Contig 013041:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN030F09Sequence605013041 (2)ref|XP_002265147.1|134PREDICTED: uncharacterized protein LOC100252669 [Vitis vinifera]
JMSF025O02Sequence631014675ref|XP_009762981.1|4e-27PREDICTED: mediator of RNA polymerase II transcription subunit 11-like isoform 712013041 (2)ref|XP_002265147.1|122PREDICTED: uncharacterized protein LOC100252669 [Vitis vinifera]

Alignment

This contig is upended


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rJMSF025O02-                  GATGAATCATGAAAGGACTAAAATGGTGATGATTAAAAACAGGGTATATTTT
                      ____________________________________________________________
consensus                     GATGAATCATGAAAGGACTAAAATGGTGATGATTAAAAACAGGGTATATTTT
 
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rJMSF025O02-          ACACTGGGTGAAAGGGTATTTTACAGACACCCTAAAAAAGGGAATAAGAAGAAGAAGAAG
                      ____________________________________________________________
consensus             ACACTGGGTGAAAGGGTATTTTACAGACACCCTAAAAAAGGGAATAAGAAGAAGAAGAAG
 
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rJMSF025O02-          AAGAAGAAGAAGGAGATCACCATGGCACTAAGAGAGAAATCTTCAGGCCCAAACACCCCA
JMFN030F09+                                                                  CCCCA
                      ____________________________________________________________
consensus             AAGAAGAAGAAGGAGATCACCATGGCACTAAGAGAGAAATCTTCAGGCCCAAACACCCCA
 
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rJMSF025O02-          GATTCTTTCTCCAAGAAAGCTCACAAATCTCCTAACAGCACCTCTCTCCTCACCATAACC
JMFN030F09+           GATTCTTTCTCCAAGAAAGCTCACAAATCTCCTAACAGCACCTCTCTCCTCACCATAACC
                      ____________________________________________________________
consensus             GATTCTTTCTCCAAGAAAGCTCACAAATCTCCTAACAGCACCTCTCTCCTCACCATAACC
 
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rJMSF025O02-          ATCTTCTTCTTCTTCGCCGCCATGGGTGGTGGTGCTGACAGGGCTCTCCTCCGCTGCCGG
JMFN030F09+           ATCTTCTTCTTCTTCGCCGCCATGGGTGGTGGTGCTGACAGGGCTCTCCTCCGCTGCCGG
                      ____________________________________________________________
consensus             ATCTTCTTCTTCTTCGCCGCCATGGGTGGTGGTGCTGACAGGGCTCTCCTCCGCTGCCGG
 
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rJMSF025O02-          GACTGACTCACCGGATTCATCCTCATTTAGACCCACCTCAAGCTTCTTCTTCAACTCACT
JMFN030F09+           GACTGACTCACCGGATTCATCCTCATTTAGACCCACCTCAAGCTTCTTCTTCAACTCACT
                      ____________________________________________________________
consensus             GACTGACTCACCGGATTCATCCTCATTTAGACCCACCTCAAGCTTCTTCTTCAACTCACT
 
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rJMSF025O02-          CCCAGACCCACTGCCACAATCTTTATTACCCTTCCTTCTTTCTCTCCTGCTCTTCTCTTT
JMFN030F09+           CCCAGACCCACTGCCACAATCTTTATTACCCTTCCTTCTTTCTCTCCTGCTCTTCTCTTT
                      ____________________________________________________________
consensus             CCCAGACCCACTGCCACAATCTTTATTACCCTTCCTTCTTTCTCTCCTGCTCTTCTCTTT
 
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rJMSF025O02-          CTTGCTCTGCAGCCCATCTTCATAAGCATCTATGACTTGGTGTATGAGCTGGCGGTTAGG
JMFN030F09+           CTTGCTCTGCAGCCCATCTTCATAAGCATCTATGACTTGGTGTATGAGCTGGCGGTTAGG
                      ____________________________________________________________
consensus             CTTGCTCTGCAGCCCATCTTCATAAGCATCTATGACTTGGTGTATGAGCTGGCGGTTAGG
 
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rJMSF025O02-          GGAGGAATCCCACCTCACCCAGAAACTCATGTAGCAGTTGAAGCAGTAGCAGTTGGAGGA
JMFN030F09+           GGAGGAATCCCACCTCACCCAGAAACTCATGTAGCAGTTGAAGCAGTAGCAGTTGGAGGA
                      ____________________________________________________________
consensus             GGAGGAATCCCACCTCACCCAGAAACTCATGTAGCAGTTGAAGCAGTAGCAGTTGGAGGA
 
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JMFN030F09+           AGGTGGGTGGCCGGAGAAGGAGGAGGTGGTGGTTGTCCTGGTGGCAGAGAAGTTCCCAGA
                      ____________________________________________________________
consensus             AGGTGGGTGGCCGGAGAAGGAGGAGGTGGTGGTTGTCCTGGTGGCAGAGAAGTTCCCAGA
 
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JMFN030F09+           AGGGCAAGAGATAAGATAAGCCAAGGCTTCCTGGTCTTCTGGGGATAGAGCAGCAGTGAT
                      ____________________________________________________________
consensus             AGGGCAAGAGATAAGATAAGCCAAGGCTTCCTGGTCTTCTGGGGATAGAGCAGCAGTGAT
 
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JMFN030F09+           GGCTAAGATTGCTGCTGGCAAGAAAGCTAGCTTGTCTGAAACCAATGGTGGAGATGGATG
                      ____________________________________________________________
consensus             GGCTAAGATTGCTGCTGGCAAGAAAGCTAGCTTGTCTGAAACCAATGGTGGAGATGGATG
 
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JMFN030F09+           AACTGTGTTCTTCCTGTATAGCTTCTTCATGGCTGATGATGATGATGATGATGAGAGAGA
                      ____________________________________________________________
consensus             AACTGTGTTCTTCCTGTATAGCTTCTTCATGGCTGATGATGATGATGATGATGAGAGAGA