| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF035G03 | Sequence | 269 | 013035 (9) | ref|XP_009404895.1| | 1e-27 | PREDICTED: ubiquitin-fold modifier 1 [Musa acuminata subsp. malaccensis] | 443 | 013035 (9) | ref|XP_009403690.1| | 6e-52 | PREDICTED: ubiquitin-fold modifier 1-like [Musa acuminata subsp. malaccensis] |
| JMFF040I10 | Sequence | 498 | 013035 (9) | ref|XP_009420575.1| | 7e-49 | PREDICTED: ubiquitin-fold modifier 1-like [Musa acuminata subsp. malaccensis] | 459 | 013035 (9) | ref|XP_009420575.1| | 5e-49 | PREDICTED: ubiquitin-fold modifier 1-like [Musa acuminata subsp. malaccensis] |
| JMFN011D23 | Sequence | 489 | 013035 (9) | ref|XP_009403690.1| | 1e-51 | PREDICTED: ubiquitin-fold modifier 1-like [Musa acuminata subsp. malaccensis] | |||||
| JMFN019J07 | Sequence | 501 | 013035 (9) | ref|XP_009403690.1| | 6e-52 | PREDICTED: ubiquitin-fold modifier 1-like [Musa acuminata subsp. malaccensis] | |||||
| JMFN029D14 | Sequence | 419 | 013035 (9) | ref|XP_003614786.1| | 2e-48 | Ubiquitin-fold modifier [Medicago truncatula] gb|AES97744.1| ubiquitin-fold modi | |||||
| JMFN034K04 | Sequence | 498 | 013035 (9) | ref|XP_009403690.1| | 2e-51 | PREDICTED: ubiquitin-fold modifier 1-like [Musa acuminata subsp. malaccensis] | |||||
| JMFS072B09 | Sequence | 504 | 013035 (9) | ref|XP_009403690.1| | 4e-51 | PREDICTED: ubiquitin-fold modifier 1-like [Musa acuminata subsp. malaccensis] | |||||
This contig is upended
. : . : . : . : . : . :
JMFN011D23+ CTTA
JMFN034K04+ AGCTTA
JMFS072B09+ CTTA
____________________________________________________________
consensus AGCTTA
. : . : . : . : . : . :
JMFN011D23+ GAAGTTCCATGCTATGCTTTAAACTTTAAATGTACTTCAGTTCAAAGTTTAGGACATTTA
JMFN034K04+ GAAGTTCCATGCTATGCTTTAAACTTTAAATGTACTTCAGTTCAAAGTTTAGGACATTTA
JMFS072B09+ GAAGTTCCATGCTATGCTTTAAACTTTAAATGTACTTCAGTTCAAAGTTTAGGACATTTA
JMFF040I10+ AGTTCAAAGTTTAGGACATTTA
rJMFF035G03- TTTA
JMFN019J07+ CAGTTCAAAGTTTAGGACATTTA
____________________________________________________________
consensus GAAGTTCCATGCTATGCTTTAAACTTTAAATGTACTTCAGTTCAAAGTTTAGGACATTTA
. : . : . : . : . : . :
JMFN011D23+ TTCAGCTTAACTTCCCAGTACAGCTCTAGTCTGAGTATAACACTGTAACATAGGAACTTG
JMFN029D14+ CCCAGTACAGCTCTAGTCTGAGTATAACGCTGTAACATAGGAACTTG
JMFN034K04+ TTCAGCTTAACTTCCCAGTACAGCTCTAGTCTGAGTATAACACTGTAACATAGGAACTTG
JMFS072B09+ TTCAGCTTAACTTCCCAGTACAGCTCTAGTCTGAGTATAACACTGTAACATAGGAACTTG
rJMFF040I10- TAACTTCCCAGTACAGCTCTAGTCTGAGTATAACACTGTAACATAGGAACTTG
JMFF040I10+ TTCAGCTTAACTTCCCAGTACAGCTCTAGTCTGAGTATAACACTGTAACATAGGAACTTG
rJMFF035G03- TTCNGCTTAACTTCCCAGTACAGCTCTAGTCTGAGTATAACACTGTAACATAGGAACTTG
JMFN019J07+ TTCAGCTTAACTTCCCAGTACAGCTCTAGTCTGAGTATAACACTGTAACATAGGAACTTG
____________________________________________________________
consensus TTCAGCTTAACTTCCCAGTACAGCTCTAGTCTGAGTATAACACTGTAACATAGGAACTTG
. : . : . : . : . : . :
JMFN011D23+ ACAACAAATTAC-TTGCCAAAAGTAAAATGAGTCTGGAAGATAAGATACAGACTTAGTCT
JMFN029D14+ ACAGCAAATTGCTTTGCCAAAAGTAAAATGAGTCTGGAAGATAAGATACAGGCTTAGTCT
JMFN034K04+ ACAACAAATTAC-TTGCCAAAAGTAAAATGAGTCTGGAAGATAAGATACAGACTTAGTCT
JMFS072B09+ ACAACAAATTAC-TTGCCAAAAGTAAAATGAGTCTGGAAGATAAGATACAGACTTAGTCT
rJMFF040I10- ACAACAAATTAC-TTGCCAAAAGTAAAATGAGTCTGGAAGATAAGATACAGACTTAGTCT
JMFF040I10+ ACAACAAATTAC-TTGCCAAAAGTAAAATGAGTCTGGAAGATAAGATACAGACTTAGTCT
rJMFF035G03- ACAACAAATTAC-TTGCCAAAAGTAAAATGAGTCTGGAAGATAAGATACAGACTTAGTCT
JMFN019J07+ ACAACAAATTAC-TTGCCAAAAGTAAAATGAGTCTGGAAGATAAGATACAGACTTAGTCT
____________________________________________________________
consensus ACAACAAATTAC-TTGCCAAAAGTAAAATGAGTCTGGAAGATAAGATACAGACTTAGTCT
. : . : . : . : . : . :
JMFN011D23+ CTTGACT-AGCTCAAGAGGACACCTTATCCATCTAGGCAGAACCTCCTACCCTATCACGG
JMFN029D14+ CTTGACTGAGCTCAAGAGGACGCCTTATCCATCTAGGCAGAACCTCCTACCCTATCACGG
JMFN034K04+ CTTGACT-AGCTCAAGAGGACACCTTATCCATCTAGGCAGAACCTCCTACCCTATCACGG
JMFS072B09+ CTTGACT-AGCTCAAGAGGACACCTTATCCATCTAGGCAGAACCTCCTACCCTATCACGG
rJMFF040I10- CTTGACT-AGCTCAAGAGGACACCTTATCCATCTAGGCAGAACCTCCTACCCTATCACGG
JMFF040I10+ CTTGACT-AGCTCAAGAGGACACCTTATCCATCTAGGCAGAACCTCCTACCCTATCACGG
rJMFF035G03- CTTGACT-AGCTCAAGAGGACACCTTATCCATCTAGGCAGAACCTCCTACCCTATCACGG
JMFF035G03+ TATCACGG
JMFN019J07+ CTTGACT-AGCTCAAGAGGACACCTTATCCATCTAGGCAGAACCTCCTACCCTATCACGG
____________________________________________________________
consensus CTTGACT-AGCTCAAGAGGACACCTTATCCATCTAGGCAGAACCTCCTACCCTATCACGG
. : . : . : . : . : . :
JMFN011D23+ GGAATCAGGCGCAATTCGGATCCATGTTTGAGGAAAACATTTCCTGCACTTTGTTGAGGG
JMFN029D14+ GGAATCAGGCGCAATTCGGATCCATGTTTGAGGAAAACATTTCCTGCACTTTGTTGAGGG
JMFN034K04+ GGAATCAGGCGCAATTCGGATCCATGTTTGAGGAAAACATTTCCTGCACTTTGTTGAGGG
JMFS072B09+ GGAATCAGGCGCAATTCGGATCCATGTTTGAGGAAAACATTTCCTGCACTTTGTTGAGGG
rJMFF040I10- GGAATCAGGCGCAATTCGGATCCATGTTTGAGGAAAACATTTCCTGCACTTTGTTGAGGG
JMFF040I10+ GGAATCAGGCGCAATTCGGATCCATGTTTGAGGAAAACATTTCCTGCACTTTGTTGAGGG
rJMFF035G03- GGAATCAGGCGCAATTCGGATCCATGTTTGAGGAAAACATTTCCTGCACTTTGTTGAGGG
JMFF035G03+ GGAATCAGGCGCAATTCGGATCCATGTNNGAGGAAAACATTTCCTGCACTTTGNNGAGGG
JMFN019J07+ GGAATCAGGCGCAATTCGGATCCATGTTTGAGGAAAACATTTCCTGCACTTTGTTGAGGG
____________________________________________________________
consensus GGAATCAGGCGCAATTCGGATCCATGTTTGAGGAAAACATTTCCTGCACTTTGTTGAGGG
. : . : . : . : . : . :
JMFN011D23+ TTGATTCCTACTCCATCATTAGTGATGATAGCGCTGGTTTGGGGAGGTACTTTGAATTCC
JMFN029D14+ TTGATTCCTACTCCATCATTAGTGATGATAGCGCTGGTTTGGGGAGGTACTTTGAATTCC
JMFN034K04+ TTGATTCCTACTCCATCATTAGTGATGATAGCGCTGGTTTGGGGAGGTACTTTGAATTCC
JMFS072B09+ TTGATTCCTACTCCATCATTAGTGATGATAGCGCTGGTTTGGGGAGGTACTTTGAATTCC
rJMFF040I10- TTGATTCCTACTCCATCATTAGTGATGATAGCGCTGGTTTGGGGAGGTACTTTGAATTCC
JMFF040I10+ TTGATTCCTACTCCATCATTAGTGATGATAGCGCTGGTTTGGGGAGGTACTTTGAATTCC
rJMFF035G03- TTGATTCCTACTCCATCATTAGTGATGATAGCGCTGGTTTGGGGAGGTACTTTGAATTCC
JMFF035G03+ NNGATTCNTNCTCCATCATTAGTGATGATAGCGGTGNTTTGGGGAGGTACTTTGAATTCC
JMFN019J07+ TTGATTCCTACTCCATCATTAGTGATGATAGCGCTGGTTTGGGGAGGTACTTTGAATTCC
____________________________________________________________
consensus TTGATTCCTACTCCATCATTAGTGATGATAGCGCTGGTTTGGGGAGGTACTTTGAATTCC
. : . : . : . : . : . :
JMFN011D23+ TCGGCGGCGAATTTGAGAACGGCGGTGAATGGGGCGGCCTCCGGGACGCTGAAAACTTTG
JMFN029D14+ TCGGCGGCGAATTTGAGAACGGCGGTGAATGGGGCGGCCTCCGGGACGCGGAAAACTTTG
JMFN034K04+ TCGGCGGCGAATTTGAGAACGGCGGTGAATGGGGCGGCCTCCGGGACGCTGAAAACTTTG
JMFS072B09+ TCGGCGGCGAATTTGAGAACGGCGGTGAATGGGGCGGCCTCCGGGACGCTGAAAACTTTG
rJMFF040I10- TCGGCGGCGAATTTGAGAACGGCGGTGAATGGGGCGGCCTCCGGGACG------ACTTTG
JMFF040I10+ TCGGCGGCGAATTTGAGAACGGCGGTGAATGGGGCGGCCTCCGGGACG------ACTTTG
rJMFF035G03- TCGGCGGCGAATTTGAGAACGGCGGTGAATGGGGCGGCCTCCGGGACGCTGAAAACTTTG
JMFF035G03+ TCGGCGGCGAATTTGAGANCGGCGGNGAATGGGGCGGCCTCCGGGACGCTGAAAACTTTG
JMFN019J07+ TCGGCGGCGAATTTGAGAACGGCGGTGAATGGGGCGGCCTCCGGGACGCTGAAAACTTTG
____________________________________________________________
consensus TCGGCGGCGAATTTGAGAACGGCGGTGAATGGGGCGGCCTCCGGGACGCTGAAAACTTTG
. : . : . : . : . : . :
JMFN011D23+ AAGGGCAGTTTCGGATCGGAAGTGAGGATGACCTTGAACGAAACCTTGCCTCCAGCGCTA
JMFN029D14+ AAGGGCAGTTTCGGATTGGAAGTGAGGATGACCTTGAACGGAGCCTGGCCTCCAGCGCTA
JMFN034K04+ AAGGGCAGTTTCGGATCGGAAGTGAGGATGACCTTGAACGAAACCTTGCCTCCAGCGCTA
JMFS072B09+ AAGGGCAGTTTCGGATCGGAAGTGAGGATGACCTTGAACGAAACCTCGCCTCCAGCGCTA
rJMFF040I10- AAGGGCAGTTTCGGATCGGAAGTGAGGATGACCTTGAACGAAACCTTGCCTCCAGCGCTA
JMFF040I10+ AAGGGCAGTTTCGGATCGGAAGTGAGGATGACCTTGAACGAAACCTTGCCTCCAGCGCTA
rJMFF035G03- AAGGGCAGTTTCGGATCGGAAGTGAGGATGACCTTGAACGAAACCTTGCCTCCAGCGCTA
JMFF035G03+ AAGGGCAGTTTNGGATCGGAAGTGAGGATGACCTTGAACGAAACCTTGCCTCCAGCGCTA
JMFN019J07+ AAGGGCAGTTTCGGATCGGAAGTGAGGATGACCTTGAACGAAACCTTGCCTCCAGCGCTA
____________________________________________________________
consensus AAGGGCAGTTTCGGATCGGAAGTGAGGATGACCTTGAACGAAACCTTGCCTCCAGCGCTA
. : . : . : . : . : . :
JMFN011D23+ GCCAT
JMFN029D14+ GCCATGT
JMFN034K04+ GCCATGTCTTCTTC
JMFS072B09+ GCCATGTCTTCTTCCTCCTTTA
rJMFF040I10- GCCATGTCTTCTTCCTCCTTTACGAGTTGGGCGCAGCTTTGTCGTCGGAGGTCC
JMFF040I10+ GCCATGTCTTCTTCCTCCTTTACGAGTTGGGCGCAGCTTTGTCGTCGGAGGTCC
rJMFF035G03- GCCATGTCTTCTTCCTCCTTT
JMFF035G03+ GCCATGTCTTNTTCCTCCTTT
JMFN019J07+ GCCATGTCTTCTTCCTCCTTTACGAGTTGGGCGCAGCTTTGTCGTCGGAGGTCCGGGCAA
____________________________________________________________
consensus GCCATGTCTTCTTCCTCCTTTACGAGTTGGGCGCAGCTTTGTCGTCGGAGGTCCGGGCAA