Contig 013032:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN017O22Sequence562013032 (2)gb|KJB21496.1|5e-54hypothetical protein B456_004G230600 [Gossypium raimondii] gb|KJB21497.1| hypoth
JMSF002E08Sequence700013032 (2)gb|KDP32475.1|5e-51hypothetical protein JCGZ_13400 [Jatropha curcas]

Alignment

This contig is upended


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rJMSF002E08-                                                       CATTGCTGGTGCTTG
                      ____________________________________________________________
consensus                                                          CATTGCTGGTGCTTG
 
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rJMSF002E08-          TTCATCATCATCATTGAAACATAAAGACGAAACTCCGCTACCACCAAAATATAGAGCTAG
                      ____________________________________________________________
consensus             TTCATCATCATCATTGAAACATAAAGACGAAACTCCGCTACCACCAAAATATAGAGCTAG
 
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rJMSF002E08-          ATCGAAGGTCAAACATCTCCTAAACCATCATATCATTATTTCAAATCCTACATTTTACCA
                      ____________________________________________________________
consensus             ATCGAAGGTCAAACATCTCCTAAACCATCATATCATTATTTCAAATCCTACATTTTACCA
 
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rJMSF002E08-          GCAAACAGGCCGGCAGCACTGAAACAAATATCTTTTTGCTGCGAAACGCCTGTGAATTTT
                      ____________________________________________________________
consensus             GCAAACAGGCCGGCAGCACTGAAACAAATATCTTTTTGCTGCGAAACGCCTGTGAATTTT
 
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rJMSF002E08-          ACCACTACTCTCTTCAATAGCACAACACAGATGTATGCGTACATTGTGATGGACGAATTT
JMFN017O22+                                                 GTACATTGTGATGGACGAATTT
                      ____________________________________________________________
consensus             ACCACTACTCTCTTCAATAGCACAACACAGATGTATGCGTACATTGTGATGGACGAATTT
 
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rJMSF002E08-          CAGGTGCTGCCACCCCTTCTCGGGACCGGTTTGTAAAGCACGACGGTGACGTATTTTGAG
JMFN017O22+           CAGGTGCTGCCACCCCTTCTCGGGACCGGTTTGTAAAGCACGACGGTGACGTATTTTGAG
                      ____________________________________________________________
consensus             CAGGTGCTGCCACCCCTTCTCGGGACCGGTTTGTAAAGCACGACGGTGACGTATTTTGAG
 
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rJMSF002E08-          CGGAAGCGATGCGTTGTACCTAGTGCCACCACGGTTCTTGGTGTTTCTCGGTTGCTGTTC
JMFN017O22+           CGGAAGCGATGCGTTGTACCTAGTGCCACCACGGTTCTTGGTGTTTCTCGGTTGCTGTTC
                      ____________________________________________________________
consensus             CGGAAGCGATGCGTTGTACCTAGTGCCACCACGGTTCTTGGTGTTTCTCGGTTGCTGTTC
 
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rJMSF002E08-          TCGATGTAAAGATGGTTTAGGACCACGTTCTGTGGGGACGGGAGGGATGCAGATTGGTCT
JMFN017O22+           TCGATGTAAAGATGGTTTAGGACCACGTTCTGTGGGGACGGGAGGGATGCAGATTGGTCT
                      ____________________________________________________________
consensus             TCGATGTAAAGATGGTTTAGGACCACGTTCTGTGGGGACGGGAGGGATGCAGATTGGTCT
 
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rJMSF002E08-          CTGTTTGCTGGGTGGTTCAGCACGGTCTGGTGCAGGTGCGGGGGGAATAGAGGTGGTTCC
JMFN017O22+           CTGTTTGCTGGGTGGTTCAGCACGGTCTGGTGCAGGTGCGGGGGGAATAGAGGTGGTTCC
                      ____________________________________________________________
consensus             CTGTTTGCTGGGTGGTTCAGCACGGTCTGGTGCAGGTGCGGGGGGAATAGAGGTGGTTCC
 
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rJMSF002E08-          CGCCCCTCATCTTCATTCCCGGGGTACACGTTGTTGTAGCTTGAATCAGGTGATCTCGGA
JMFN017O22+           CGCCCCTCATCTTCATTCCCGGGGTACACGTTGTTGTAGCTTGAATCAGGTGATCTCGGA
                      ____________________________________________________________
consensus             CGCCCCTCATCTTCATTCCCGGGGTACACGTTGTTGTAGCTTGAATCAGGTGATCTCGGA
 
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rJMSF002E08-          ACTTCAAATCCCATGACAGTTACTTCATC                               
JMFN017O22+           ACTTCAAATCCCATGACAGTTACTTCATCATGATCTTCTTTATATTGGCGGTTCATTTTG
                      ____________________________________________________________
consensus             ACTTCAAATCCCATGACAGTTACTTCATCATGATCTTCTTTATATTGGCGGTTCATTTTG
 
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JMFN017O22+           AACGCAGTGTAGCAATGGCTAGCCAAGGATGTAAGCTGTCAGTAACCAGTGCTTCTCCAA
                      ____________________________________________________________
consensus             AACGCAGTGTAGCAATGGCTAGCCAAGGATGTAAGCTGTCAGTAACCAGTGCTTCTCCAA
 
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JMFN017O22+           TTGGAAGAACCTAATTTAGCTATCCGCGGCTCTGCAATATCCAATCAACAGATTCTCCTT
                      ____________________________________________________________
consensus             TTGGAAGAACCTAATTTAGCTATCCGCGGCTCTGCAATATCCAATCAACAGATTCTCCTT
 
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JMFN017O22+           ATATCCCAGACATCACCTGAAAAACGGAACAAAACAAAAACCTAGGCGGAGAGAAGAGAA
                      ____________________________________________________________
consensus             ATATCCCAGACATCACCTGAAAAACGGAACAAAACAAAAACCTAGGCGGAGAGAAGAGAA