Contig 013053:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN015N09Sequence572013053 (3)ref|XP_004245305.1|8e-55PREDICTED: uncharacterized protein At4g14342 [Solanum lycopersicum] ref|XP_00635
JMFN020G02Sequence573013053 (3)ref|XP_004245305.1|9e-55PREDICTED: uncharacterized protein At4g14342 [Solanum lycopersicum] ref|XP_00635
JMFN037E18Sequence595013053 (3)ref|XP_004245305.1|1e-54PREDICTED: uncharacterized protein At4g14342 [Solanum lycopersicum] ref|XP_00635

Alignment

This contig is upended


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JMFN020G02+               TCAGATTAAATTAACATCAAACAGCATCAATGCTGATCGCATAGTTTACCAAGTGG
JMFN015N09+                CAGATTAAATTAACATCAAACAGCATCAATGCTGATCGCATAGTTTACCAAGTGG
JMFN037E18+                CAGATTAAATTAACATCAAACAGCATCAATGCTGATCGCATAGTTTACCAAGTGG
                      ____________________________________________________________
consensus                 TCAGATTAAATTAACATCAAACAGCATCAATGCTGATCGCATAGTTTACCAAGTGG
 
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JMFN020G02+           ACACCCTCAGAAAGTGACTACTGGTATCCCCATCATCCAAAAAAGGAAAATAAGTAATCC
JMFN015N09+           ACACCCTCAGAAAGTGACTACTGGTATCCCCATCATCCAAAAAAGGAAAATAAGTAATCC
JMFN037E18+           ACACCCTCAGAAAGTGACTACTGGTATCCCCATCATCCAAAAAAGGAAAATAAGTAATCC
                      ____________________________________________________________
consensus             ACACCCTCAGAAAGTGACTACTGGTATCCCCATCATCCAAAAAAGGAAAATAAGTAATCC
 
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JMFN020G02+           ATTGGGTGGGTTACAACTTACAAAGCTAACAGAAGTAGAAATGCACTAGAGATTATAATA
JMFN015N09+           ATTGGGTGGGTTACAACTTACAAAGCTAACAGAAGTAGAAATGCACTAGAGATTATAATA
JMFN037E18+           ATTGGGTGGGTTACAACTTACAAAGCTAACAGAAGTAGAAATGCACTAGAGATTATAATA
                      ____________________________________________________________
consensus             ATTGGGTGGGTTACAACTTACAAAGCTAACAGAAGTAGAAATGCACTAGAGATTATAATA
 
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JMFN020G02+           CAGATCCTGTTATTACAATATAGCAGGAGCAGAGAGGACTTGGTTTGAAGATGACCAGAA
JMFN015N09+           CAGATCCTGTTATTACAATATAGCAGGAGCAGAGAGGACTTGGTTTGAAGATGACCAGAA
JMFN037E18+           CAGATCCTGTTATTACAATATAGCAGGAGCAGAGAGGACTTGGTTTGAAGATGACCAGAA
                      ____________________________________________________________
consensus             CAGATCCTGTTATTACAATATAGCAGGAGCAGAGAGGACTTGGTTTGAAGATGACCAGAA
 
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JMFN020G02+           TATTTAGCTGCATAGCATGTTAAAACTCTTAATCATCTTCCCTCTCTGGTGGAAGACCAC
JMFN015N09+           TATTTAGCTGCATAGCATGTTAAAACTCTTAATCATCTTCCCTCTCTGGTGGAAGACCAC
JMFN037E18+           TATTTAGCTGCATAGCATGTTAAAACTCTTAATCATCTTCCCTCTCTGGTGGAAGACCAC
                      ____________________________________________________________
consensus             TATTTAGCTGCATAGCATGTTAAAACTCTTAATCATCTTCCCTCTCTGGTGGAAGACCAC
 
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JMFN020G02+           AAGGTGCAAGCATTTTCTGCATGAAATTGTAGCGCTCTCTTCCAATAGATTCATTCTCCG
JMFN015N09+           AAGGTGCAAGCATTTTCTGCATGAAATTGTAGCGCTCTCTTCCAATAGATTCATTCTCCG
JMFN037E18+           AAGGTGCAAGCATTTTCTGCATGAAATTGTAGCGCTCTCTTCCAATAGATTCATTCTCCG
                      ____________________________________________________________
consensus             AAGGTGCAAGCATTTTCTGCATGAAATTGTAGCGCTCTCTTCCAATAGATTCATTCTCCG
 
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JMFN020G02+           CAATAGCAAAGTAGGCCAACATTGGGTAGTGGCCAATATAGGAAGCATAGCAATCGCGCT
JMFN015N09+           CAATAGCAAAGTAGGCCAACATTGGGTAGTGGCCAATATAGGAAGCATAGCAATCGCGCT
JMFN037E18+           CAATAGCAAAGTAGGCCAACATTGGGTAGTGGCCAATATAGGAAGCATAGCAATCGCGCT
                      ____________________________________________________________
consensus             CAATAGCAAAGTAGGCCAACATTGGGTAGTGGCCAATATAGGAAGCATAGCAATCGCGCT
 
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JMFN020G02+           GAATATTAACTGCCCACTCAAATCTAGTCAAGTCAGCATGTCCAGTTCCTACATATCTAG
JMFN015N09+           GAATATTAACTGCCCACTCAAATCTAGTCAAGTCAGCATGTCCAGTTCCTACATATCTAG
JMFN037E18+           GAATATTAACTGCCCACTCAAATCTAGTCAAGTCAGCATGTCCAGTTCCTACATATCTAG
                      ____________________________________________________________
consensus             GAATATTAACTGCCCACTCAAATCTAGTCAAGTCAGCATGTCCAGTTCCTACATATCTAG
 
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JMFN020G02+           CTTGCAAGTGTTCTAGCTGGGAGTTGATATTGAATCTATCACTTGCCTGCATTTTTTCCT
JMFN015N09+           CTTGCAAGTGTTCTAGCTGGGAGTTGATATTGAATCTATCACTTGCCTGCATTTTTTCCT
JMFN037E18+           CTTGCAAGTGTTCTAGCTGGGAGTTGATATTGAATCTATCACTTGCCTGCATTTTTTCCT
                      ____________________________________________________________
consensus             CTTGCAAGTGTTCTAGCTGGGAGTTGATATTGAATCTATCACTTGCCTGCATTTTTTCCT
 
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JMFN020G02+           TTCTTCCTCACTGAGTAGAAACGAGAAAGCAGCAGAA                       
JMFN015N09+           TTCTTCCTCACTGAGTAGAAACGAGAAAGCAGCAGAA                       
JMFN037E18+           TTCTTCCTCACTGAGTAGAAACGAGAAAGCAGCAGAAGATGTCAAGAGGAGAGAATTCTG
                      ____________________________________________________________
consensus             TTCTTCCTCACTGAGTAGAAACGAGAAAGCAGCAGAAGATGTCAAGAGGAGAGAATTCTG