMFN046K05+           TAATAAGTAGAATTTGGTCTGTCATCCTCCCCATCACCATTCCCCACTCTGCAACTAACT
                      ____________________________________________________________
consensus             TAATAAGTAGAATTTGGTCTGTCATCCTCCCCATCACCATTCCCCACTCTGCAACTAACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN029D02+           CCACCATCTTCCCCACTTTCATCATCTTTCTTTTCCGGTAAGATTCCGGCGGCCGGCGGC
JMFN025G12+           CCACCATCTTCCCCACTTTCATCATCTTTCTTTTCCGGTAAGATTCCGGCGGCCGGCGGC
JMFN046K05+           CCACCATCTTCCCCACTTTCATCATCTTTCTTTTCCGGTAAGATTCCGGCGGCCGGCGGC
                      ____________________________________________________________
consensus             CCACCATCTTCCCCACTTTCATCATCTTTCTTTTCCGGTAAGATTCCGGCGGCCGGCGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN029D02+           CTCTCCGCTAATCAC                                             
JMFN025G12+           CTCTCCGCTAATCACGTCACAAATGGC                                 
JMFN046K05+           CTCTCCGCTAATCACGTCACAAATGGCTGAGAAAGCTCAATACTATAGAGATGGAGTACA
                      ____________________________________________________________
consensus             CTCTCCGCTAATCACGTCACAAATGGCTGAGAAAGCTCAATACTATAGAGATGGAGTACA