Contig 013029:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN046J06-                                               AACATGGTAGCTCATATCATTTTC
                      ____________________________________________________________
consensus                                                 AACATGGTAGCTCATATCATTTTC
 
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JMFN046J06-           TAGTTCAGAGTAGCTTAAAACCCCACAAGGCAACACTACAGGAGGCCTTTCAAACATATA
                      ____________________________________________________________
consensus             TAGTTCAGAGTAGCTTAAAACCCCACAAGGCAACACTACAGGAGGCCTTTCAAACATATA
 
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JMFN046J06-           GAAAAGATGAGGGACCAAATTAAAAAAAAACACAAAAAACCTCTTCCAATTTTCCTTTGT
                      ____________________________________________________________
consensus             GAAAAGATGAGGGACCAAATTAAAAAAAAACACAAAAAACCTCTTCCAATTTTCCTTTGT
 
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JMFN046J06-           ACCGCCTCAATCTTTCTTCTTCTCCTATTTTACACCCCAAATCTTTTCAAAGTTTCTACT
                      ____________________________________________________________
consensus             ACCGCCTCAATCTTTCTTCTTCTCCTATTTTACACCCCAAATCTTTTCAAAGTTTCTACT
 
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JMFN046J06-           TCCACCCCTAACCCTAAAGTTAACCTAACAAGCTAAAACTACATGAAAAGCTCAAACTGC
JMFS044H11+                                   CTAACAAGCTAAAACTACATGAAAAGCTCAGACTGC
JMFN015L03+                                             AAAACTACATGAAAAGCTCAGACTGC
                      ____________________________________________________________
consensus             TCCACCCCTAACCCTAAAGTTAACCTAACAAGCTAAAACTACATGAAAAGCTCAGACTGC
 
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JMFN046J06-           AGCAATGAATAGTAGTTAGCAGATTGATCTTCAAACTCCCACAACCCATCATCACACAAA
JMFS044H11+           AGCAATGAATAGTAGTTAGCAGATTGATCTTCAAACTCCCACAACCCATCATCACACAAA
JMFN015L03+           AGCAATGAATAGTAGTTAGCAGATTGATCTTCAAACTCCCACAACCCATCATCACACAAA
                      ____________________________________________________________
consensus             AGCAATGAATAGTAGTTAGCAGATTGATCTTCAAACTCCCACAACCCATCATCACACAAA
 
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JMFN046J06-           GAAAACGGAAAATCCTGGCCGTCCGTCCCATTCTCGTCCGCGTTATCGCCGCCGTCCGTC
JMFS044H11+           GAGAACGGAAAATCCTGGCCGTCCGTCCCATTCTCGTCCGCGTTATCGCCGCCGTCCGTC
JMFN015L03+           GAGAACGGAAAATCCTGGCCGTCCGTCCCATTCTCGTCCGCGTTATCGCCGCCGTCCGTC
                      ____________________________________________________________
consensus             GAGAACGGAAAATCCTGGCCGTCCGTCCCATTCTCGTCCGCGTTATCGCCGCCGTCCGTC
 
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JMFN046J06-           CCGAGATTCGGGATCCCGAGCTCGTCGTCAGACGCTTCCA                    
JMFS044H11+           CCGAGATTCGGGATCCCGAGCTCGTCGTCAGACGCTTCCAGAAGGTGCCTGATGACGTCG
JMFN015L03+           CCGAGATTCGGGATCCCGAGCTCGTCGTCAGACGCTTCCAGAAGGTGCCTGATGACGTCG
                      ____________________________________________________________
consensus             CCGAGATTCGGGATCCCGAGCTCGTCGTCAGACGCTTCCAGAAGGTGCCTGATGACGTCG
 
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JMFS044H11+           ATTCTGTCGTCATCTTCCGCGGAGCTAGGATCCGGGCTCACCGGCGCCCCGGTAACTCGC
JMFN015L03+           ATTCTGTCGTCATCTTCCGCGGAGCTAGGATCCGGGCTCACCGGCGCCCCGGTAACTCGC
                      ____________________________________________________________
consensus             ATTCTGTCGTCATCTTCCGCGGAGCTAGGATCCGGGCTCACCGGCGCCCCGGTAACTCGC
 
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JMFS044H11+           CGGTCGGCCTCCACTTCGCCGGCCGGGTCTCCGAGCACCGCCCCAAATTCCGACGAAAAT
JMFN015L03+           CGGTCGGCCTCCACTTCGCCGGCCGGGTCTCCGAGCACCGCCCCAAATTCCGACGAAAAT
                      ____________________________________________________________
consensus             CGGTCGGCCTCCACTTCGCCGGCCGGGTCTCCGAGCACCGCCCCAAATTCCGACGAAAAT
 
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JMFS044H11+           TCCGACGAAGAAGAAGAAGAAGAAGAGATCTCCTGTTGAAGAGTTGTGAAAATCCCCAAC
JMFN015L03+           TCCGACGAAGAAGAAGAAGAAGAAGAGATCTCCTGTTGAAGAGTTGTGAAAATCCCCAAC
                      ____________________________________________________________
consensus             TCCGACGAAGAAGAAGAAGAAGAAGAGATCTCCTGTTGAAGAGTTGTGAAAATCCCCAAC
 
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JMFS044H11+           TCGGCTTCGACTTGTTGGGCCGTGTTTGGCTCCTCTTCTTCTTCATCTTCCAGAATGGAG
JMFN015L03+           TCGGCTTCGACTTGTTGGGCCGTGTTTGGCTCCTCTTCTTCTTCATCTTCCAGAATGGAG
                      ____________________________________________________________
consensus             TCGGCTTCGACTTGTTGGGCCGTGTTTGGCTCCTCTTCTTCTTCATCTTCCAGAATGGAG
 
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JMFS044H11+           AGGATGTGATCGTACGGCTTGCAGCGCTTCGACATTTCTCCTTCCGTTTCTTCTCGGCTT
JMFN015L03+           AGGATGTGATCGTACGGCTTGCAGCGCTTCGACATTTCTCCTTCCGTTTCTTCTCGGCTT
                      ____________________________________________________________
consensus             AGGATGTGATCGTACGGCTTGCAGCGCTTCGACATTTCTCCTTCCGTTTCTTCTCGGCTT
 
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JMFS044H11+           TCCTCTCTTTGCCGCTTCTCAGCCATTTTTAGAGAGAGAAAGGAGCCGTATATAACAACT
JMFN015L03+           TCCTCTCTTTGCCGCTTCTCAGCCATTTTTAGAGAGAGAAAGGAGCCGTATATAACAACT
                      ____________________________________________________________
consensus             TCCTCTCTTTGCCGCTTCTCAGCCATTTTTAGAGAGAGAAAGGAGCCGTATATAACAACT
 
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JMFS044H11+           ATATATTTGTGTGTCTATAGAGAGAGAGAGAGAGAGAGATAAAGC               
JMFN015L03+           ATATATTTGTGTGTCTATAGAGAGAGAGAGAGAGAGAGATAAAGCGAGAGAGAGATAAAG
                      ____________________________________________________________
consensus             ATATATTTGTGTGTCTATAGAGAGAGAGAGAGAGAGAGATAAAGCGAGAGAGAGATAAAG