Contig 013020:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF032N09-                                            ATATTGAATTCAAATTATAAATTTAA
rJMFF006P11-                                                       AAATTATAAATTTAA
                      ____________________________________________________________
consensus                                               ATATTGAATTCAAATTATAAATTTAA
 
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rJMFF032N09-          CACAAGAAATGTGATTTACAGATAATATAGATATTTTATGAACACTACCAGTCTGCTAGA
rJMFF006P11-          CACAAGAAATGTGATTTACAGATAATATAGATATTTTATGAACACTACCAGTCTGCTAGA
                      ____________________________________________________________
consensus             CACAAGAAATGTGATTTACAGATAATATAGATATTTTATGAACACTACCAGTCTGCTAGA
 
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rJMFF032N09-          CTCTTAAGTCTTATCTGTACAAGTCAAAGAAGCCGTGCTCCACATCTTGGCGCGTGGATA
rJMFF006P11-          CTCTTAAGTCTTATCTGTACAAGTCAAAGAAGCCGTGCTCCACATCTTGGCGCGTGGATA
                      ____________________________________________________________
consensus             CTCTTAAGTCTTATCTGTACAAGTCAAAGAAGCCGTGCTCCACATCTTGGCGCGTGGATA
 
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rJMFF032N09-          TGTTTCCACCGTTTCATTCATACGTGCCATGTCACAATCAGCTCAAATTGTCACTGACAG
rJMFF006P11-          TGTTTCCACCGTTTCATTCATACGTGCCATGTCACAATCAGCTCAAATTGTCACTGACAG
                      ____________________________________________________________
consensus             TGTTTCCACCGTTTCATTCATACGTGCCATGTCACAATCAGCTCAAATTGTCACTGACAG
 
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rJMFF032N09-          GTCACCCAGAATTAGGCAAAATCACCTCGGTGTTGGGATCTTTGGACGAGTCAACTCGCT
rJMFF006P11-          GTCACCCAGAATTAGGCAAAATCACCTCGGTGTTGGGATCTTTGGACGAGTCAACTCGCT
                      ____________________________________________________________
consensus             GTCACCCAGAATTAGGCAAAATCACCTCGGTGTTGGGATCTTTGGACGAGTCAACTCGCT
 
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rJMFF032N09-          CACGCAACCGCCTCCGCCGCATTCCAAGTCAAACTCGGTGGACAGCGGCAACGGAGTACT
rJMFF006P11-          CACGCAACCGCCTCCGCCGCATTCCAAGTCAAACTCGGTGGACAGCGGCAACGGAGTACT
                      ____________________________________________________________
consensus             CACGCAACCGCCTCCGCCGCATTCCAAGTCAAACTCGGTGGACAGCGGCAACGGAGTACT
 
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rJMFF032N09-          GGGCCCACTAGGAGTTCTCTTGTTCATACTCAGTATTCTCTTCAACGACAACAACCGGCT
rJMFF006P11-          GGGCCCACTAGGAGTTCTCTTGTTCATACTCAGTATTCTCTTCAACGACAACAACCGGCT
                      ____________________________________________________________
consensus             GGGCCCACTAGGAGTTCTCTTGTTCATACTCAGTATTCTCTTCAACGACAACAACCGGCT
 
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rJMFF032N09-          CCCCGGCGACCGGAACCCGCAACTCGCGGGTGAACTCAGTGAGAACTCAGGATCTAACTC
rJMFF006P11-          CCCCGGCGACCGGAACCCGCAACTCGCGGGTGAACTCAGTGAGAACTCAGGATCTAACTC
                      ____________________________________________________________
consensus             CCCCGGCGACCGGAACCCGCAACTCGCGGGTGAACTCAGTGAGAACTCAGGATCTAACTC
 
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rJMFF032N09-          GTTCCGTGCCGGCACCTCTACTCTCACTCCGGTCAAATCCACACCCTTTCTCCGGGAACC
rJMFF006P11-          GTTCCGTGCCGGCACCTCTACTCTCACTCCGGTCAAATCCACACCCTTTCTCCGGGAACC
                      ____________________________________________________________
consensus             GTTCCGTGCCGGCACCTCTACTCTCACTCCGGTCAAATCCACACCCTTTCTCCGGGAACC
 
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rJMFF032N09-          CAAAGACGACGTCGTGGGCCCATTTACCTCGCTGCACAACCCAGAACTCGAACCGGGTTC
rJMFF006P11-          CAAAGACGACGTCGTGGGCCCATTTACCTCGCTGCACAACCCAGAACTCGAACCGGGTTC
                      ____________________________________________________________
consensus             CAAAGACGACGTCGTGGGCCCATTTACCTCGCTGCACAACCCAGAACTCGAACCGGGTTC
 
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rJMFF032N09-          TGCCCAGTTTCCGGCCACCGGTTCATTCACTTTAACGTTAACGACCGTCTCATCCGGTCC
rJMFF006P11-          TGCCCAGTTTCCGGCCACCGGTTCATTCACTTTAACGTTAACGACCGTCTCATCCGGT-C
JMFF032N09+                                                                      C
                      ____________________________________________________________
consensus             TGCCCAGTTTCCGGCCACCGGTTCATTCACTTTAACGTTAACGACCGTCTCATCCGGTCC
 
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rJMFF032N09-          CGTGGAACGCTTCAACCGGAGAGCGGCAAAGCGGGCAAGTAGAGTGAGAATGAAACCACA
rJMFF006P11-          CGTGGAACGCTTCAACCGGAGAGCGGCAAAGCGGGCAAGTAGAGTGAGAATGAAACCACA
JMFF032N09+           CGTGGAACGCTTCAACCGGAGAGCGGCAAAGCGGGCAAGTAGAGTGAGAATGAAACCACA
JMFF006P11+                            GGAGAGCGGCAAAGCGGGCAAGTAGAGTGAGAATGAANCCACA
JMFN011D01+                                          CGGGCAAGTAGAGTGAGAATGAAACCACA
                      ____________________________________________________________
consensus             CGTGGAACGCTTCAACCGGAGAGCGGCAAAGCGGGCAAGTAGAGTGAGAATGAAACCACA
 
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rJMFF032N09-          TATCAATACATTCAGTGTGAA                                       
rJMFF006P11-          TATCAATACATTCAGTGTGAAAAGAGTGGTTACACTTGGGCAAAAACCGGCCCTTCTCGT
JMFF032N09+           TATCAATACATTCAGTGTGAAAAGAGTGGTTACACTTGGGCAAAAGCCGGCCCTTCTCGT
JMFF006P11+           TATCAATACATTCAGTGTGAAAAGAGTGGTTACACTTGGGCAAAAACCGGCCCTTNTCGT
JMFN011D01+           TATCAATACATTCAGTGTGAAAAGAGTGGTTACAC-TGGGCAAAAGCCGGCCCTTCTCGT
                      ____________________________________________________________
consensus             TATCAATACATTCAGTGTGAAAAGAGTGGTTACACTTGGGCAAAAACCGGCCCTTCTCGT
 
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rJMFF006P11-          TATCCTCAAACTCCGCCAAGCACACGGCGCATTCCA                        
JMFF032N09+           TATCCTCAAACTCCGCCAAGCACACGGCGCATTCCACCGGCTCGGTCCGGTCCTTGGACG
JMFF006P11+           TATCCTCAAACTCCGCCAAGCACACGGCGCATTCCACCGGCTCGGTCCGGTCCTTGGACG
JMFN011D01+           TATCCTCAAACTCCGCCAAGCACACGGCGCATTCCACCGGCTCGGTCCGGTCCTTGGACG
                      ____________________________________________________________
consensus             TATCCTCAAACTCCGCCAAGCACACGGCGCATTCCACCGGCTCGGTCCGGTCCTTGGACG
 
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JMFF032N09+           AGTACTCGAAAACCGGCAGCGACCCAATCACGGCCGCTTCGAGCCCACGGCTGGCGGCGG
JMFF006P11+           AGTACTCGAAAACCGGCAGCGACCCAATCACGGCCGCTTCGAGCCCACGGCTGGCGGCGG
JMFN011D01+           AGTACTCGAAAACCGGCAGCGACCCAATCACGGCCGCTTCGAGCCCACGGCTGGCGGCGG
                      ____________________________________________________________
consensus             AGTACTCGAAAACCGGCAGCGACCCAATCACGGCCGCTTCGAGCCCACGGCTGGCGGCGG
 
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JMFF032N09+           CCTGGTTATCATCAACATAGAACACAATCTGAGCGCGTCGGTTCCGACTGCGCCTACGGC
JMFF006P11+           CCTGGTTATCATCAACATAGAACACAATCTGAGCGCGTCGGTTCCGACTGCGCCTACGGC
JMFN011D01+           CCTGGTTATCATCAACATAGAACACAATCTGAGCGCGTCGGTTCCGACTGCGCCTACGGC
                      ____________________________________________________________
consensus             CCTGGTTATCATCAACATAGAACACAATCTGAGCGCGTCGGTTCCGACTGCGCCTACGGC
 
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JMFF032N09+           GGA-GCTCCCGGCGGCGCTGACGGAGGAGATACCACCGCGCGTAGAGATGCAGCACCACA
JMFF006P11+           GGAGGCTCCCGGCGGCGCTGACGGAGGAGATACCACCGCGCGTAGAGATGCAGCACCACA
JMFN011D01+           GGA-GCTCCCGGCGGCGCTGACGGAGGAGATACCAACGCGCGTAGAGATGCAGCACCACA
                      ____________________________________________________________
consensus             GGA-GCTCCCGGCGGCGCTGACGGAGGAGATACCACCGCGCGTAGAGATGCAGCACCACA
 
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JMFF032N09+           ATAAAAACCACGACGGCGAACAAAATCACTATGGCGCTCAGCATAATTTTCCCTCCCAGC
JMFF006P11+           ATAAAAACCACGACGGCGAACAAAATCACTATGGCGCTCAGCATAATTTTCCCTCCCAGC
JMFN011D01+           ATAAAAACCACGACGGCGAACAAAATCACTATGGCGCTCAGCATAATTTTCCCTCCCAGC
                      ____________________________________________________________
consensus             ATAAAAACCACGACGGCGAACAAAATCACTATGGCGCTCAGCATAATTTTCCCTCCCAGC
 
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JMFF032N09+           TCGTATCCGTTGGACGTATTTTGCTCCACCATAGGAACCTCGATCGGCATATCCTGGCGA
JMFF006P11+           TCGTATCCGTTGGACGTATTTTGCTCCACCATAGGAACCTCGATCGGCATATCCTGGCGA
JMFN011D01+           TCGTATCCGTTGGACGTATTTTGCTCCACCATAGGAACCTCGATCGGCATATCCTGGCGA
                      ____________________________________________________________
consensus             TCGTATCCGTTGGACGTATTTTGCTCCACCATAGGAACCTCGATCGGCATATCCTGGCGA
 
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JMFF032N09+           TTATTCACTCCCATCTCGAAGGTCGGAAAAGTGAAATTCTCATTAGGAGCCATTAGGACT
JMFF006P11+           TTATTCACTCCCATCTCGAAGGTCGGAAAAGTGAAATTCTCATTAGGAGCCATTAGGACT
JMFN011D01+           TTATTCACTCCCATCTCGAAGGTCGGAAAAGTGAAATTCTCATTAGGAGCCATTAGGACT
                      ____________________________________________________________
consensus             TTATTCACTCCCATCTCGAAGGTCGGAAAAGTGAAATTCTCATTAGGAGCCATTAGGACT
 
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JMFF032N09+           TGGTTTTAGAGAGAGAAGACTGAGAAAGAGAGATAGGGAGAGAGAAC             
JMFF006P11+           TGGTTTTAGAGAGAGAAGACTGAGAAAGAGAGATAGGGAGAGAGAAC             
JMFN011D01+           TGGTTTTAGAGAGAGAAGACTGAGAAAGAGAGATAGGGAGAGAGAACGAATGAAAATGGA
                      ____________________________________________________________
consensus             TGGTTTTAGAGAGAGAAGACTGAGAAAGAGAGATAGGGAGAGAGAACGAATGAAAATGGA
 
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JMFN011D01+           GAAATACTGATGGTGATAAAAGAGGGGGACATGGGAAAGTTTTTGGAAGGGTTTGGTTGA
                      ____________________________________________________________
consensus             GAAATACTGATGGTGATAAAAGAGGGGGACATGGGAAAGTTTTTGGAAGGGTTTGGTTGA