| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN036C12 | Sequence | 641 | 013050 (3) | ref|XP_003527264.1| | 1e-09 | PREDICTED: peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic-like [Glyci | |||||
| JMSF032H14 | Sequence | 681 | 005178 (3) | ref|XP_009629213.1| | 2e-67 | PREDICTED: peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic-like isofor | 770 | 013050 (3) | ref|XP_009795941.1| | 8e-123 | PREDICTED: peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic isoform X2 |
| JMSF041G24 | Sequence | 727 | 005178 (3) | ref|XP_009629213.1| | 2e-86 | PREDICTED: peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic-like isofor | 671 | 013050 (3) | ref|XP_010313888.1| | 2e-103 | PREDICTED: peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic isoform X3 |
This contig is upended
. : . : . : . : . : . :
rJMSF032H14+ TTTTNGTTGCCTGAACAGTACC
____________________________________________________________
consensus TTTTNGTTGCCTGAACAGTACC
. : . : . : . : . : . :
rJMSF032H14+ TGAACTATCCAAGGCTCACAGGAAGAGGAATGGTCGAATTCACAGTTGAGAAGGGAGATG
____________________________________________________________
consensus TGAACTATCCAAGGCTCACAGGAAGAGGAATGGTCGAATTCACAGTTGAGAAGGGAGATG
. : . : . : . : . : . :
rJMSF041G24+ TTTCTCCAGAATCTGGTGGTGAAGGAAAGAGCATCACAAAAATTCAGGTTG
rJMSF032H14+ GTTCATTGTTTTCTCCAGAATCTGGTGGTGAAGGAAAGAGCATCACAAAAATTCAGGTTG
____________________________________________________________
consensus GTTCATTGTTTTCTCCAGAATCTGGTGGTGAAGGAAAGAGCATCACAAAAATTCAGGTTG
. : . : . : . : . : . :
rJMSF041G24+ TTTTAGACGGGTATTCAGCACCACTGACAGCAGGAAACTTTGCAAAACTGGTGATTGATG
rJMSF032H14+ TTTTAGACGGGTATTCAGCACCACTGACAGCAGGAAACTTTGCAAAACTGGTGATTGATG
____________________________________________________________
consensus TTTTAGACGGGTATTCAGCACCACTGACAGCAGGAAACTTTGCAAAACTGGTGATTGATG
. : . : . : . : . : . :
rJMSF041G24+ GTGCGTATGATGGTGTGAAGCTCAACTGTGCCAATCAAGCAATTCTTACAGAAAGCAGGT
rJMSF032H14+ GTGCGTATGATGGTGTGAAGCTCAACTGTGCCAATCAAGCAATTCTTACAGAAAGCAGGT
____________________________________________________________
consensus GTGCGTATGATGGTGTGAAGCTCAACTGTGCCAATCAAGCAATTCTTACAGAAAGCAGGT
. : . : . : . : . : . :
rJMSF041G24+ TGGGGAAGGACATTGGATATAGCGTTCCCTTAGAGATCATGCCGTCTGGGCAGTTTGAGC
rJMSF032H14+ TGGGGAAGGACATTGGATATAGCGTTCCCTTAGAGATCATGCCGTCTGGGCAGTTTGAGC
____________________________________________________________
consensus TGGGGAAGGACATTGGATATAGCGTTCCCTTAGAGATCATGCCGTCTGGGCAGTTTGAGC
. : . : . : . : . : . :
rJMSF041G24+ CACTATACAAAACAACTTTGAGTGTGCAGGATGGGGAGCTTCCTGTGCTTCCGTTATCAG
rJMSF032H14+ CACTATACAAAACAACTTTGAGTGTGCAGGATGGGGAGCTTCCTGTGCTTCCGTTATCAG
____________________________________________________________
consensus CACTATACAAAACAACTTTGAGTGTGCAGGATGGGGAGCTTCCTGTGCTTCCGTTATCAG
. : . : . : . : . : . :
rJMSF041G24+ TTTATGGTGCAGTTGCCATGGCACACAGTGATGTTTCCGAGGAGTACTCATCACCAAGCC
rJMSF032H14+ TTTATGGTGCAGTTGCCATGGCACACAGTGATGTTTCCGAGGAGTACTCATCACCAAGCC
____________________________________________________________
consensus TTTATGGTGCAGTTGCCATGGCACACAGTGATGTTTCCGAGGAGTACTCATCACCAAGCC
. : . : . : . : . : . :
rJMSF041G24+ AGTTTTTCTTTTATCTTTATGACAAGAGAAATTCTGGCCTAGGAGGCATATCTTTTGAAG
rJMSF032H14+ AGTTTTTCTTTTATCTTTATGACAAGAGAAATTCTGGCCTAGGAGGCATATCTTTTGAAG
____________________________________________________________
consensus AGTTTTTCTTTTATCTTTATGACAAGAGAAATTCTGGCCTAGGAGGCATATCTTTTGAAG
. : . : . : . : . : . :
rJMSF041G24+ AAGGTCAATTTTCTGTCTTCGGATATACCACTGCTGGAAGAGAAATTCTTTCTCAGATTA
rJMSF032H14+ AAGGTCAATTTTCTGTCTTCGGATATACCACTGCTGGAAGAGAAATTCTTTCTCAGATTA
JMFN036C12- GATATACCACTACTGGAAGAGAAATTCTTTCTCAGATTA
____________________________________________________________
consensus AAGGTCAATTTTCTGTCTTCGGATATACCACTGCTGGAAGAGAAATTCTTTCTCAGATTA
. : . : . : . : . : . :
rJMSF041G24+ AAACTGGAGATGTGATTCGATCTGCAAAGCTCGTGGAAGGCCAAGATCGCCTCGTTCTAC
rJMSF032H14+ AAACTGGAGATGTGATTCGATCTGCAAAGCTCGTGGAAGGCCAAGATCGCCTCGTTCTAC
JMFN036C12- AAACTGGAGATGTGATTTGATCTGCAAAGCTCGTGGAAGGCCAAGATCGCCTCGTTTTAC
____________________________________________________________
consensus AAACTGGAGATGTGATTCGATCTGCAAAGCTCGTGGAAGGCCAAGATCGCCTCGTTCTAC
. : . : . : . : . : . :
rJMSF041G24+ CAAAAGAGAGTTTGTAAAATCT
rJMSF032H14+ CAAAAGAGAGTTTGTAAAATCT
JMFN036C12- CAAAAGAGAGTTTATAAAATCTGCATATTTAGCCTCTCCCCTTCCTCTGGATAGTAGCCA
____________________________________________________________
consensus CAAAAGAGAGTTTGTAAAATCTGCATATTTAGCCTCTCCCCTTCCTCTGGATAGTAGCCA
. : . : . : . : . : . :
JMFN036C12- ACTTTGTCATGTTTTGATGATCTATATATTTCAAACTTACCAGCTGAACATCATCCTCCC
____________________________________________________________
consensus ACTTTGTCATGTTTTGATGATCTATATATTTCAAACTTACCAGCTGAACATCATCCTCCC
. : . : . : . : . : . :
JMFN036C12- TCGCCGTCCTGTTCTAACACTCTCCGGCGGAAGCGACCTTGGACTCAATTATGTCGGAGA
____________________________________________________________
consensus TCGCCGTCCTGTTCTAACACTCTCCGGCGGAAGCGACCTTGGACTCAATTATGTCGGAGA
. : . : . : . : . : . :
JMFN036C12- AGCGGTGGTTGGGGATTTCCGGCGGACTGGACTTGTTTGCAACACGGGAAAGAATGGCAG
____________________________________________________________
consensus AGCGGTGGTTGGGGATTTCCGGCGGACTGGACTTGTTTGCAACACGGGAAAGAATGGCAG
. : . : . : . : . : . :
JMFN036C12- CAAACCGATCAACATCTTGGGATAACAGATCAAAATTTTCATCACCACTGCAATTGGATG
____________________________________________________________
consensus CAAACCGATCAACATCTTGGGATAACAGATCAAAATTTTCATCACCACTGCAATTGGATG
. : . : . : . : . : . :
JMFN036C12- GTTAGCGAATCCATCCCTCAACTTCGCTAACCTCTTAGGCCAGCTCAGTGAATGCTCCTC
____________________________________________________________
consensus GTTAGCGAATCCATCCCTCAACTTCGCTAACCTCTTAGGCCAGCTCAGTGAATGCTCCTC
. : . : . : . : . : . :
JMFN036C12- CACCAAGTGAAGAGCGGCAATTTATATCCTACACCACAGCGCGCGTTGCATTATGCGCCC
____________________________________________________________
consensus CACCAAGTGAAGAGCGGCAATTTATATCCTACACCACAGCGCGCGTTGCATTATGCGCCC
. : . : . : . : . : . :
JMFN036C12- AGATGCAAAACGACGTCGTTTTAATTATTTTTTTTTTTGAAATTTCCCGCCCCAGTGAAT
____________________________________________________________
consensus AGATGCAAAACGACGTCGTTTTAATTATTTTTTTTTTTGAAATTTCCCGCCCCAGTGAAT
. : . : . : . : . : . :
JMFN036C12- GGCAGTAGTTTTTTCTTTAAAAAAAAACCCGCTGGTTCAGAATGTACATAATGTTATACT
____________________________________________________________
consensus GGCAGTAGTTTTTTCTTTAAAAAAAAACCCGCTGGTTCAGAATGTACATAATGTTATACT