Contig 013037:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007L15Sequence525013037 (11)ref|XP_011073284.1|3e-74PREDICTED: succinate dehydrogenase assembly factor 2, mitochondrial [Sesamum in715013037 (11)ref|XP_011073284.1|3e-83PREDICTED: succinate dehydrogenase assembly factor 2, mitochondrial [Sesamum in
JMFF013A23Sequence504013037 (11)ref|XP_011073284.1|3e-69PREDICTED: succinate dehydrogenase assembly factor 2, mitochondrial [Sesamum in717013037 (11)ref|XP_011073284.1|3e-78PREDICTED: succinate dehydrogenase assembly factor 2, mitochondrial [Sesamum in
JMFF015H16Sequence556013037 (11)ref|XP_011073284.1|8e-58PREDICTED: succinate dehydrogenase assembly factor 2, mitochondrial [Sesamum in719013037 (11)ref|XP_011073284.1|4e-55PREDICTED: succinate dehydrogenase assembly factor 2, mitochondrial [Sesamum in
JMFF050M11Sequence634013037 (11)ref|XP_011073284.1|8e-84PREDICTED: succinate dehydrogenase assembly factor 2, mitochondrial [Sesamum in588013037 (11)ref|XP_011073284.1|1e-40PREDICTED: succinate dehydrogenase assembly factor 2, mitochondrial [Sesamum in
JMFN020P11Sequence650013037 (11)ref|XP_011073284.1|1e-83PREDICTED: succinate dehydrogenase assembly factor 2, mitochondrial [Sesamum in
JMSF048C03Sequence671013037 (11)ref|XP_011073284.1|2e-83PREDICTED: succinate dehydrogenase assembly factor 2, mitochondrial [Sesamum in715013037 (11)ref|XP_011073284.1|3e-83PREDICTED: succinate dehydrogenase assembly factor 2, mitochondrial [Sesamum in

Alignment

This contig is upended


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rJMFF050M11-                                                             ACCCTGGAG
                      ____________________________________________________________
consensus                                                                ACCCTGGAG
 
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rJMFF050M11-          AGTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTAACAAGGACAAATCTTACAATTACCA
rJMFF013A23-                                                               ATTACCA
rJMFF015H16-                                                               ATTACCA
                      ____________________________________________________________
consensus             AGTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTAACAAGGACAAATCTTACAATTACCA
 
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rJMFF050M11-          TATAACTTACAAAAAGTACCTTTTAACTAGAATCACAGAATTGAAATTATGCAGACAGAA
rJMFF013A23-          TATAACTTACAAAAAG-ACCTTTTAACTAGAATCACAGAATTGAAATTATGCAGACAGAA
rJMFF015H16-          TATAACTTACAAAAAGTACCTTTTAACTAGAATCACAGAATTGAAATTATGCAGACAGAA
                      ____________________________________________________________
consensus             TATAACTTACAAAAAGTACCTTTTAACTAGAATCACAGAATTGAAATTATGCAGACAGAA
 
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rJMFF050M11-          CAGAAGATTCATATGTACTACTATTGAATCTGGTGTCATATGCTCAGAGCCATAAGATTT
rJMFF013A23-          CAGAAGATTCATATGTACTACTATTGAATCTGGTGTCATATGCTCAGAGCCATAAGATTT
rJMFF015H16-          CAGAAGATTCATATGTACTACTATTGAATCTGGTGTCATATGCTCAGAGCCATAAGATTT
rJMFF007L15-                                     ATCTGGTGTCATATGCTCAGAGCCATAAGATTT
rJMSF048C03-                                     ATCTGGTGTCATATGCTCAGAGCCATAAGATTT
                      ____________________________________________________________
consensus             CAGAAGATTCATATGTACTACTATTGAATCTGGTGTCATATGCTCAGAGCCATAAGATTT
 
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rJMFF050M11-          CATAGTTTCACACCCAATGGATTATGGCTAAGGTTTTATTTGTACTTTGAGCTAAATCTA
rJMFF013A23-          CATAGTTTCACACCCAATGGATTATGGCTAAGGTTTTATTTGTACTTTGAGCTAAATCTA
rJMFF015H16-          CATAGTTTCACACCCAATGGATTATGGCTAAGGTTTTATTTGTACTTTGAGCTAAATCTA
rJMFF007L15-          CATAGTTTCACACCCAATGGATTATGGCTAAGGTTTTATTTGTACTTTGAGCTAAATCTA
rJMSF048C03-          CATAGTTTCACACCCAATGGATTATGGCTAAGGTTTTATTTGTACTTTGAGCTAAATCTA
JMSF048C03+                                               TATTTGTACTTTGAGCTAAATCTA
                      ____________________________________________________________
consensus             CATAGTTTCACACCCAATGGATTATGGCTAAGGTTTTATTTGTACTTTGAGCTAAATCTA
 
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rJMFF050M11-          CACAACATTTTAATACAGCCATTCACTTCATGATTATTTCTCTATATTTTATACGAGTTT
rJMFF013A23-          CACAACATTTTAATACAGCCATTCACTTCATGATTATTTCTCTATATTTTATACGAGTTT
rJMFF015H16-          CACAACATTTTAATACAGCCATTCACTTCATGATTATTTCTCTATATTTTATACGAGTTT
rJMFF007L15-          CACAACATTTTAATACAGCCATTCACTTCATGATTATTTCTCTATATTTTATACGAGTTT
rJMSF048C03-          CACAACATTTTAATACAGCCATTCACTTCATGATTATTTCTCTATATTTTATACGAGTTT
JMFF050M11+                        TACAGCCATTCACTTCATGATTATTTCTCTATATNTTATACGAGTTT
JMSF048C03+           CACAACATTTTAATACAGCCATTCACTTCATGATTATTTCTCTATATTTTATACGAGTTT
JMFN020P11+                                                                     TT
                      ____________________________________________________________
consensus             CACAACATTTTAATACAGCCATTCACTTCATGATTATTTCTCTATATTTTATACGAGTTT
 
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rJMFF050M11-          GTTCAACACTTGTCTTAAACAAGGCTACTGGTTCCCGGCTATAGGGCTGTCTCGCCCTCT
rJMFF013A23-          GTTCAACACTTGTCTTAAACAAGGCTACTGGTTCCCGGCTATAGGGCTGTCTCGCCCTCT
rJMFF015H16-          GTTCAACACTTGTCTTAAACAAGGCTACTGGTTCCCGGCTATAGGGCTGTCTCGCCCTCT
rJMFF007L15-          GTTCAACACTTGTCTTAAACAAGGCTACTGGTTCCCGGCTATAGGGCTGTCTCGCCCTCT
rJMSF048C03-          GTTCAACACTTGTCTTAAACAAGGCTACTGGTTCCCGGCTATAGGGCTGTCTCGCCCTCT
JMFF050M11+           GTTCAACACTNGTCTTAAACAAGGCTACTGGTTCCCGGCTATAGGGCTGTCTCGCCCTCT
JMFF015H16+                                       TGGTTCCCGGCTATAGGGCTGTCTCGCCNTCT
JMSF048C03+           GTTCAACACTTGTCTTAAACAAGGCTACTGGTTCCCGGCTATAGGGCTGTCTCGCCCTCT
JMFN020P11+           GTTCAACACTTGTCTTAAACAAGGCTACTGGTTCCCGGCTATAGGGCTGTCTCGCCCTCT
                      ____________________________________________________________
consensus             GTTCAACACTTGTCTTAAACAAGGCTACTGGTTCCCGGCTATAGGGCTGTCTCGCCCTCT
 
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rJMFF050M11-          CTTGAAATCGTCCCAACCTCTCACCCACGACTGCCCGGTAGTTGCTCGGGTCTCAGGAGC
rJMFF013A23-          CTTGAAATCGTCCCAACCTCTCACCCACGACTGCCCGGTAGTTGCTCGGGTCTCAGGAGC
rJMFF015H16-          CTTGAAATCGTCCCAACCTCTCACCCACGACTGCCCGGTAGTTGCTCGGGTCTCAGGAGC
rJMFF007L15-          CTTGAAATCGTCCCAACCTCTCACCCACGACTGCCCGGTAGTTGCTCGGGTCTCAGGAGC
rJMSF048C03-          CTTGAAATCGTCCCAACCTCTCACCCACGACTGCCCGGTAGTTGCTCGGGTCTCAGGAGC
JMFF007L15+           CTTGAAATCGTCCCAACNTCTCACCCACGACTGCCCGGTAGTTGCTCGGGTCTCAGGAGC
JMFF050M11+           CTTGAAATCGTCCCAACCTCTCACCCACGACTGCCCGGTAGTTGCTCGGGTCTCAGGAGC
JMFF015H16+           CTTGAAATCGTCCCAACCTCTCACCCACGACTGCCCGGTAGTTGCTCGGGTCTCAGGAGC
JMFF013A23+                                CACCCACGACTGCCCGGTAGTTGCTCGGGTCTCAGGAGC
JMSF048C03+           CTTGAAATCGTCCCAACCTCTCACCCACGACTGCCCGGTAGTTGCTCGGGTCTCAGGAGC
JMFN020P11+           CTTGAAATCGTCCCAACCTCTCACCCACGACTGCCCGGTAGTTGCTCGGGTCTCAGGAGC
                      ____________________________________________________________
consensus             CTTGAAATCGTCCCAACCTCTCACCCACGACTGCCCGGTAGTTGCTCGGGTCTCAGGAGC
 
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rJMFF050M11-          AGCGTGTTTGTCAAGGTTGTTCATGATCTTCGTGTGGACGGAAGTGAACACGGGATTGGT
rJMFF013A23-          AGCGTGTTTGTCAAGGTTGTTCATGATCTTCGTGTGGACGGAAGTGAACACGGGATTGGT
rJMFF015H16-          AGCGTGTTTGTCAAGGTTGTTCATGATCTTCGTGTGGACGGAAGTGAACACGGGATTGGT
rJMFF007L15-          AGCGTGTTTGTCAAGGTTGTTCATGATCTTCGTGTGGACGGAAGTGAACACGGGATTGGT
rJMSF048C03-          AGCGTGTTTGTCAAGGTTGTTCATGATCTTCGTGTGGACGGAAGTGAACACGGGATTGGT
JMFF007L15+           AGCGTGTTTGTCAAGGTTGTTCATGATCTTCGTGTGGACGGAAGTGAACACGGGATTGGT
JMFF050M11+           AGCGTGTTTGTCAAGGTTGTTCATGATCTTCGTGTGGACGGAAGTGAACACGGGATTGGT
JMFF015H16+           AGCGTGTTTGTCAAGGTTGTTCATGATCTTCGTGTGGACGGAAGTGAACACGGGATTGGT
JMFF013A23+           AGCGTGTTTGTCAAGGTTGTTCATGATCTTCGTGTGGACGGAAGTGAACACGGGATTGGT
JMSF048C03+           AGCGTGTTTGTCAAGGTTGTTCATGATCTTCGTGTGGACGGAAGTGAACACGGGATTGGT
JMFN020P11+           AGCGTGTTTGTCAAGGTTGTTCATGATCTTCGTGTGGACGGAAGTGAACACGGGATTGGT
                      ____________________________________________________________
consensus             AGCGTGTTTGTCAAGGTTGTTCATGATCTTCGTGTGGACGGAAGTGAACACGGGATTGGT
 
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rJMFF050M11-          TCTTATTCCATCTGGGGCTGGCTCCTGACCCGTCAACCACTTCCACAGATCAGGATTCTC
rJMFF013A23-          TCTTATTCCATCTGGGGCTGGCTCCTGACCCGTCAACCACTTCCACAGATCAGGATTCTC
rJMFF015H16-          TCTTATTCCATCTGGGGCTGGCTCCTGACCCGTCAACC-CTTCCACAGATCAGGATTCTC
rJMFF007L15-          TCTTATTCCATCTGGGGCTGGCTCCTGACCCGTCAACCACTTCCACAGATCAGGATTCTC
rJMSF048C03-          TCTTATTCCATCTGGGGCTGGCTCCTGACCCGTCAACCACTTCCACAGATCAGGATTCTC
JMFF007L15+           TCTTATTCCATCTGGGGCTGGCTCCTGACCCGTCAACCACTTCCACAGATCAGGATTCTC
JMFF050M11+           TCTTATTCCATCTGGGGCTGGCTCCTGACCCGTCAACCACTTCCACAGATCAGGATTCTC
JMFF015H16+           TCTTATTCCATCTGGGGCTGGCTCCTGACCCGTCAACC-CTTCCACAGATCAGGATTCTC
JMFF013A23+           TCTTATTCCATCTGGGGCTGGCTCCTGACCCGTCAACCACTTCCACAGATCAGGATTCTC
JMSF048C03+           TCTTATTCCATCTGGGGCTGGCTCCTGACCCGTCAACCACTTCCACAGATCAGGATTCTC
JMFN020P11+           TCTTATTCCATCTGGGGCTGGCTCCTGACCCGTCAACCACTTCCACAGATCAGGATTCTC
                      ____________________________________________________________
consensus             TCTTATTCCATCTGGGGCTGGCTCCTGACCCGTCAACCACTTCCACAGATCAGGATTCTC
 
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rJMFF050M11-          CACATCAAGAACATGAACAAGAGCCTTAATTCCAGTTTC                     
rJMFF013A23-          CACATCAAGAACATGAACAAGAGCCTTAATTCCAGTTTCATCCATGGAATGGATATGATC
rJMFF015H16-          CACATCAAGAACATGAACAAGAGCCTTAATTCCAGTTTCATCCATGGAATGGATATGATC
rJMFF007L15-          CACATCAAGAACATGAACAAGAGCCTTAATTCCAGTTTCATCCATGGAATGGATATGATC
rJMSF048C03-          CACATCAAGAACATGAACAAGAGCCTTAATTCCAGTTTCATCCATGGAATGGATATGATC
JMFF007L15+           CACATCAAGAACATGAACAAGAGCCTTAATTCCAGTTTCATCCATGGAATGGATATGATC
JMFF050M11+           CACATCAAGAACATGAACAAGAGCCTTAATTCCAGTTTCATCCATGGAATGGATATGATC
JMFF015H16+           CACATCAAGAACATGAACAAGAGCCTTAATTCCAGTTTCATCCATGGAATGGATATGATC
JMFF013A23+           CACATCAAGAACATGAACAAGAGCCTTAATTCCAGTTTCATCCATGGAATGGATATGATC
JMSF048C03+           CACATCAAGAACATGAACAAGAGCCTTAATTCCAGTTTCATCCATGGAATGGATATGATC
JMFN020P11+           CACATCAAGAACATGAACAAGAGCCTTAATTCCAGTTTCATCCATGGAATGGATATGATC
                      ____________________________________________________________
consensus             CACATCAAGAACATGAACAAGAGCCTTAATTCCAGTTTCATCCATGGAATGGATATGATC
 
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rJMFF013A23-          CTCCACCCATTTGCCCAGAATGAGGTCCAGCTCAAGGTACCCTCTTTGTTTGCTCCTATA
rJMFF015H16-          CTCCACCCATTTGCCCAGAATGAGGTCCAGCTCAAGGTACCCTCTTTGTTTGCTCCTATA
rJMFF007L15-          CTCCACCCATTTGCCCAGAATGAGGTCCAGCTCAAGGTACCCTCTTTGTTTGCTCCTATA
rJMSF048C03-          CTCCACCCATTTGCCCAGAATGAGGTCCAGCTCAAGGTACCCTCTTTGTTTGCTCCTATA
JMFF007L15+           CTCCACCCATTTGCCCAGAATGAGGTCCAGCTCAAGGTACCCTCTTTGTTTGCTCCTATA
JMFF050M11+           CTCCACCCATTTGCCCAGAATGAGGTCCAGCTCAAGGTACCCTCTTTGTTTGCTCCTATA
JMFF015H16+           CTCCACCCATTTGCCCAGAATGAGGTCCAGCTCAAGGTACCCTCTTTGTTTGCTCCTATA
JMFF013A23+           CTCCACCCATTTGCCCAGAATGAGGTCCAGCTCAAGGTACCCTCTTTGTTTGCTCCTATA
JMSF048C03+           CTCCACCCATTTGCCCAGAATGAGGTCCAGCTCAAGGTACCCTCTTTGTTTGCTCCTATA
JMFN020P11+           CTCCACCCATTTGCCCAGAATGAGGTCCAGCTCAAGGTACCCTCTTTGTTTGCTCCTATA
                      ____________________________________________________________
consensus             CTCCACCCATTTGCCCAGAATGAGGTCCAGCTCAAGGTACCCTCTTTGTTTGCTCCTATA
 
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rJMFF013A23-          TAAAAGCCTGTTGACTAACCGCCTTTTGGCTTCTTCATCGGAGAGATCGATACCTAGGTT
rJMFF015H16-          TAAAAGCCTGTTGACTAACCGCCTTTTGGCTTCTTCATCGGAGAGATCGATACCTAGGTT
rJMFF007L15-          TAAAAGCCTGTTGACTAACCGCCTTTTGGCTTCTTCATCGGAGAGATCGATACCTAGGTT
rJMSF048C03-          TAAAAGCCTGTTGACTAACCGCCTTTTGGCTTCTTCATCGGAGAGATCGATACCTAGGTT
JMFF007L15+           TAAAAGCCTGTTGACTAACCGCCTTTTGGCTTCTTCATCGGAGAGATCGATACCTAGGTT
JMFF050M11+           TAAAAGCCTGTTGACTAACCGCCTTTTGGCTTCTTCATCGGAGAGATCGATACCTAGGTT
JMFF015H16+           TAAAAGCCTGTTGACTAACCGCCTTTTGGCTTCTTCATCGGAGAGATCGATACCTAGGTT
JMFF013A23+           TAAAAGCCTGTTGACTAACCGCCTTTTGGCTTCTTCATCGGAGAGATCGATACCTAGGTT
JMSF048C03+           TAAAAGCCTGTTGACTAACCGCCTTTTGGCTTCTTCATCGGAGAGATCGATACCTAGGTT
JMFN020P11+           TAAAAGCCTGTTGACTAACCGCCTTTTGGCTTCTTCATCGGAGAGATCGATACCTAGGTT
                      ____________________________________________________________
consensus             TAAAAGCCTGTTGACTAACCGCCTTTTGGCTTCTTCATCGGAGAGATCGATACCTAGGTT
 
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rJMFF013A23-          AGAAGAGCACAAACGCGAGAAAGAACCCAAAAGCGGCCTGTTGG                
rJMFF015H16-          AGAAGAGCACAAACGCGAGAAAGAAACCAAAAGCGGCCTGTTGGAGG             
rJMFF007L15-          AGAAGAGCACAAACGCGAGAAAGAACCCAAAAGCGGCCTGTTGGAGGGGATCGGTGAAGT
rJMSF048C03-          AGAAGAGCACAAACGCGAGAAAGAACCCAAAAGCGGCCTGTTGGAGGGGATCGGTGAAGT
JMFF007L15+           AGAAGAGCACAAACGCGAGAAAGAACCCAAAAGCGGCCTGTTGGAGGGGATCGGTGAAGT
JMFF050M11+           AGAAGAGCACAAACGCGAGAAAGAACCCAAAAGCGGCCTGTTGGAGGGGATCGGTGAAGT
JMFF015H16+           AGAAGAGCACAAACGCGAGAAAGAAACCAAAAGCGGCCTGTTGGAGGGGATCGGTGAAGT
JMFF013A23+           AGAAGAGCACAAACGCGAGAAAGAACCCAAAAGCGGCCTGTTGGAGGGGATCGGTGAAGT
JMSF048C03+           AGAAGAGCACAAACGCGAGAAAGAACCCAAAAGCGGCCTGTTGGAGGGGATCGGTGAAGT
JMFN020P11+           AGAAGAGCACAAACGCGAGAAAGAACCCAAAAGCGGCCTGTTGGAGGGGATCGGTGAAGT
                      ____________________________________________________________
consensus             AGAAGAGCACAAACGCGAGAAAGAACCCAAAAGCGGCCTGTTGGAGGGGATCGGTGAAGT
 
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rJMFF007L15-          TTGATTTGTGGGATTAAGGAGAATTCGAGCGAAGGAGGATACAAGAGACCTTCTCGTGAT
rJMSF048C03-          TTGATTTGTGGGATTAAGGAGAATTCGAGCGAAGGAGGATACAAGAGACCTTCTCGTGAT
JMFF007L15+           TTGATTTGTGGGATTAAGGAGAATTCGAGCGAAGGAGGATACAAGAGACCTTCTCGTGAT
JMFF050M11+           TTGATTTGTGGGATTAAGGAGAATTCGAGCGAAGGAGGATACAAGAGACCTTCTCGTGAT
JMFF015H16+           TTGATTTGTGGGATTAAGGAGAATTCGAGCGAAGGAGGATACAAGAGACCTTCTCGTGAT
JMFF013A23+           TTGATTTGTGGGATTAAGGAGAATTCGAGCGAAGGAGGATACAAGAGACCTTCTCGTGAT
JMSF048C03+           TTGATTTGTGGGATTAAGGAGAATTCGAGCGAAGGAGGATACAAGAGACCTTCTCGTGAT
JMFN020P11+           TTGATTTGTGGGATTAAGGAGAATTCGAGCGAAGGAGGATACAAGAGACCTTCTCGTGAT
                      ____________________________________________________________
consensus             TTGATTTGTGGGATTAAGGAGAATTCGAGCGAAGGAGGATACAAGAGACCTTCTCGTGAT
 
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rJMFF007L15-          CGCCATTGTTTTTCTTTCTTCA                                      
rJMSF048C03-          CGCCATTGTTTTTCTTTCTTCA                                      
JMFF007L15+           CGCCATTGTTTTTCTTTCTTCAAGAAGACAGGCAAAGGAGT                   
JMFF050M11+           CGCCATTGTTTTTCTTTCTTCAAGAAGACAGGCAAAGGAGTT                  
JMFF015H16+           CGCCATTGTTTTTCTTTCTTCAAGAAGACAGGCAAAGGAGTTT                 
JMFF013A23+           CGCCATTGTTTTTCTTTCTTCAAGAAGACAGGCAAAGGAGTTT                 
JMSF048C03+           CGCCATTGTTTTTCTTTCTTCAAGAAGACAGGCAAAGGAGTTT                 
JMFN020P11+           CGCCATTGTTTTTCTTTCTTCAAGAAGACAGGCAAAGGAGTTTACAGGTCGGAGAAGTTG
                      ____________________________________________________________
consensus             CGCCATTGTTTTTCTTTCTTCAAGAAGACAGGCAAAGGAGTTTACAGGTCGGAGAAGTTG