Contig 013060:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009B18Sequence585013060 (3)ref|XP_009368910.1|8e-72PREDICTED: thioredoxin-like 3-2, chloroplastic [Pyrus x bretschneideri]592013060 (3)ref|XP_009368910.1|9e-72PREDICTED: thioredoxin-like 3-2, chloroplastic [Pyrus x bretschneideri]
JMFN041H20Sequence629013060 (3)ref|XP_006361675.1|2e-65PREDICTED: thioredoxin-like 3-2, chloroplastic-like [Solanum tuberosum]

Alignment

This contig is upended


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rJMFF009B18-          AATTTTCCTGCTCAACAAAATATAAGGAGTACGAGGTAGAAAAGGGGTGGCTAAATTGTT
JMFF009B18+                  CTGCTCAACAAAATATAAGGAGTACGAGGTAGAAAAGGGGTGGCTAAATTGTT
                      ____________________________________________________________
consensus             AATTTTCCTGCTCAACAAAATATAAGGAGTACGAGGTAGAAAAGGGGTGGCTAAATTGTT
 
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rJMFF009B18-          TATAAAATGTATGTGTAAAGAATGTCACAAAGCAGATTCATTATTCTCAATCATTTCCCT
JMFF009B18+           TATAAAATGTATGTGTAAAGAATGTCACAAAGCAGATTCATTATTCTCAATCATTTCCCT
                      ____________________________________________________________
consensus             TATAAAATGTATGTGTAAAGAATGTCACAAAGCAGATTCATTATTCTCAATCATTTCCCT
 
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rJMFF009B18-          AACCTCATTAACAACCAAATGTGCTTTGTTTCCCCCAATCACCTCACCTTGTTTCTTGCC
JMFF009B18+           AACCTCATTAACAACCAAATGTGCTTTGTTTCCCCCAATCACCTCACCTTGTTTCTTGCC
                      ____________________________________________________________
consensus             AACCTCATTAACAACCAAATGTGCTTTGTTTCCCCCAATCACCTCACCTTGTTTCTTGCC
 
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rJMFF009B18-          ATCCTTCCACACCTGTATTGTCGGCATTTTAGTGACTCCCGCGCATACAACAAGCTTGTG
JMFF009B18+           ATCCTTCCACACCTGTATTGTCGGCATTTTAGTGACTCCCGCGCATACAACAAGCTTGTG
JMFN041H20+                                       TTAGTGACTCCCGCGCATACAACAAGCTTGTG
                      ____________________________________________________________
consensus             ATCCTTCCACACCTGTATTGTCGGCATTTTAGTGACTCCCGCGCATACAACAAGCTTGTG
 
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rJMFF009B18-          TGGAACACTATTCACGTCAACACTATAGAACCGTATACTGGGGTAATAACCGGCAGCCAA
JMFF009B18+           TGGAACACTATTCACGTCAACACTATAGAACCGTATACTGGGGTAATAACCGGCAGCCAA
JMFN041H20+           TGGAACACTATTCACGTCAACACTATAGAACCGTATACTGGGGTAATAACCGGCAGCCAA
                      ____________________________________________________________
consensus             TGGAACACTATTCACGTCAACACTATAGAACCGTATACTGGGGTAATAACCGGCAGCCAA
 
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rJMFF009B18-          CTTCTCCAATTTCGGTTTCAAATATATACATTTTCTGCACCAGCTTGCCTTCCATAGAAT
JMFF009B18+           CTTCTCCAATTTCGGTTTCAAATATATACATTTTCTGCACCAGCTTGCCTTCCATAGAAT
JMFN041H20+           CTTCTCCAATTTCGGTTTCAAATATATACATTTTCTGCACCAGCTTGCCTTCCATAGAAT
                      ____________________________________________________________
consensus             CTTCTCCAATTTCGGTTTCAAATATATACATTTTCTGCACCAGCTTGCCTTCCATAGAAT
 
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rJMFF009B18-          GACCAGTGATTCACCGAGTTGTTGGGCCTCGGCGACGACCCGGTCGAACTGAGATTCACT
JMFF009B18+           GACCAGTGATTCACCGAGTTGTTGGGCCTCGGCGACGACCCGGTCGAACTGAGATTCACT
JMFN041H20+           GACCAGTGATTCACCGAGTTGTTGGGCCTCGGCGACGACCCGGTCGAACTGAGATTCACT
                      ____________________________________________________________
consensus             GACCAGTGATTCACCGAGTTGTTGGGCCTCGGCGACGACCCGGTCGAACTGAGATTCACT
 
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rJMFF009B18-          GGAAATAGGTTGCAACTCTATCGACGCCGGCGAGTCATCGAGTCCCTGAACTGACCCTTC
JMFF009B18+           GGAAATAGGTTGCAACTCTATCGACGCCGGCGAGTCATCGAGTCCCTGAACTGACCCTTC
JMFN041H20+           GGAAATAGGTTGCAACTCTATCGACGCCGGCGAGTCATCGAGTCCCTGAACTGACCCTTC
                      ____________________________________________________________
consensus             GGAAATAGGTTGCAACTCTATCGACGCCGGCGAGTCATCGAGTCCCTGAACTGACCCTTC
 
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rJMFF009B18-          TTCGCCATACTTGGCTAAAGCTTCGATTTTTCCTACTCCAAAATGGGTTTTTATTGGACA
JMFF009B18+           TTCGCCATACTTGGCTAAAGCTTCGATTTTTCCTACTCCAAAATGGGTTTTTATTGGACA
JMFN041H20+           TTCGCCATACTTGGCTAAAGCTTCGATTTTTCCTACTCCAAAATGGGTTTTTATTGGACA
                      ____________________________________________________________
consensus             TTCGCCATACTTGGCTAAAGCTTCGATTTTTCCTACTCCAAAATGGGTTTTTATTGGACA
 
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rJMFF009B18-          AACAGCTACAAGATTCGGGGGGCAAGCAATCGCTCTAATCAAATTGAAATT         
JMFF009B18+           AACAGCTACAAGATTCGGGGGGCAAGCAATCGCTCTAATCAAATTGAAATT         
JMFN041H20+           AACAGCTACAAGATTCGGGGGGCAAGCAATCGCTCTAATCAAATTGAAATTGGGAAAACA
                      ____________________________________________________________
consensus             AACAGCTACAAGATTCGGGGGGCAAGCAATCGCTCTAATCAAATTGAAATTGGGAAAACA
 
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JMFN041H20+           AAATGGGGGTTTTGTGTTTAAATATGTAATTTTGCTGGCCGGAGATATTTGTAGAACGTT
                      ____________________________________________________________
consensus             AAATGGGGGTTTTGTGTTTAAATATGTAATTTTGCTGGCCGGAGATATTTGTAGAACGTT
 
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JMFN041H20+           AGACATGTCTGCCTGCGTTTTCTTTACATGTGTCTGTGTTACTGTGCACTGCCCTTGCCT
                      ____________________________________________________________
consensus             AGACATGTCTGCCTGCGTTTTCTTTACATGTGTCTGTGTTACTGTGCACTGCCCTTGCCT