Contig 013052:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN005D04Sequence622013052 (5)gb|AAG10403.1|AF233284_12e-22mannose-binding lectin [Convolvulus arvensis]
JMFN018G10Sequence586013052 (5)gb|AAG10403.1|AF233284_15e-53mannose-binding lectin [Convolvulus arvensis]
JMFN019D01Sequence530013052 (5)gb|AAG10403.1|AF233284_13e-55mannose-binding lectin [Convolvulus arvensis]
JMFN031H03Sequence631013052 (5)gb|AAG10403.1|AF233284_18e-55mannose-binding lectin [Convolvulus arvensis]
JMFN036L18Sequence467013052 (5)gb|AAC49564.1|7e-17lectin [Calystegia sepium]

Alignment

This contig is upended


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JMFN005D04-                                                               GAGAGAGA
                      ____________________________________________________________
consensus                                                                 GAGAGAGA
 
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JMFN005D04-           GAGAACTAGTCTCGAGXXXXXXXXXXXXXXXXXXXXXXXAGAATAAAAGGACAGGATATT
                      ____________________________________________________________
consensus             GAGAACTAGTCTCGAGNNNNNNNNNNNNNNNNNNNNNNNAGAATAAAAGGACAGGATATT
 
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JMFN005D04-           ATTATTATACACCTAATAGGGGCAACATTATTTATTAATATGCTCACACACATGAGAGCA
                      ____________________________________________________________
consensus             ATTATTATACACCTAATAGGGGCAACATTATTTATTAATATGCTCACACACATGAGAGCA
 
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JMFN005D04-           TATTATTTGAGAAACATAAAACATGCACCGCTCAGTACAACGTTATCAAGCCATTTGGAA
                      ____________________________________________________________
consensus             TATTATTTGAGAAACATAAAACATGCACCGCTCAGTACAACGTTATCAAGCCATTTGGAA
 
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JMFN005D04-           CTTATTCAACATGACATCCAAAACATAAAAGGTGTTCCAATTGAGCATTAAGCTTCAGAG
                      ____________________________________________________________
consensus             CTTATTCAACATGACATCCAAAACATAAAAGGTGTTCCAATTGAGCATTAAGCTTCAGAG
 
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JMFN005D04-           TAACGATATAATCACTTAATAATCAGGTGCATTATAAGTACCAATAGCATCAATATAATA
JMFN018G10+                                       GCATTATAAGTACCAATAGCATCAATATAATA
JMFN019D01+                     ATCACTTAATAATCAGGTGCATTATAAGTACCAATAGCATCAATATAATA
JMFN031H03+                                       GCATTATAAGTACCAATAGCATCAATATAATA
                      ____________________________________________________________
consensus             TAACGATATAATCACTTAATAATCAGGTGCATTATAAGTACCAATAGCATCAATATAATA
 
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JMFN005D04-           TCCAGATCGCCCAAAGAACCCAACAATCTTATTACCATTCTGAGCCTGGAAGTTGAAAGG
JMFN018G10+           TCCAGATCGCCCAAAGAACCCAACAATCTTATTACCATTCTGAGCCTGGAAGTTGAAAGG
JMFN019D01+           TCCAGATCGCCCAAAGAACCCAACAATCTTATTACCATTCTGAGCCTGGAAGTTGAAAGG
JMFN031H03+           TCCAGATCGCCCAAAGAACCCAACAATCTTATTACCATTCTGAGCCTGGAAGTTGAAAGG
                      ____________________________________________________________
consensus             TCCAGATCGCCCAAAGAACCCAACAATCTTATTACCATTCTGAGCCTGGAAGTTGAAAGG
 
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JMFN005D04-           TGTTACAACATTGGGGCCATACGTCCCAAACTCTCTTGCGTTGGTAGTAAACTTTATAGA
JMFN018G10+           TGTTCCAACATTGGGGCCATACGTCCCAAACTCTCTTGCGTTGGTAGTAAACTTTATAGA
JMFN019D01+           TGTTCCAACATTGGGGCCATACGTCCCAAACTCTCTTGCGTTGGTAGTAAACTTTATAGA
JMFN031H03+           TGTTCCAACATTGGGGCCATACGTCCCAAACTCTCTTGCGTTGGTAGTAAACTTTATAGA
                      ____________________________________________________________
consensus             TGTTCCAACATTGGGGCCATACGTCCCAAACTCTCTTGCGTTGGTAGTAAACTTTATAGA
 
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JMFN005D04-           TCGTAACACATTGTCGCTACTTGCGAAAGCTCCAAACGTTCCACTTATCTCAGTCAGGTA
JMFN018G10+           TCGTAACACATTGTCGCTACTTGCGAAAGCTCCAAACGTTCCACTTATCTCAGTCAGGTA
JMFN019D01+           TCGTAACACATTGTCGCTACTTGCGAAAGCTCCAAACGTTCCACTTATCTCAGTCAGGTA
JMFN031H03+           TCGTAACACATTGTCGCTACTTGCGAAAGCTCCAAACGTTCCACTTATCTCAGTCAGGTA
                      ____________________________________________________________
consensus             TCGTAACACATTGTCGCTACTTGCGAAAGCTCCAAACGTTCCACTTATCTCAGTCAGGTA
 
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JMFN005D04-           TTCATCCTCGCCATCAATATTAATC                                   
JMFN018G10+           TTCATCCTCGCCATCAATATTAATCGTGTCGTTATGCGTGACGTTGGTTTCTGTCCCACC
JMFN019D01+           TTCATCCTCGCCATCAATATTAATCGTGTCGTTATGCGTGACGTTGGTTTCTGTCCCACC
JMFN031H03+           TTCATCCTCGCCATCAATATTAATCGTGTCGTTATGCGTGACGTTGGTTTCTGTCCCACC
JMFN036L18+                                   CGTGTCGTTATGCGTGACGTTGGTTTCTGTCCCACC
                      ____________________________________________________________
consensus             TTCATCCTCGCCATCAATATTAATCGTGTCGTTATGCGTGACGTTGGTTTCTGTCCCACC
 
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JMFN018G10+           TCCACCAATTGTGAGTGTATCCTTTGAGCCATCATTCTTTGTGGCAGAAACCCCCATACC
JMFN019D01+           TCCACCAATTGTGAGTGTATCCTTTGAGCCATCATTCTTTGTGGCAGAAAAAGTTATACC
JMFN031H03+           TCCACCAATTGTGAGTGTATCCTTTGAGCCATCATTCTTTGTGGCAGAAAAAGTTATACG
JMFN036L18+           TCCACCAATTGTGAGTGTATCCTTTGAGCCATCATTCTTTGTGGCAGAAAAAGTTATACC
                      ____________________________________________________________
consensus             TCCACCAATTGTGAGTGTATCCTTTGAGCCATCATTCTTTGTGGCAGAAAAAGTTATACC
 
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JMFN018G10+           AATGGGATTGTTATTTCCGCGCCCACCAAATGAAATAACAATTTGATTGATCTTATTCTT
JMFN019D01+           AATGGGATTGTTATTTCCGCGCCCACCAAATGAAATAACAATTTGATTGATCTTATTCTT
JMFN031H03+           AATGGGATTGTTATTTCCGCGCCCACCAAATGAAATAACAATTTGATTGATCTTATTCTT
JMFN036L18+           AATGGGATTGTTATTTCCGCGCCCACCAAATGAAATAACAATTTGATTGATCTTATTTTT
                      ____________________________________________________________
consensus             AATGGGATTGTTATTTCCGCGCCCACCAAATGAAATAACAATTTGATTGATCTTATTCTT
 
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JMFN018G10+           AGGTCGGAAACTCCAAAACCCACCACCATTGTGTCCCAATGGACCATATGCGACATCGGT
JMFN019D01+           AGGTCGGAAACTCCAAAACCCACCACCATTGTGTCCCAATGGACCATATGCGACATCGGT
JMFN031H03+           AGGTCGGAAACTCCAAAACCCACCACCATTGTGTCCCAATGGACCATATGCGACATCGGT
JMFN036L18+           AGGTGGGAAACTCGCCACCCCACCACCATTGTGTCCCAATGGACCATATGCGACATCGGT
                      ____________________________________________________________
consensus             AGGTCGGAAACTCCAAAACCCACCACCATTGTGTCCCAATGGACCATATGCGACATCGGT
 
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JMFN018G10+           GGAAATTGACATTGTT                                            
JMFN019D01+           GGAAATTGACATTGTT                                            
JMFN031H03+           GGAAATTGACATTGTTGAATGATAATTGAA                              
JMFN036L18+           GGAAATTGACATTGTTGAATGATAATTGAAAAGCAAAAGGTAGGGAGCTGAGAATGAAAA
                      ____________________________________________________________
consensus             GGAAATTGACATTGTTGAATGATAATTGAAAAGCAAAAGGTAGGGAGCTGAGAATGAAAA