| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF036A08 | Sequence | 470 | 013031 (5) | gb|KJB40530.1| | 4e-87 | hypothetical protein B456_007G068200 [Gossypium raimondii] | 688 | 013031 (5) | ref|XP_009624308.1| | 2e-124 | PREDICTED: proteasome subunit alpha type-4 [Nicotiana tomentosiformis] ref|XP_00 |
| JMFF036O07 | Sequence | 558 | 013031 (5) | ref|XP_006429795.1| | 3e-112 | hypothetical protein CICLE_v10013771mg [Citrus clementina] gb|ESR43035.1| hypoth | 706 | 013031 (5) | ref|XP_009624308.1| | 2e-118 | PREDICTED: proteasome subunit alpha type-4 [Nicotiana tomentosiformis] ref|XP_00 |
| JMFN017K13 | Sequence | 605 | 013031 (5) | ref|XP_006429795.1| | 9e-123 | hypothetical protein CICLE_v10013771mg [Citrus clementina] gb|ESR43035.1| hypoth | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF036O07- ATGA
____________________________________________________________
consensus ATGA
. : . : . : . : . : . :
rJMFF036O07- CCAAACAAGTTCCCAAACATAATTGAACAGTAAGTACCTAATTAACCATTGAACAATCCA
rJMFF036A08- CCA
____________________________________________________________
consensus CCAAACAAGTTCCCAAACATAATTGAACAGTAAGTACCTAATTAACCATTGAACAATCCA
. : . : . : . : . : . :
rJMFF036O07- TAGTTTAAAAAGAAGTACAAGCATGGTCTGAGAAGAGAGTTAAAATCATATGAAGTGGTT
rJMFF036A08- TAGTTTAAAAAGAAGTACAAGCATGGTCTGAGAAGAGAGTTAAAATCATATGAAGTGGTT
____________________________________________________________
consensus TAGTTTAAAAAGAAGTACAAGCATGGTCTGAGAAGAGAGTTAAAATCATATGAAGTGGTT
. : . : . : . : . : . :
rJMFF036O07- TTAGGTCTCCACGGTGGGTTGGGTCAACCCAAGCTTCGCAAGCAATTTATTCAGGGACTC
rJMFF036A08- TTAGGTCTCCACGGTGGGTTGGGTCAACCCAAGCTTCGCAAGCAATTTATTCAGGGACTC
____________________________________________________________
consensus TTAGGTCTCCACGGTGGGTTGGGTCAACCCAAGCTTCGCAAGCAATTTATTCAGGGACTC
. : . : . : . : . : . :
rJMFF036O07- TGGTGAGTGCACTAGGTACTTAACATCTCCATTAGAGAGGAATACCTCGGCCAATTCGAG
rJMFF036A08- TGGTGAGTGCACTAGGTACTTAACATCTCCATTAGAGAGGAATACCTCGGCCAATTCGAG
____________________________________________________________
consensus TGGTGAGTGCACTAGGTACTTAACATCTCCATTAGAGAGGAATACCTCGGCCAATTCGAG
. : . : . : . : . : . :
rJMFF036O07- CTTCTCTGAAGTAAGACTTGTGCTATCCATTGTCTTGCTAAGCACCTTGAGAGCGAGCTG
rJMFF036A08- CTTCTCTGAAGTAAGACTTGTGCTATCCATTGTCTTGCTAAGCACCTTGAGAGCGAGCTG
____________________________________________________________
consensus CTTCTCTGAAGTAAGACTTGTGCTATCCATTGTCTTGCTAAGCACCTTGAGAGCGAGCTG
. : . : . : . : . : . :
rJMFF036O07- AACAGCCTCCTCCCTCGTGATCTCATCCTTGTAGTCCTGCTTTAGCATTGATTGTGCCGC
rJMFF036A08- AACAGCCTCCTCCCTCGTGATCTCATCCTTGTAGTCCTGCTTTAGCATTGATTGTGCCGC
JMFN017K13+ GCCGC
____________________________________________________________
consensus AACAGCCTCCTCCCTCGTGATCTCATCCTTGTAGTCCTGCTTTAGCATTGATTGTGCCGC
. : . : . : . : . : . :
rJMFF036O07- TTGATTGTTTGCTCCAATTGCTGCAGCCTTCCATCCTCCATAGTTTCCGCTTGGGTCACT
rJMFF036A08- TTGATTGTTTGCTCCAATTGCTGCAGCCTTCCATCCTCCATAGTTTCCGCTTGGGTCACT
JMFF036O07+ CCTCCATAGTTTCCGCTTGGGTCACT
JMFN017K13+ TTGATTGTTTGCTCCAATTGCTGCAGCCTTCCATCCTCCATAGTTTCCGCTTGGGTCACT
____________________________________________________________
consensus TTGATTGTTTGCTCCAATTGCTGCAGCCTTCCATCCTCCATAGTTTCCGCTTGGGTCACT
. : . : . : . : . : . :
rJMFF036O07- CATGTAGAGCTGGAAGCCATAGTTCTTATCCCATCCTGCAAAGAGAAAAGAAACTCCGAA
rJMFF036A08- CATGTAGAGCTGGAAGCCATAGTTCTTATCCCATCCTGCAAAGAGAAAAGAAACTCCGAA
JMFF036O07+ CATGTAGAGCTGGAAGCCATAGTTCTTATCCCATCCTGCAAAGAGAAAAGAAACTCCGAA
JMFN017K13+ CATGTAGAGCTGGAAGCCATAGTTCTTATCCCATCCTGCAAAGAGAAAAGAAACTCCGAA
____________________________________________________________
consensus CATGTAGAGCTGGAAGCCATAGTTCTTATCCCATCCTGCAAAGAGAAAAGAAACTCCGAA
. : . : . : . : . : . :
rJMFF036O07- TGGACGGAGACCACCAAACTGCGTGTAGCCTTGTTTAGTGTCACATAGAGACTGAACGAG
rJMFF036A08- TGGACGGAGACCACCAAACTGCGTGTAGCCTTGTTTAGTGTCACATAGAGACTGAACGAG
JMFF036O07+ TGGACGGAGACCACCAAACTGCGTGTAGCCTTGTTTAGTGTCACATAGAGACTGAACGAG
JMFF036A08+ GACGGAGACCACCAAACTGCGTGTAGCCTTGTTTAGTGTCACATAGAGACTGAACGAG
JMFN017K13+ TGGACGGAGACCACCAAACTGCGTGTAGCCTTGTTTAGTGTCACATAGAGACTGAACGAG
____________________________________________________________
consensus TGGACGGAGACCACCAAACTGCGTGTAGCCTTGTTTAGTGTCACATAGAGACTGAACGAG
. : . : . : . : . : . :
rJMFF036O07- CTGTTCGACAGGCATTGGTTCTTGGTAAGCATAAGTATATCGTTGAGCCTGGACCCTAGC
rJMFF036A08- CTGTTCGACAGGCATTGGTTCTTGGTAAGCATAAGTATATCGTTGAGCCTGGACCCTAGC
JMFF036O07+ CTGTTCGACAGGCATTGGTTCTTGGTAAGCATAAGTATATCGTTGAGCCTGGACCCTAGC
JMFF036A08+ CTGTTCGACAGGCATTGGTTCTTGGTAAGCATAAGTATATCGTTGAGCCTGGACCCTAGC
JMFN017K13+ CTGTTCGACAGGCATTGGTTCTTGGTAAGCATAAGTATATCGTTGAGCCTGGACCCTAGC
____________________________________________________________
consensus CTGTTCGACAGGCATTGGTTCTTGGTAAGCATAAGTATATCGTTGAGCCTGGACCCTAGC
. : . : . : . : . : . :
rJMFF036O07- AGTGTTAATAAGAATGTTGGCATCAGACATTATTCCCGCGACAGCACATGCCACATGGTC
rJMFF036A08- AGTGTTAATAAGAATGTTGGCATCAGACATTATTCCCGCGACAGCACATGCCACATGGTC
JMFF036O07+ AGTGTTAATAAGAATGTTGGCATCAGACATTATTCCCGCGACAGCACATGCCACATGGTC
JMFF036A08+ AGTGTTAATAAGAATGTTGGCATCAGACATTATTCCCGCGACAGCACATGCCACATGGTC
JMFN017K13+ AGTGTTAATAAGAATGTTGGCATCAGACATTATTCCCGCGACAGCACATGCCACATGGTC
____________________________________________________________
consensus AGTGTTAATAAGAATGTTGGCATCAGACATTATTCCCGCGACAGCACATGCCACATGGTC
. : . : . : . : . : . :
rJMFF036O07- ATCAATCTTGTACATCTTCTCTGTANATGTTGATGTCTGAAG
rJMFF036A08- ATCAATCTTGTACATCTTCTCTGTANATGTTGATGTCTGAAGAAGCTTGGAAGTGACCTT
JMFF036O07+ ATCAATCTTGTACATCTTCTCTGTAGATGTTGATGTCTGAAGAAGCTTGGAAGTGACCTT
JMFF036A08+ ATCAATCTTGTACATCTTCTCTGTAGATGTTGATGTCTGAAGAAGCTTGGAAGTGACCTT
JMFN017K13+ ATCAATCTTGTACATCTTCTCTGTAGATGTTGATGTCTGAAGAAGCTTGGAAGTGACCTT
____________________________________________________________
consensus ATCAATCTTGTACATCTTCTCTGTAGATGTTGATGTCTGAAGAAGCTTGGAAGTGACCTT
. : . : . : . : . : . :
rJMFF036A08- CTTTTC
JMFF036O07+ CTTTTCACCAACCAACACAACTCCATCTTTAGATAATATGCCTATGGCACTGCCAGCATT
JMFF036A08+ CTTTTCACCAACCAACACAACTCCATCTTTAGATAATATGCCTATGGCACTGCCAGCATT
JMFN017K13+ CTTTTCACCAACCAACACAACTCCATCTTTAGATAATATGCCTATGGCACTGCCAGCATT
____________________________________________________________
consensus CTTTTCACCAACCAACACAACTCCATCTTTAGATAATATGCCTATGGCACTGCCAGCATT
. : . : . : . : . : . :
JMFF036O07+ TCCAATTGCCTCCATTGCATACTCAACCTGGTACAGACGACCTTCGGGAGAGAAGATAGT
JMFF036A08+ TCCAATTGCCTCCATTGCATACTCAACCTGGTACAGACGACCTTCGGGAGAGAAGATAGT
JMFN017K13+ TCCAATTGCCTCCATTGCATACTCAACCTGGTACAGACGACCTTCGGGAGAGAAGATAGT
____________________________________________________________
consensus TCCAATTGCCTCCATTGCATACTCAACCTGGTACAGACGACCTTCGGGAGAGAAGATAGT
. : . : . : . : . : . :
JMFF036O07+ TGTACGGCTATCATACCTTCGCGACATTGTGAATTCTGATGAGTTGCAGAGCACTGGATT
JMFF036A08+ TGTACGGCTATCATACCTTCGCGACATTGTGAATTCTGATGAGTTGCAGAGCACTGGATT
JMFN017K13+ TGTACGGCTATCATACCTTCGCGACATTGTGAATTCTGATGAGTTGCAGAGCACTGGATT
____________________________________________________________
consensus TGTACGGCTATCATACCTTCGCGACATTGTGAATTCTGATGAGTTGCAGAGCACTGGATT
. : . : . : . : . : . :
JMFF036O07+ TTCAGAATTGAGTGAGTCGACTCTGAGCTTAGCCTCCTTCTAATCCCTATGT
JMFF036A08+ TTCAGAATTGAGTGAGTCGACTCTGAGCTTAGCCTCCTTCTAATCCCTATGT
JMFN017K13+ TTCAGAATTGAGTGAGTCGACTCTGAGCTTAGCCTCCTTCTAATCCCTATGTATTTCTTC
____________________________________________________________
consensus TTCAGAATTGAGTGAGTCGACTCTGAGCTTAGCCTCCTTCTAATCCCTATGTATTTCTTC