Contig 013047:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF048E06-                           GTGTTTGTTACAAGAAAGAAATTTCCTCTCAATGAAAGTTGGC
                      ____________________________________________________________
consensus                              GTGTTTGTTACAAGAAAGAAATTTCCTCTCAATGAAAGTTGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF048E06-          TGCCTAGGCCTAGCTTGAATTTGAGGCTTTTCCTAAAATAAGCCAATAATAGATTACCAT
                      ____________________________________________________________
consensus             TGCCTAGGCCTAGCTTGAATTTGAGGCTTTTCCTAAAATAAGCCAATAATAGATTACCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF048E06-          TCTCTTTAGATACTTCAATTCCCTCTTTTTTGGAGTAAACAACACTATTTTTATGACATT
                      ____________________________________________________________
consensus             TCTCTTTAGATACTTCAATTCCCTCTTTTTTGGAGTAAACAACACTATTTTTATGACATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF048E06-          AATAATTAATTAGTAATTTAATTGATCCTTTTCCCACTTCTGCTTTGATGCAACTCGTTC
                      ____________________________________________________________
consensus             AATAATTAATTAGTAATTTAATTGATCCTTTTCCCACTTCTGCTTTGATGCAACTCGTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF048E06-          ATGGCAGGGATTGTATTCCTCCAATTCATTCATTAGCTCTTTTGCATTAGGGGCTGAGAC
JMSF048E06+                                                              GGCTGAGAC
                      ____________________________________________________________
consensus             ATGGCAGGGATTGTATTCCTCCAATTCATTCATTAGCTCTTTTGCATTAGGGGCTGAGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF048E06-          GAAAATTTGGCGCGCATTTGGGCTGATGAATCCTTCTTCTACAGCTTTGTCAATAAATGT
JMSF048E06+           GAAAATTTGGCGCGCATTTGGGCTGATGAATCCTTCTTCTACAGCTTTGTCAATAAATGT
                      ____________________________________________________________
consensus             GAAAATTTGGCGCGCATTTGGGCTGATGAATCCTTCTTCTACAGCTTTGTCAATAAATGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF048E06-          GAGCAGAGAATTATAGTAACCTTCTACATTCAGTAACCCCACCGGTTTATCATGGATGCC
JMSF048E06+           GAGCAGAGAATTATAGTAACCTTCTACATTCAGTAACCCCACCGGTTTATCATGGATGCC
JMFN034H16+                                                     CGGTTTATCATGGATGCC
                      ____________________________________________________________
consensus             GAGCAGAGAATTATAGTAACCTTCTACATTCAGTAACCCCACCGGTTTATCATGGATGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF048E06-          AAGTTGAGCCCAAGCTATGACTTCAAGAAGCTCTTCTAGAGTTCCATACCCACCAGGTAA
JMSF048E06+           AAGTTGAGCCCAAGCTATGACTTCAAGAAGCTCTTCTAGAGTTCCATACCCACCAGGTAA
JMFN034H16+           AAGTTGAGCCCAAGCTATGACTTCAAGAAGCTCTTCTAGAGTTCCATACCCACCAGGTAA
                      ____________________________________________________________
consensus             AAGTTGAGCCCAAGCTATGACTTCAAGAAGCTCTTCTAGAGTTCCATACCCACCAGGTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF048E06-          AGCAATAAAGGCATCAGAATGCTTAGCCATCTCAGCTTTCCTCTGGTGCATATCAGCTAC
JMSF048E06+           AGCAATAAAGGCATCAGAATGCTTAGCCATCTCAGCTTTCCTCTGGTGCATATCAGCTAC
JMFN034H16+           AGCAATAAAGGCATCAGAATGCTTAGCCATCTCAGCTTTCCTCTGGTGCATATCAGCTAC
                      ____________________________________________________________
consensus             AGCAATAAAGGCATCAGAATGCTTAGCCATCTCAGCTTTCCTCTGGTGCATATCAGCTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF048E06-          AGCCTTTACTTCTCCCACTGTTTCCCCAGTTATCTCTCTTGGCAGAAGAGTCTTGGGAAT
JMSF048E06+           AGCCTTTACTTCTCCCACTGTTTCCCCAGTTATCTCTCTTGGCAGAAGAGTCTTGGGAAT
JMFN034H16+           AGCCTTTACTTCTCCCACTGTTTCCCCAGTTATCTCTCTTGGCAGAAGAGTCTTGGGAAT
                      ____________________________________________________________
consensus             AGCCTTTACTTCTCCCACTGTTTCCCCAGTTATCTCTCTTGGCAGAAGAGTCTTGGGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF048E06-          AACTCCAAGGACATGACGGCCACCATTGTAAACAGCTTGAGAGACCAGTCCCATCAACCC
JMSF048E06+           AACTCCAAGGACATGACGGCCACCATTGTAAACAGCTTGAGAGACCAGTCCCATCAACCC
JMFN034H16+           AACTCCAAGGACATGACGGCCACCATTGTAAACAGCTTGAGAGACCAGTCCCATCAACCC
                      ____________________________________________________________
consensus             AACTCCAAGGACATGACGGCCACCATTGTAAACAGCTTGAGAGACCAGTCCCATCAACCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF048E06-          AATGCTTCCTCCTCCATACACTAAGTCTATATTCCTTGATACCAATTCTTTGCCAAGTTC
JMSF048E06+           AATGCTTCCTCCTCCATACACTAAGTCTATATTCCTTGATACCAATTCTTTGCCAAGTTC
JMFN034H16+           AATGCTTCCTCCTCCATACACTAAGTCTATATTCCTTGATACCAATTCTTTGCCAAGTTC
                      ____________________________________________________________
consensus             AATGCTTCCTCCTCCATACACTAAGTCTATATTCCTTGATACCAATTCTTTGCCAAGTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF048E06-          AATGGCTGCTTCTTTATAGGAATTCTTCTTGCCAGGGCTACTGCCACAGAACACACAAAT
JMSF048E06+           AATGGCTGCTTCTTTATAGGAATTCTTCTTGCCAGGGCTACTGCCACAGAACACACAAAT
JMFN034H16+           AATGGCTGCTTCTTTATAGGAATTCTTCTTGCCAGGGCTACTGCCACAGAACACACAAAT
                      ____________________________________________________________
consensus             AATGGCTGCTTCTTTATAGGAATTCTTCTTGCCAGGGCTACTGCCACAGAACACACAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF048E06-          TCTTTTGAATT                                                 
JMSF048E06+           TCTTTTGAATTTGGACTGTTGTAATGCTTCTTTCTCCTTTCCCACCTCCATACTTCTTCT
JMFN034H16+           TCTTTTGAATTTGGACTGTTGTAATGCTTCTTTCTCCTTTCCCACCTCCATACTTCTTCT
                      ____________________________________________________________
consensus             TCTTTTGAATTTGGACTGTTGTAATGCTTCTTTCTCCTTTCCCACCTCCATACTTCTTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF048E06+           TCTCTCTCTCTCTTCCTACTTTTATTTTCTCTGAATAATGTGTGGGAGATAGGCTTTTTG
JMFN034H16+           TCTCTCTCTCTCTTCCTACTTTTATTTTCTCTGAATAATGTGTGGGAGATAGGCTTTTTG
                      ____________________________________________________________
consensus             TCTCTCTCTCTCTTCCTACTTTTATTTTCTCTGAATAATGTGTGGGAGATAGGCTTTTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF048E06+           GTGAGAGTTTGTGTTGTGCTAAATCTTGTAGACTTATAGTGCCTTT              
JMFN034H16+           GTGAGAGTTTGTGTTGTGCTAAATCTTGTAGACTTATAGTGCCTTTTGTACTAAGCTCTC
                      ____________________________________________________________
consensus             GTGAGAGTTTGTGTTGTGCTAAATCTTGTAGACTTATAGTGCCTTTTGTACTAAGCTCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN034H16+           TCTCTCTCTCTATCTGCTGTTGTCTTCCCCACAGTTGGGGGCAGGAGGCCACTTCACAAA
                      ____________________________________________________________
consensus             TCTCTCTCTCTATCTGCTGTTGTCTTCCCCACAGTTGGGGGCAGGAGGCCACTTCACAAA