| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF017D18 | Sequence | 531 | 010557 (3) | ref|XP_009782265.1| | 9e-21 | PREDICTED: chaperone protein dnaJ 15 [Nicotiana sylvestris] | 194 | 013040 (4) | ref|XP_009760945.1| | 3e-05 | PREDICTED: chaperone protein dnaJ 15-like [Nicotiana sylvestris] |
| JMFF018J24 | Sequence | 537 | 010557 (3) | ref|XP_009782265.1| | 2e-22 | PREDICTED: chaperone protein dnaJ 15 [Nicotiana sylvestris] | 508 | 013040 (4) | gb|EYU32452.1| | 3e-39 | hypothetical protein MIMGU_mgv1a014193mg [Erythranthe guttata] |
| JMFN030A17 | Sequence | 595 | 013040 (4) | ref|XP_009760945.1| | 4e-42 | PREDICTED: chaperone protein dnaJ 15-like [Nicotiana sylvestris] | |||||
| JMSF003G19 | Sequence | 347 | 010557 (3) | 712 | 013040 (4) | ref|XP_009760945.1| | 4e-74 | PREDICTED: chaperone protein dnaJ 15-like [Nicotiana sylvestris] | |||
This contig is upended
. : . : . : . : . : . :
rJMFF018J24+ TNNGTTAGCAATGGNTNAGGATCCAGAAGNTNCTT
____________________________________________________________
consensus TNNGTTAGCAATGGNTNAGGATCCAGAAGNTNCTT
. : . : . : . : . : . :
rJMFF018J24+ TTTTCAAAAGGNTGGAAGGCCTTCANCCTTGTGANATCTCAGAGTTNAAGNNTGGCANTC
rJMSF003G19+ TGGCACTC
____________________________________________________________
consensus TTTTCAAAAGGNTGGAAGGCCTTCANCCTTGTGANATCTCAGAGTTNAAGNNTGGCACTC
. : . : . : . : . : . :
rJMFF018J24+ ATANTTTTGNTGTTTATGGAGATAANTTNNTTAANCCTGCAACGTACNCAANTGAGNNTC
rJMSF003G19+ ATATTTTTGCTGTTTATGGAGATAACTTCTTTAAACCTGCAACGTACACAATTGAGGCTC
____________________________________________________________
consensus ATATTTTTGCTGTTTATGGAGATAACTTCTTTAAACCTGCAACGTACACAATTGAGGCTC
. : . : . : . : . : . :
rJMFF018J24+ TNNGTTTCAAGACATNTGAGGATACNACAAGTAAGCTGANGGATANTGAGGNTCAGATTC
rJMSF003G19+ TTTGTTCCAAGACATATGAGGATACAACAAGTAAGCTGAAGGATATTGAGGCTCAGATTC
____________________________________________________________
consensus TTTGTTTCAAGACATATGAGGATACAACAAGTAAGCTGAAGGATATTGAGGCTCAGATTC
. : . : . : . : . : . :
rJMFF018J24+ TAAGCANGNGAAATGAGNTTAGNCAGTTTGACACAGAGTATNGAAAGGNTNTGGCGCGTT
rJMSF003G19+ TAAGCAAGAGAAATGAGCTTCGACAGTTTGAGACAGAGTATAGAAAGGCTTTGGCGCGTT
JMFN030A17- GAAATGAGCTTCGACAGTTTGAGACAGAGTATAGAAAGGCTTTGGCGCGTT
____________________________________________________________
consensus TAAGCAAGAGAAATGAGCTTCGACAGTTTGAGACAGAGTATAGAAAGGCTTTGGCGCGTT
. : . : . : . : . : . :
rJMFF018J24+ TCCAGGAAGTCACCAACAGATNCANCCAGGNGAAGCAGTCAGNNGAGNAACTTANGAAAC
rJMFF017D18+ GAAAC
rJMSF003G19+ TCCAGGAAGTCACCAACAGATACAGCCAGGAGAAGCAGTCAGTTGAGGAACTTCTGAAAC
JMFN030A17- TCCAGGAAGTCACCAACAGATACAGCCAGGAGAAGCAGTCAGTTGAGGAACTTCTGAAAC
____________________________________________________________
consensus TCCAGGAAGTCACCAACAGATACAGCCAGGAGAAGCAGTCAGTTGAGGAACTTCTGAAAC
. : . : . : . : . : . :
rJMFF018J24+ NACGAGACACCATCCATTCTGCCTTNACCNTCNCAAGGGCAGTTGTTCCCGTTGGTGGTA
rJMFF017D18+ NACGAGACACCATCCATTCTGCCTTNACCATCNCAAGGGCAGTTGTTCCCGTTGGTGGTA
rJMSF003G19+ AACGAGACACCATCCATTCTGCCTTCACCATCACAAGGGCAGTTGTTACCGTTGGTGGTA
JMFN030A17- AACGAGACACCATCCATTCTGCCTTCACCATCACAAGGGCAGTTGTTACCGTTGGTGGTA
____________________________________________________________
consensus AACGAGACACCATCCATTCTGCCTTCACCATCACAAGGGCAGTTGTTACCGTTGGTGGTA
. : . : . : . : . : . :
rJMFF018J24+ ATGGGAGTGGGCTTTTCAGTAATGNAAGTAGCAGTAGATCTCNTGGTGNCGACTTTAAGG
rJMFF017D18+ ATGGGAGTGGGCTTTTCAGTAATGNAAGTAGCAGTAGATCTCNTGGTGNCGACTTTAAGG
rJMSF003G19+ ATGGGAGTGGGCTTTTCAGTAATGAAAGTAGCAGTAGATCTCCTGGTGACGACTTTAAGG
JMFN030A17- ATGGGAGTGGGCTTTTCAGTAATGAAAGTAGCAGTAGATCTCCTGGTGACGACTTTAAGG
____________________________________________________________
consensus ATGGGAGTGGGCTTTTCAGTAATGAAAGTAGCAGTAGATCTCCTGGTGACGACTTTAAGG
. : . : . : . : . : . :
rJMFF018J24+ CGGAAAGTCCAGAAGATNGAAGNTCAGAATCCAAGAAGANAAAATGGTTCAAT
rJMFF017D18+ CGGAAAGTCCAGAAGATGGAAGTTCAGAATCCAAGAAGAAAAAATGGTTCAATNNTAACC
rJMSF003G19+ CGGAAAGTCCAGAAGATGGAAGTTCAGAATCCAAGAAGAAAAAATGGTTCAATCTTAACC
JMFN030A17- CGGAAAGTCCAGAAGATGGAAGTTCAGAATCCAAGAAGAAAAAATGGTTCAATCTTAACC
____________________________________________________________
consensus CGGAAAGTCCAGAAGATGGAAGTTCAGAATCCAAGAAGAAAAAATGGTTCAATCTTAACC
. : . : . : . : . : . :
rJMFF017D18+ TCAAAG
rJMSF003G19+ TCAAAGGATATGATAAAAAACTTGGTTAAAAGGATTATTAAAAAAAGAAAAAGAAAAAAA
JMFN030A17- TCAAAGGA--TGATAAAAAACTTGGTTAAAAGGATTATTAAAAAAAGAAAAAGAAAAAAA
____________________________________________________________
consensus TCAAAGGATATGATAAAAAACTTGGTTAAAAGGATTATTAAAAAAAGAAAAAGAAAAAAA
. : . : . : . : . : . :
rJMSF003G19+ AGAGCTTGAAATTCAATTCTTTTAAAACCAGGTGGCTTGCTGCCCATTTGCTGCCTCTGG
JMFN030A17- AGAGCTTGAAATTCAATTCTTTTAAAACCAGGTGGCTTGCTGCCCATTTGCTGCCTCTGG
____________________________________________________________
consensus AGAGCTTGAAATTCAATTCTTTTAAAACCAGGTGGCTTGCTGCCCATTTGCTGCCTCTGG
. : . : . : . : . : . :
rJMSF003G19+ GAGTTACCATCATGTAATTTTGTCCAATTTGTTTTAGTATTATATTTCTTTTCCTAGAAT
JMFN030A17- GAGTTACCATCATGTAATTTTGTCCAATTTGTTTTAGTATTATATTTCTTTTCCTAGAAT
____________________________________________________________
consensus GAGTTACCATCATGTAATTTTGTCCAATTTGTTTTAGTATTATATTTCTTTTCCTAGAAT
. : . : . : . : . : . :
rJMSF003G19+ TTTGTGATAGCCATTCACCCGCAAAAATGTTCAAAAATATAAATATTACAATGTAAATGT
JMFN030A17- TTTGTGATAGCCATTCACCCGCAAAAATGTTCAAAAATATAAATATTACAATGTANATGT
____________________________________________________________
consensus TTTGTGATAGCCATTCACCCGCAAAAATGTTCAAAAATATAAATATTACAATGTAAATGT
. : . : . : . : . : . :
rJMSF003G19+ GTCAATTCATGCATTGTACTGTTACAGTGCATAAGCT
JMFN030A17- GTCAATTCATGCATTGTACTGTTACAGTGCATAAGCTGATACGAGCATGCAAGTTCCTAT
____________________________________________________________
consensus GTCAATTCATGCATTGTACTGTTACAGTGCATAAGCTGATACGAGCATGCAAGTTCCTAT