| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN014L14 | Sequence | 609 | 013026 (6) | ref|XP_004229778.1| | 1e-62 | PREDICTED: GATA transcription factor 4 [Solanum lycopersicum] | |||||
| JMFN029G17 | Sequence | 563 | 013026 (6) | ref|XP_004229778.1| | 5e-48 | PREDICTED: GATA transcription factor 4 [Solanum lycopersicum] | |||||
| JMFN029I13 | Sequence | 552 | 013026 (6) | ref|XP_004229778.1| | 4e-48 | PREDICTED: GATA transcription factor 4 [Solanum lycopersicum] | |||||
| JMFN036H24 | Sequence | 529 | 013026 (6) | ref|XP_009591827.1| | 5e-47 | PREDICTED: GATA transcription factor 4-like [Nicotiana tomentosiformis] | |||||
| JMFN038G04 | Sequence | 631 | 013026 (6) | ref|XP_004229778.1| | 8e-63 | PREDICTED: GATA transcription factor 4 [Solanum lycopersicum] | |||||
| JMFN039J17 | Sequence | 641 | 013026 (6) | ref|XP_004229778.1| | 5e-52 | PREDICTED: GATA transcription factor 4 [Solanum lycopersicum] | |||||
This contig is upended
. : . : . : . : . : . :
JMFN029G17+ GAG
JMFN039J17+ TGCAGATATTTCAGCACAAAAGATATAAATAATTAATTAAAAAGTGTGAG
____________________________________________________________
consensus TGCAGATATTTCAGCACAAAAGATATAAATAATTAATTAAAAAGTGTGAG
. : . : . : . : . : . :
JMFN029I13+ GGAAATTTTCTGAGAATCGAAAAAAGAAAAAAGCGAAAATAAAGAAAAGCGA
JMFN029G17+ TACTCAGCGGAAATTTTCTGAGAATCGAAAAAAGAAAAAAGCGAAAATAAAGAAAAGCGA
JMFN039J17+ TACTCAGCGGAAATTTTCTGAGAATCGAAAAAAGAAAAAAGCGAAAATAAAGAAAAGCGA
JMFN038G04+ GAGAATCGAAAAAAGAAAAAAGCGAAAATAAAGAAAAGCGA
JMFN014L14+ GAAAAGCGA
____________________________________________________________
consensus TACTCAGCGGAAATTTTCTGAGAATCGAAAAAAGAAAAAAGCGAAAATAAAGAAAAGCGA
. : . : . : . : . : . :
JMFN029I13+ GCATGGGATATGGCGATAACACGTGCGGGGGGAGCTAGCTGGCGTCAGCAGACCTGAAAG
JMFN029G17+ GCATGGGATATGGCGATAACACGTGCGGGGGGAGCTAGCTGGCGTCAGCAGACCTGAAAG
JMFN039J17+ GCATGGGATATGGCGATAACACGTGCGGGGGGAGCTAGCTGGCGTCAGCAGACCTGAAAG
JMFN036H24+ GAAAG
JMFN038G04+ GCATGGGATATGGCGATAACACGTGCGGGGGGAGCTAGCTGGCGTCAGCAGACCTGAAAG
JMFN014L14+ GCATGGGATATGGCGATAACACGTGCGGGGGGAGCTAGCTGGCGTCAGCAGACCTGAAAG
____________________________________________________________
consensus GCATGGGATATGGCGATAACACGTGCGGGGGGAGCTAGCTGGCGTCAGCAGACCTGAAAG
. : . : . : . : . : . :
JMFN029I13+ TGACGACCGTACATCTCCTGTTGCTGCTGCTGCTGTTGCTGTTGCTGTTGACGGAAGAGC
JMFN029G17+ TGACGACCGTACATCTCCTGTTGCTGCTGCTGCTGTTGCTGTTGCTGTTGACGGAAGAGC
JMFN039J17+ TGACGACCGTACATCTCCTGTTGCTGCTGCTGCTGTTGCTGTTGCTGTTGACGGAAGAGC
JMFN036H24+ TGACGACCGTACATCTCCTGTTGCTGCTGCTGCTGTGCTGGTTGCTGTTGACGGAAGAGC
JMFN038G04+ TGACGACCGTACATCTCCTGTTGCTGCTGCTGCTGTTGCTGTTGCTGTTGACGGAAGAGC
JMFN014L14+ TGACGACCGTACATCTCCTGTTGCTGCTGCTGCTGTTGCTGTTGCTGTTGACGGAAGAGC
____________________________________________________________
consensus TGACGACCGTACATCTCCTGTTGCTGCTGCTGCTGTTGCTGTTGCTGTTGACGGAAGAGC
. : . : . : . : . : . :
JMFN029I13+ TCCTTCTGGCGGCGGAGCTCCATGACTTTCCGGTGAGAGTTGGAGTGCTGAGTGAGCACG
JMFN029G17+ TCCTTCTGGCGGCGGAGCTCCATGACTTTCCGGTGAGAGTTGGAGTGCTGAGTGAGCACG
JMFN039J17+ TCCTTCTGGCGGCGGAGCTCCATGACTTTCCGGTGAGAGTTGGAGTGCTGAGTGAGCACG
JMFN036H24+ TCCTTCTGGCGGCGGAGCTCCATGACTTTCCGGTGAGAGTTGGAGTGCTGAGTGAGCACG
JMFN038G04+ TCCTTCTGGCGGCGGAGCTCCATGACTTTCCGGTGAGAGTTGGAGTGCTGAGTGAGCACG
JMFN014L14+ TCCTTCTGGCGGCGGAGCTCCATGACTTTCCGGTGAGAGTTGGAGTGCTGAGTGAGCACG
____________________________________________________________
consensus TCCTTCTGGCGGCGGAGCTCCATGACTTTCCGGTGAGAGTTGGAGTGCTGAGTGAGCACG
. : . : . : . : . : . :
JMFN029I13+ AAGGTGGGGCTAGCGGCGGGGCGGTACTCCGGGACGAGGCGGCCGGACTTGAAACGGACG
JMFN029G17+ AAGGTGGGGCTAGCGGCGGGGCGGTACTCCGGGACGAGGCGGCCGGACTTGAAACGGACG
JMFN039J17+ AAGGTGGGGCTAGCGGCGGGGCGGTACTCCGGGACGAGGCGGCCGGACTTGAAACGGACG
JMFN036H24+ AAGGTGGGGCTAGCGGCGGGGCGGTACTCCGGGACGAGGCGGCCGGACTTGAAACGGACG
JMFN038G04+ AAGGTGGGGCTAGCGGCGGGGCGGTACTCCGGGACGAGGCGGCCGGACTTGAAACGGACG
JMFN014L14+ AAGGTGGGGCTAGCGGCGGGGCGGTACTCCGGGACGAGGCGGCCGGACTTGAAACGGACG
____________________________________________________________
consensus AAGGTGGGGCTAGCGGCGGGGCGGTACTCCGGGACGAGGCGGCCGGACTTGAAACGGACG
. : . : . : . : . : . :
JMFN029I13+ CCGCAGGCGTTGCAAAGCGTCTTGGGGCCCAGCGGTCCGGTCCGCCACTGCGGCGTCTTC
JMFN029G17+ CCGCAGGCGTTGCAAAGCGTCTTGGGGCCCAGCGGTCCGGTCCGCCACTGCGGCGTCTTC
JMFN039J17+ CCGCAGGCGTTGCAAAGCGTCTTGGGGCCCAGCGGTCCGGTCCGCCACTGCGGCGTCTTC
JMFN036H24+ CCGCAGGCGTTGCAAAGCGTCTTGGGGCCCAGCGGTCCGGTCCGCCACTGCGGCGTCTTC
JMFN038G04+ CCGCAGGCGTTGCAAAGCGTCTTGGGGCCCAGCGGTCCGGTCCGCCACTGCGGCGTCTTC
JMFN014L14+ CCGCAGGCGTTGCAAAGCGTCTTGGGGCCCAGCGGTCCGGTCCGCCACTGCGGCGTCTTC
____________________________________________________________
consensus CCGCAGGCGTTGCAAAGCGTCTTGGGGCCCAGCGGTCCGGTCCGCCACTGCGGCGTCTTC
. : . : . : . : . : . :
JMFN029I13+ TCGGAGGCGCAGTGCGTGCATCTGCGCGGCACGTCCTCGGAACTCTCTCGCTTCTTATTG
JMFN029G17+ TCGGAGGCGCAGTGCGTGCATCTGCGCGGCACGTCCTCGGAACTCTCTCGCTTCTTATTG
JMFN039J17+ TCGGAGGCGCAGTGCGTGCATCTGCGCGGCACGTCCTCGGAACTCTCTCGCTTCTTATTG
JMFN036H24+ TCGGAGGCGCAGTGCGTGCATCTGCGCGGCACGTCCTCGGAACTCTCTCGCTTCTTATTG
JMFN038G04+ TCGGAGGCGCAGTGCGTGCATCTGCGCGGCACGTCCTCGGAACTCTCTCGCTTCTTATTG
JMFN014L14+ TCGGAGGCGCAGTGCGTGCATCTGCGCGGCACGTCCTCGGAACTCTCTCGCTTCTTATTG
____________________________________________________________
consensus TCGGAGGCGCAGTGCGTGCATCTGCGCGGCACGTCCTCGGAACTCTCTCGCTTCTTATTG
. : . : . : . : . : . :
JMFN029I13+ TTGGAGATCTCGTGAGTAACCGTCTCCTGCGGCGGCGGCGGCGGCTGCATTGCGGCGGTC
JMFN029G17+ TTGGAGATCTCGTGAGTAACCGTCTCCTGCGGCGGCGGCGGCGGCTGCATTGCGGCGGTC
JMFN039J17+ TTGGAGATCTCGTGAGTAACCGTCTCCTGCGGCGGCGGCGGCGGCTGCATTGCGGCGGTC
JMFN036H24+ TTGGAGATCTCGTGAGTAACCGTCTCCTGCGGCGGCGGCGGCGGCTGCATTGCGGCGGTC
JMFN038G04+ TTGGAGATCTCGTGAGTAACCGTCTCCTGCGGCGGCGGCGGCGGCTGCATTGCGGCGGTC
JMFN014L14+ TTGGAGATCTCGTGAGTAACCGTCTCCTGCGGCGGCGGCGGCGGCTGCATTGCGGCGGTC
____________________________________________________________
consensus TTGGAGATCTCGTGAGTAACCGTCTCCTGCGGCGGCGGCGGCGGCTGCATTGCGGCGGTC
. : . : . : . : . : . :
JMFN029I13+ CATCCTGTAGCGGCGGATCGGGATCGCTTGCTCCTGGACCGGCC-TGAAACGCCGCGCTG
JMFN029G17+ CATCCTGTAGCGGCGGATCGGGATCGCTTGCTCCTGGACCGGCC-TGAAACGCCGCGCTG
JMFN039J17+ CATCCTGTAGCGGCGGATCGGGATCGCTTGCTCCTGGACCGGCCTTGAAACGCCGCGCTG
JMFN036H24+ CATCCTGTAGCGGCGGATGGGGATCGCTTGTTCCTGGACCGGCC-TCACCCGCCGGGNTG
JMFN038G04+ CATCCTGTAGCGGCGGATCGGGATCGCTTGCTCCTGGACCGGCCTTGAAACGCCGCGCTG
JMFN014L14+ CATCCTGTAGCGGCGGATCGGGATCGCTTGCTCCTGGACCGGCCTTGAAACGCCGCGCTG
____________________________________________________________
consensus CATCCTGTAGCGGCGGATCGGGATCGCTTGCTCCTGGACCGGCCTTGAAACGCCGCGCTG
. : . : . : . : . : . :
JMFN029I13+ CTCGCCGTCAGATTCATCGTC
JMFN029G17+ CTCGCCGTCAGATTCATCGTC
JMFN039J17+ CTCGCCGTCAGATTCATCGTCGAGTTCGCCGCAATGTCGCTGAACGAATCC
JMFN036H24+ CTCGCCGTCAGATTCATCGTCGAGTTCGCCGCAATGTCGCTGAACGAATCCTCCACAAAC
JMFN038G04+ CTCGCCGTCAGATTCATCGTCGAGTTCGCCGCAATGTCGCTGAACGAATCCTCCACAAAC
JMFN014L14+ CTCGCCGTCAGATTCATCGTCGAGTTCGCCGCAATGTCGCTGAACGAATCCTCCACAAAC
____________________________________________________________
consensus CTCGCCGTCAGATTCATCGTCGAGTTCGCCGCAATGTCGCTGAACGAATCCTCCACAAAC
. : . : . : . : . : . :
JMFN036H24+ GTCGATAGCCATTCCAGCTCCGCCGCATCTTCACTCTTCACTCCA
JMFN038G04+ GTCGATAGCCATTCCAGCTCCGCCGCATCTTCACTCTTCACTCCA
JMFN014L14+ GTCGATAGCCATTCCAGCTCCGCCGCATCTTCACTCTTCACTCCATCCACACAACAAAAC
____________________________________________________________
consensus GTCGATAGCCATTCCAGCTCCGCCGCATCTTCACTCTTCACTCCATCCACACAACAAAAC