Contig 013065:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN036P10Sequence493013065 (2)ref|XP_009798302.1|1e-33PREDICTED: CASP-like protein 5C1 [Nicotiana sylvestris]
JMFN043H23Sequence616013065 (2)ref|XP_009798302.1|4e-38PREDICTED: CASP-like protein 5C1 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN043H23+ AAGCCCAATCTCCTAA
                      ____________________________________________________________
consensus AAGCCCAATCTCCTAA
 
. : . : . : . : . : . :
JMFN036P10+ AAGTAGTATTCCTGGCTGGCGAATTGGGCACTTGACAAATACAGAATAGCC
JMFN043H23+ AATGATCACAAGTAGTATTCCTGGCTGGCGAATTGGGCACTTGACAAATACAGAATAGCC
                      ____________________________________________________________
consensus AATGATCACAAGTAGTATTCCTGGCTGGCGAATTGGGCACTTGACAAATACAGAATAGCC
 
. : . : . : . : . : . :
JMFN036P10+ ATCAACCAGGGCCAGAGTGACGCTCCAGGGAATGACCAGTCCCATGATTGTGACCAAGAA
JMFN043H23+ ATCAACCAGGGCCAGAGTGACGCTCCAGGGAATGACCAGTCCCATGATTGTGACCAAGAA
                      ____________________________________________________________
consensus ATCAACCAGGGCCAGAGTGACGCTCCAGGGAATGACCAGTCCCATGATTGTGACCAAGAA
 
. : . : . : . : . : . :
JMFN036P10+ GCAAAAGGCAGTGTAGCTGTAGAACTCCACCCCTAAAGACATGAAGAGAAGAGAGGCAGA
JMFN043H23+ GCAAAAGGCAGTGTAGCTGTAGAACTCCACCCCTAAAGACATGAAGAGAAGAGAGGCAGA
                      ____________________________________________________________
consensus GCAAAAGGCAGTGTAGCTGTAGAACTCCACCCCTAAAGACATGAAGAGAAGAGAGGCAGA
 
. : . : . : . : . : . :
JMFN036P10+ AGAAAAAGCAGCCTGGCCCAATCTCAAAGCAAAGCTGGCACTTGTTCCCACAGCTCCAGG
JMFN043H23+ AGAAAAAGCAGCCTGGCCCAATCTCAAAGCAAAGCTGGCACTTGTTCCCACAGCTCCAGG
                      ____________________________________________________________
consensus AGAAAAAGCAGCCTGGCCCAATCTCAAAGCAAAGCTGGCACTTGTTCCCACAGCTCCAGG
 
. : . : . : . : . : . :
JMFN036P10+ TATATCATCATTCATAGCCATATATACTCACTGCTCAGCTCGATCAACCTTAATTGATTG
JMFN043H23+ TATATCATCATTCATAGCCATATATACTCACTGCTCAGCTCGATCAACCTTAATTGATTG
                      ____________________________________________________________
consensus TATATCATCATTCATAGCCATATATACTCACTGCTCAGCTCGATCAACCTTAATTGATTG
 
. : . : . : . : . : . :
JMFN036P10+ TGGGTATTGTATGTGCAGACAAAAACAGATGTACTGGTCCCTCTCCTGGCCAATTTCACG
JMFN043H23+ TGGGTATTGTATGTGCAGACAAAAACAGATGTACTGGTCCCTCTCCTGGCCAATTTCACG
                      ____________________________________________________________
consensus TGGGTATTGTATGTGCAGACAAAAACAGATGTACTGGTCCCTCTCCTGGCCAATTTCACG
 
. : . : . : . : . : . :
JMFN036P10+ ACGGACCTCCAATACAAAGTGAAAAATCTTGGCTGCAAATCGCCCCCCCCACCATACTTT
JMFN043H23+ ACGGACCTCCAATACAAAGTGAAAAATCTTGGCTGCAAATCGAAAAACACACCATACTTT
                      ____________________________________________________________
consensus ACGGACCTCCAATACAAAGTGAAAAATCTTGGCTGCAAATCGCCCCCCCCACCATACTTT
 
. : . : . : . : . : . :
JMFN036P10+ TCAAGTAATATCTCATCAGCAGTCTAGAAGTTGATGAAATCCTGCGAGTTTCAGAGGATT
JMFN043H23+ TCAAGTAATATCTCATCAGCAGTCTAGAAGTTGATGAAATCCTGCGAGTTTCAGAGGATT
                      ____________________________________________________________
consensus TCAAGTAATATCTCATCAGCAGTCTAGAAGTTGATGAAATCCTGCGAGTTTCAGAGGATT
 
. : . : . : . : . : . :
JMFN036P10+ CTCGTGCAACCTGGCTGTCAAA
JMFN043H23+ CTCGTGCAACCTGGCTGTCAAAGAAAGATGTTAATGGACCCTTTAATCCCTCTCCTCTCC
                      ____________________________________________________________
consensus CTCGTGCAACCTGGCTGTCAAAGAAAGATGTTAATGGACCCTTTAATCCCTCTCCTCTCC
 
. : . : . : . : . : . :
JMFN043H23+ TCTCCTCTGCCCTTTATTCTGTCGGTATATGCTATGAGAAAGAGTTGGTAAATGAAAGGA
                      ____________________________________________________________
consensus TCTCCTCTGCCCTTTATTCTGTCGGTATATGCTATGAGAAAGAGTTGGTAAATGAAAGGA