Contig 013061:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN015A19+                                                              TAGAGATAA
                      ____________________________________________________________
consensus                                                                TAGAGATAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN015A19+           TAATTATAATTACTGCACTAATTATTAACATTATTTAATTTAATTATTATTATTGGCGAG
JMFN042F17+                                        ATTATTTAATTTAATTATTATTATGGGCGAG
                      ____________________________________________________________
consensus             TAATTATAATTACTGCACTAATTATTAACATTATTTAATTTAATTATTATTATTGGCGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN015A19+           TTCTTTGTAGCACGGGTCCGATGGTCTTGAGTTCGAATCTTTTCACGGCTCCGGCGACGT
JMFN042F17+           TTCTTTGTAGCACGGGTCCGATGGTCTT-AGTTCGAATC-TTTCACGGCTCCGGCGACGT
                      ____________________________________________________________
consensus             TTCTTTGTAGCACGGGTCCGATGGTCTTGAGTTCGAATCTTTTCACGGCTCCGGCGACGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN015A19+           CACGCATCGTGGGGTCCACAACGTAGGAGATTCCGTCAACGGCGAGACGCGTGTCGTTGA
JMFN042F17+           CACGCATCGTGGGGTCCACAACGTAGGAGATTCCGTCAACGGCGAGACGCGTGTCGTTGA
                      ____________________________________________________________
consensus             CACGCATCGTGGGGTCCACAACGTAGGAGATTCCGTCAACGGCGAGACGCGTGTCGTTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN015A19+           CGAGCTGGCGGCACGGCTCCCGGCGCTGGGCGATGGTGCCGTGGTAATGGTAATACATGA
JMFN042F17+           CGAGCTGGCGGCACGGCTCCCGGCGCTGGGCGATGGTGCCGTGGTAATGGTAATACATGA
                      ____________________________________________________________
consensus             CGAGCTGGCGGCACGGCTCCCGGCGCTGGGCGATGGTGCCGTGGTAATGGTAATACATGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN015A19+           TGCGCCCCTCCGTCTTGTGGGTGGTGTTCCCGGCGGCGTTCTCCGACATGTGGACCCCGG
JMFN042F17+           TGCGCCCCTCCGTCTTGTGGGTGGTGTTCCCGGCGGCGTTCTCCGACATGTGGACCCCGG
                      ____________________________________________________________
consensus             TGCGCCCCTCCGTCTTGTGGGTGGTGTTCCCGGCGGCGTTCTCCGACATGTGGACCCCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN015A19+           TGGCGGCCACATTCCTCGGCTGCACCGCGTACTTCCGGTCCCGCCGGATCCCGGTCTTGG
JMFN042F17+           TGGCGGCCACATTCCTCGGCTGCACCGCGTACTTCCGGTCCCGCCGGATCCCGGTCTTGG
                      ____________________________________________________________
consensus             TGGCGGCCACATTCCTCGGCTGCACCGCGTACTTCCGGTCCCGCCGGATCCCGGTCTTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN015A19+           AGTCCTTGAACACCAGCTTCTCGAACCCCCATTTCCGGTGAGTTTTCCCGGCGTCTTCCC
JMFN042F17+           AGTCCTTGAACACCAGCTTCTCGAACCCCCATTTCCGGTGAGTTTTCCCGGCGTCTTCCC
                      ____________________________________________________________
consensus             AGTCCTTGAACACCAGCTTCTCGAACCCCCATTTCCGGTGAGTTTTCCCGGCGTCTTCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN015A19+           TGAGGCAGAGCTTATTGGACATCGGCATTTGCTCGATCGTGAACTGGGTGAAAGGGAAGA
JMFN042F17+           TGAGGCAGAGCTTATTGGACATCGGCATTTGCTCGATCGTGAACTGGGTGAAAGGGGAGA
                      ____________________________________________________________
consensus             TGAGGCAGAGCTTATTGGACATCGGCATTTGCTCGATCGTGAACTGGGTGAAAGGGGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN015A19+           GGGAATCCACGACGGATTTGAGCGTGTTTTTCTTGGGGATGAAGATGAACTCGTCGACGT
JMFN042F17+           GGGAATCCACGACGGATTTGAGCGTGTTTTTCTTGGGGATGAAGATGAACTCGTCGACGT
                      ____________________________________________________________
consensus             GGGAATCCACGACGGATTTGAGCGTGTTTTTCTTGGGGATGAAGATGAACTCGTCGACGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN015A19+           CGAAGAAGAACATCCATTTCGCCTGGAATTTGTATCTGTGAAGACAATCGTTTACGATTA
JMFN042F17+           CGAAGAAGAACATCCATTTCGCCTGGAATTTGTATCTGTGAAGACAATCGTTTACGATTA
                      ____________________________________________________________
consensus             CGAAGAAGAACATCCATTTCGCCTGGAATTTGTATCTGTGAAGACAATCGTTTACGATTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN015A19+           GGAATTGGT                                                   
JMFN042F17+           GGAATTGGTTATGGTAATACCCGTCGAATCGCTCTTCTTCCTTGACGTCTTGTAATGTGA
                      ____________________________________________________________
consensus             GGAATTGGTTATGGTAATACCCGTCGAATCGCTCTTCTTCCTTGACGTCTTGTAATGTGA