Contig 013025:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024O01Sequence474013025 (4)gb|KHN19052.1|8e-42Basic form of pathogenesis-related protein 1 [Glycine soja]
JMFN013E10Sequence642013025 (4)ref|XP_011092436.1|1e-52PREDICTED: basic form of pathogenesis-related protein 1-like [Sesamum indicum]
JMFN030C13Sequence640013025 (4)ref|XP_011092436.1|2e-52PREDICTED: basic form of pathogenesis-related protein 1-like [Sesamum indicum]
JMFN032M10Sequence514013025 (4)ref|XP_011092436.1|2e-44PREDICTED: basic form of pathogenesis-related protein 1-like [Sesamum indicum]

Alignment

This contig is upended


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JMFN030C13+                                             AATTTGTTTCATAATAATATATACAT
                      ____________________________________________________________
consensus                                               AATTTGTTTCATAATAATATATACAT
 
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JMFN030C13+           CAGATATGATATTCTAATTTATTATTNTTTTATAATGCATGCATTGTGTACATTTCACAA
JMFN013E10+                             TTATTATTTTTTTATAATGCATGCATTGTGTGCATTTCACAA
                      ____________________________________________________________
consensus             CAGATATGATATTCTAATTTATTATTTTTTTATAATGCATGCATTGTGTGCATTTCACAA
 
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JMFN030C13+           AATAAAAAAAGTAAGTAAATTGTAGGTGTAGGTTTAATAAGGTTTTTGGCCGGCATAGTT
JMFN013E10+           AATAAAAAAAGTAAGTAAATTGTAGGTGTAGGTTTAATAAGGTTTTTGGCCGGCATAGTT
                      ____________________________________________________________
consensus             AATAAAAAAAGTAAGTAAATTGTAGGTGTAGGTTTAATAAGGTTTTTGGCCGGCATAGTT
 
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JMFN030C13+           ACCGGGAGGGTAATAGTTGCAAGTGACGAACATCCAACCAGTCTTGCATGTAGCCCTAGC
rJMFF024O01-                                      AACATCCAACCAGTCTTGCATGTAGCCCTAGC
JMFN032M10+                         AGTTGCAAGTGACGAACATCCAACCAGTCTTGCATGTAGCCCTAGC
JMFN013E10+           ACCGGGAGGGTAATAGTTGCAAGTGACGAACATCCAACCAGTCTTGCATGTAGCCCTAGC
                      ____________________________________________________________
consensus             ACCGGGAGGGTAATAGTTGCAAGTGACGAACATCCAACCAGTCTTGCATGTAGCCCTAGC
 
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JMFN030C13+           ACAACCAATAGTGGTGGTGTTGCCCCAAACCACTTGCGTATAATGGAGGCACTCTTGGCT
rJMFF024O01-          ACAACCAATAGTGGTGGTGTTGCCCCAAACCACTTGCGTATAATGGAGGCACTCTTGGCT
JMFN032M10+           ACAACCAATAGTGGTGGTGTTGCCCCAAACCACTTGCGTATAATGGAGGCACTCTTGGCT
JMFN013E10+           ACAACCAATAGTGGTGGTGTTGCCCCAAACCACTTGCGTATAATGGAGGCACTCTTGGCT
                      ____________________________________________________________
consensus             ACAACCAATAGTGGTGGTGTTGCCCCAAACCACTTGCGTATAATGGAGGCACTCTTGGCT
 
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JMFN030C13+           GACGCAAGCATTGGTATTGTGGTTATAGTATGGCTTCTCATCCATCCACAACTTCACAGA
rJMFF024O01-          GACGCAAGCATTGGTATTGTGGTTATAGTATGGCTTCTCATCCATCCACAACTTCACAGA
JMFN032M10+           GACGCAAGCATTGGTATTGTGGTTATAGTATGGCTTCTCATCCATCCACAACTTCACAGA
JMFN013E10+           GACGCAAGCATTGGTATTGTGGTTATAGTATGGCTTCTCATCCATCCACAACTTCACAGA
                      ____________________________________________________________
consensus             GACGCAAGCATTGGTATTGTGGTTATAGTATGGCTTCTCATCCATCCACAACTTCACAGA
 
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JMFN030C13+           AGCCTCCGCAGACAATTCAGAACCGGCCATCGCGATGTTTTCGCCGTACGGCCCTCCTGA
rJMFF024O01-          AGCCTCCGCAGACAATTCAGAACCGGCCATCGCGATGTTTTCGCCGTACGGCCCTCCTGA
JMFN032M10+           AGCCTCCGCAGACAATTCAGAACCGGCCATCGCGATGTTTTCGCCGTACGGCCCTCCTGA
JMFN013E10+           AGCCTCCGCAGACAATTCAGAACCGGCCATCGCGATGTTTTCGCCGTACGGCCCTCCTGA
                      ____________________________________________________________
consensus             AGCCTCCGCAGACAATTCAGAACCGGCCATCGCGATGTTTTCGCCGTACGGCCCTCCTGA
 
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JMFN030C13+           GTGCTCCAGCAAACAGTCGGCAGCCCTCTTGGTGGCATAGGATTCCGCATATTCTGCTAA
rJMFF024O01-          GTGCTCCAGCAAACAGTCGGCAGCCCTCTTGGTGGCATAGGATTCCGCATATTCTGCTAA
JMFN032M10+           GTGCTCCAGCAAACAGTCGGCAGCCCTCTTGGTGGCATAGGATTCCGCATATTCTGCTAA
JMFN013E10+           GTGCTCCAGCAAACAGTCGGCAGCCCTCTTGGTGGCATAGGATTCCGCATATTCTGCTAA
                      ____________________________________________________________
consensus             GTGCTCCAGCAAACAGTCGGCAGCCCTCTTGGTGGCATAGGATTCCGCATATTCTGCTAA
 
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JMFN030C13+           GGTGGTGTTCCACTTAAGAGGTGGACTACCAACAGCTTCTCGTGCTTTGTTATGTGCAGC
rJMFF024O01-          GGTGGTGTTCCACTTAAGAGGTGGACTACCAACAGCTTCTCGTGCTTTGTTATGTGCAGC
JMFN032M10+           GGTGGTGTTCCACTTAAGAGGTGGACTACCAACAGCTTCTCGTGCTTTGTTATGTGCAGC
JMFN013E10+           GGTGGTGTTCCACTTAAGAGGTGGACTACCAACAGCTTCTCGTGCTTTGTTATGTGCAGC
                      ____________________________________________________________
consensus             GGTGGTGTTCCACTTAAGAGGTGGACTACCAACAGCTTCTCGTGCTTTGTTATGTGCAGC
 
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JMFN030C13+           AAGAAACCCTTCAATGCAGCCAGAATCACAGGCCGACTCTCCAAAAGATGCCTGGCTAAT
rJMFF024O01-          AAGAAACCCTTCAATGCAGCCAGAATCACAGGCCGACTCTCCAAAAGATGCCTGGCTAAT
JMFN032M10+           AAGAAACCCTTCAATGCAGCCAGAATCACAGGCCGACTCTCCAAAAGATGCCTGGCTAAT
JMFN013E10+           AAGAAACCCTTCAATGCAGCCAGAATCACAGGCCGACTCTCCAAAAGATGCCTGGCTAAT
                      ____________________________________________________________
consensus             AAGAAACCCTTCAATGCAGCCAGAATCACAGGCCGACTCTCCAAAAGATGCCTGGCTAAT
 
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JMFN030C13+           AGCGGCTAACCCAATTATATTTATGGCCACACACACCTGCAGAAAAGAAAACTCCCCCAT
rJMFF024O01-          AGCGGCTAACCCAATTATATTTATGGCCACACACACCTGCAGAAAAGAAAACTCCCCCAT
JMFN032M10+           AGCGGCTAACCCAATTATATTTATGGCCACACACACCTGCAGAAAAGAAAACTCCCCCAT
JMFN013E10+           AGCGGCTAACCCAATTATATTTATGGCCACACACACCTGCAGAAAAGAAAACTCCCCCAT
                      ____________________________________________________________
consensus             AGCGGCTAACCCAATTATATTTATGGCCACACACACCTGCAGAAAAGAAAACTCCCCCAT
 
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JMFN030C13+           TTCTTCTTTCGATC                                              
rJMFF024O01-          TTCTTCTTTCGATC                                              
JMFN032M10+           TTCTTCTTTCGATC                                              
JMFN013E10+           TTCTTCTTTCGATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTCTTATGATCGATCGA
                      ____________________________________________________________
consensus             TTCTTCTTTCGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCTTATGATCGATCGA