| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001B07 | Sequence | 563 | 013062 (5) | ref|XP_009351524.1| | 1e-59 | PREDICTED: protein PLANT CADMIUM RESISTANCE 2-like isoform X1 [Pyrus x bretschn | 648 | 013062 (5) | gb|EYU30102.1| | 9e-82 | hypothetical protein MIMGU_mgv1a024272mg, partial [Erythranthe guttata] |
| JMFN042M10 | Sequence | 540 | 013062 (5) | ref|XP_011070591.1| | 2e-64 | PREDICTED: protein PLANT CADMIUM RESISTANCE 2-like [Sesamum indicum] | |||||
| JMSF052O12 | Sequence | 621 | 013062 (5) | gb|AHW50668.1| | 3e-79 | cadmium resistance protein 2 [Nicotiana tabacum] | 746 | 013062 (5) | gb|AHW50668.1| | 2e-81 | cadmium resistance protein 2 [Nicotiana tabacum] |
This contig is upended
. : . : . : . : . : . :
JMFF001B07- AGTGCTTAAATACTTGAGAATTTCT
____________________________________________________________
consensus AGTGCTTAAATACTTGAGAATTTCT
. : . : . : . : . : . :
JMFF001B07- GCTAACTTTGTTATCCAAAATTCCAATTCATAAAAACAAAATACTTTTCAATCTTCCATA
JMSF052O12- GTTATCCAAAATTCCAATTCATAAAAACAAAATACTTTTCAATCTTCCATA
rJMSF052O12+ GTTATCCAAAATTCCAATTCATAAAAACAAAATACTTTTCAATCTTCCATA
____________________________________________________________
consensus GCTAACTTTGTTATCCAAAATTCCAATTCATAAAAACAAAATACTTTTCAATCTTCCATA
. : . : . : . : . : . :
JMFF001B07- GCCATGAATTCTTCTTCAGCTTCATCTGACTACCACAAATTCACACCGTCGCCGTACGGC
JMSF052O12- GCCATGAATTCTTCTTCAGCTTCATCTGACTACCACAAATTCACACCGTCGCCGTACGGC
rJMSF052O12+ GCCATGAATTCTTCTTCAGCTTCATCTGACTACCACAAATTCACACCGTCGCCGTACGGC
____________________________________________________________
consensus GCCATGAATTCTTCTTCAGCTTCATCTGACTACCACAAATTCACACCGTCGCCGTACGGC
. : . : . : . : . : . :
JMFF001B07- GACGGCGTGAAGACCGGCGTGCCGGTGAGCTCGTCGTCGACGACCAGCCATGCCTACAGT
JMSF052O12- GACGGCGTGAAGACCGGCGTGCCGGTGAGCTCGTCGTCGACGACCAGCCATGCCTACAGT
rJMSF052O12+ GACGGCGTGAAGACCGGCGTGCCGGTGAGCTCGTCGTCGACGACCAGCCATGCCTACAGT
____________________________________________________________
consensus GACGGCGTGAAGACCGGCGTGCCGGTGAGCTCGTCGTCGACGACCAGCCATGCCTACAGT
. : . : . : . : . : . :
JMFF001B07- TCCGAGGGCTCTCATATTGCGCCCAACCTGCAAGTTAAGCCTAAGATCCGCGGCCCCTGG
JMSF052O12- TCCGAGGGCTCTCATATTGCGCCCAACCTGCAAGTTAAGCCTAAGATCCGCGGCCCCTGG
rJMSF052O12+ TCCGAGGGCTCTCATATTGCGCCCAACCTGCAAGTTAAGCCTAAGATCCGCGGCCCCTGG
rJMFF001B07+ CTCTCATATTGCGCCCAACNTGCAAGTTAAGCCTAAGATCCGCGGCCCNTGG
____________________________________________________________
consensus TCCGAGGGCTCTCATATTGCGCCCAACCTGCAAGTTAAGCCTAAGATCCGCGGCCCCTGG
. : . : . : . : . : . :
JMFF001B07- TCGACCGGCCTATGCGACTGTTTCTCTGACCCCCGTAACTGTTGTATAACTTTGTGGTGT
JMSF052O12- TCGACCGGCCTATGCGACTGTTTCTCTGACCCCCGTAACTGTTGTATAACTTTGTGGTGT
rJMSF052O12+ TCGACCGGCCTATGCGACTGTTTCTCTGACCCCCGTAACTGTTGTATAACTTTGTGGTGT
rJMFF001B07+ TCGACCGGCCTATGCGACTGTTTCTCTGACCCCCGTAACTGTTGTATAACTTTGTGGTGT
____________________________________________________________
consensus TCGACCGGCCTATGCGACTGTTTCTCTGACCCCCGTAACTGTTGTATAACTTTGTGGTGT
. : . : . : . : . : . :
JMFF001B07- CCGTGCATCACTTTTGGACAGATTGCTGAGATTGTAGACAAGGGTTCTAATTCTTGCGGA
JMSF052O12- CCGTGCATCACTTTTGGACAGATTGCTGAGATTGTAGACAAGGGTTCTAATTCTTGCGGA
rJMSF052O12+ CCGTGCATCACTTTTGGACAGATTGCTGAGATTGTAGACAAGGGTTCTAATTCTTGCGGA
rJMFF001B07+ CCGTGCATCACTTTTGGACAGATTGCTGAGATTGTAGACAAGGGTTCTAATTCTTGCGGA
JMFN042M10+ CCGTGCATCACTTTTGGACAGATTGCTGAGATTGTAGACAAGGGTTCTAATTCTTGCGGA
____________________________________________________________
consensus CCGTGCATCACTTTTGGACAGATTGCTGAGATTGTAGACAAGGGTTCTAATTCTTGCGGA
. : . : . : . : . : . :
JMFF001B07- GTGAATGGAGCCCTTTATACAATTTTAGCTTGTGTGACTGGTTTCCCATGCTGCTACTCA
JMSF052O12- GTGAATGGAGCCCTTTATACAATTTTAGCTTGTGTGACTGGTTTCCCATGCTGCTACTCA
rJMSF052O12+ GTGAATGGAGCCCTTTATACAATTTTAGCTTGTGTGACTGGTTTCCCATGCTGCTACTCA
rJMFF001B07+ GTGAATGGAGCCCTTTATACAATTTTAGCTTGTGTGACTGGTTTCCCATGCTGCTACTCA
JMFN042M10+ GTGAATGGAGCCCTTTATACAATTTTAGCTTGTGTGACTGGTTTCCCATGCTGCTACTCA
____________________________________________________________
consensus GTGAATGGAGCCCTTTATACAATTTTAGCTTGTGTGACTGGTTTCCCATGCTGCTACTCA
. : . : . : . : . : . :
JMFF001B07- TGCTTCTACCGGTCAAAGATGAGGGAGCAGTACATGTTGAAGGAAACTCCCTGTGGGGAC
JMSF052O12- TGCTTCTACCGGTCAAAGATGAGGGAGCAGTACATGTTGAAGGAAACTCCCTGTGGGGAC
rJMSF052O12+ TGCTTCTACCGGTCAAAGATGAGGGAGCAGTACATGTTGAAGGAAACTCCCTGTGGGGAC
rJMFF001B07+ TGCTTCTACCGGTCAAAGATGAGGGAGCAGTACATGTTGAAGGAAACTCCCTGTGGGGAC
JMFN042M10+ TGCTTCTACCGGTCAAAGATGAGGGAGCAGTACATGTTGAAGGAAACTCCCTGTGGGGAC
____________________________________________________________
consensus TGCTTCTACCGGTCAAAGATGAGGGAGCAGTACATGTTGAAGGAAACTCCCTGTGGGGAC
. : . : . : . : . : . :
JMFF001B07- TGTTTGGTGCATTGCTTCTGCGAGTCCTGTGCCCTCTGCCAAGAATACCGCGAGCTTA
JMSF052O12- TGTTTGGTGCATTGCTTCTGCGAGTCCTGTGCCCTCTGCCAAGAATACCGCGAGCTTAAA
rJMSF052O12+ TGTTTGGTGCATTGCTTCTGCGAGTCCTGTGCCCTCTGCCAAGAATACCGCGAGCTTAAA
rJMFF001B07+ TGTTTGGTGCATTGCTTCTGCGAGTCCTGTGCCCTCTGCCAAGAATACCGCGAGCTTAAA
JMFN042M10+ TGTTTGGTGCATTGCTTCTGCGAGTCCTGTGCCCTCTGCCAAGAATACCGCGAGCTTAAA
____________________________________________________________
consensus TGTTTGGTGCATTGCTTCTGCGAGTCCTGTGCCCTCTGCCAAGAATACCGCGAGCTTAAA
. : . : . : . : . : . :
JMSF052O12- AACCGTGGCTTTGACATGTCTATTGGATGGCATGGAAACGTGGAAAGGCAAAATCGTGGA
rJMSF052O12+ AACCGTGGCTTTGACATGTCTATTGGATGGCATGGAAACGTGGAAAGGCAAAATCGTGGA
rJMFF001B07+ AACCGTGGCTTTGACATGTCTATTGGATGGCATGGAAACGTGGAAAGGCAAAATCGTGGA
JMFN042M10+ AACCGTGGCTTTGACATGTCTATTGGATGGCATGGAAACGTGGAAAGGCAAAATCGTGGA
____________________________________________________________
consensus AACCGTGGCTTTGACATGTCTATTGGATGGCATGGAAACGTGGAAAGGCAAAATCGTGGA
. : . : . : . : . : . :
JMSF052O12- GTTGCCATGGCGCCATTAGTTGAAGAAGG
rJMSF052O12+ GTTGCCATGGCGCCATTAGTTGAAGAAGGGATGAGCAGATAAGAAGGCTAGTTGGGCTGC
rJMFF001B07+ GTTGCCATGGCGCCATTAGTTGAAGAAGGGATGAGCAGATAAGAAGGCTAGTTGGGCTGC
JMFN042M10+ GTTGCCATGGCGCCATTAGTTGAAGAAGGGATGAGCAGATAAGAAGGCTAGTTGGGCTGC
____________________________________________________________
consensus GTTGCCATGGCGCCATTAGTTGAAGAAGGGATGAGCAGATAAGAAGGCTAGTTGGGCTGC
. : . : . : . : . : . :
rJMSF052O12+ CTTTTCAACTTTTGAAAATACTAAAATGCTCTTTTAAATTGGGTGTATCTTTTAAACATT
rJMFF001B07+ CTTTTCAACTTTTGAAAATACTAAAATGCTCTTTTAAATTGGGTGTATCTTTTAAACATT
JMFN042M10+ CTTTTCAACTTTTGAAAATACTAAAATGCTCTTTTAAATTGGGTGTATCTTTTAAACATT
____________________________________________________________
consensus CTTTTCAACTTTTGAAAATACTAAAATGCTCTTTTAAATTGGGTGTATCTTTTAAACATT
. : . : . : . : . : . :
rJMSF052O12+ TTTACTTTTTGGAATGTATTTATTAATTTTACTT
rJMFF001B07+ TTTACTTTTTGGAATGTATTTATTAATTTTACTTTGTGTAAATCTTCGGATATAAATAAT
JMFN042M10+ TTTACTTTTTGGAATGTATTTATTAATTTTACTTTGTGTAAATCTTCGGATATAAATAAT
____________________________________________________________
consensus TTTACTTTTTGGAATGTATTTATTAATTTTACTTTGTGTAAATCTTCGGATATAAATAAT
. : . : . : . : . : . :
rJMFF001B07+ TTTAATATTTACTAAAATTCGCATGC
JMFN042M10+ TTTAATATTTACTAAAATTCGCATGCXXXXXXXXXXXXXXXXXXCTCGAGACTAGTTCTC
____________________________________________________________
consensus TTTAATATTTACTAAAATTCGCATGCNNNNNNNNNNNNNNNNNNCTCGAGACTAGTTCTC